Search results for the GEO ID: GSE19471 |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM485220 | GPL570 |
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BM-MSC_rep 1
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BM-MSC from patient
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cell type: BM-MSC
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BM-MSC from patient
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Sample_geo_accession | GSM485220
| Sample_status | Public on Oct 02 2010
| Sample_submission_date | Dec 14 2009
| Sample_last_update_date | Oct 02 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | All human MSCs used for experiment were cultured in the MesenCultTM medium in the presence of 5% CO2, or in Dulbecco's modified Eagle's medium DMEM supplemented with 10% fetal bovine serum . For BM-MSCs isolation, the mononuclear fraction of bone marrow was isolated by Histopaque-1077 gradient (1077-1; Sigma, USA), and plated in culture medium. Non-adherent cells were abandoned on next day
| Sample_extract_protocol_ch1 | Total RNA were extracted by RNeasy mini kit (Cat. 74106; Qiagen, Hilden, Germany), and 100 ng to 1 ug of total RNA were subjected into reverse transcription using the SuperScriptTM III Reverse transcriptase kit (Invitrogen) as directed by the manufacturer.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | RMA through R based affy module
| Sample_platform_id | GPL570
| Sample_contact_name | Wei-Lun,,Hwang
| Sample_contact_email | a85296658@yahoo.com.tw
| Sample_contact_department | Institute of biochemistry and molecular biology
| Sample_contact_institute | National Yang-Ming University
| Sample_contact_address | No.155, Sec.2, Linong Street
| Sample_contact_city | Taipei
| Sample_contact_zip/postal_code | 112
| Sample_contact_country | Taiwan
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM485nnn/GSM485220/suppl/GSM485220.cel.gz
| Sample_series_id | GSE19471
| Sample_data_row_count | 54675
| |
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GSM485221 | GPL570 |
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BM-MSC_rep 2
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BM-MSC from patient
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cell type: BM-MSC
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BM-MSC from patient
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Sample_geo_accession | GSM485221
| Sample_status | Public on Oct 02 2010
| Sample_submission_date | Dec 14 2009
| Sample_last_update_date | Oct 02 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | All human MSCs used for experiment were cultured in the MesenCultTM medium in the presence of 5% CO2, or in Dulbecco's modified Eagle's medium DMEM supplemented with 10% fetal bovine serum . For BM-MSCs isolation, the mononuclear fraction of bone marrow was isolated by Histopaque-1077 gradient (1077-1; Sigma, USA), and plated in culture medium. Non-adherent cells were abandoned on next day
| Sample_extract_protocol_ch1 | Total RNA were extracted by RNeasy mini kit (Cat. 74106; Qiagen, Hilden, Germany), and 100 ng to 1 ug of total RNA were subjected into reverse transcription using the SuperScriptTM III Reverse transcriptase kit (Invitrogen) as directed by the manufacturer.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | RMA through R based affy module
| Sample_platform_id | GPL570
| Sample_contact_name | Wei-Lun,,Hwang
| Sample_contact_email | a85296658@yahoo.com.tw
| Sample_contact_department | Institute of biochemistry and molecular biology
| Sample_contact_institute | National Yang-Ming University
| Sample_contact_address | No.155, Sec.2, Linong Street
| Sample_contact_city | Taipei
| Sample_contact_zip/postal_code | 112
| Sample_contact_country | Taiwan
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM485nnn/GSM485221/suppl/GSM485221.cel.gz
| Sample_series_id | GSE19471
| Sample_data_row_count | 54675
| |
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GSM485222 | GPL570 |
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BM-MSC_rep 3
|
BM-MSC from patient
|
cell type: BM-MSC
|
BM-MSC from patient
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Sample_geo_accession | GSM485222
| Sample_status | Public on Oct 02 2010
| Sample_submission_date | Dec 14 2009
| Sample_last_update_date | Oct 02 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | All human MSCs used for experiment were cultured in the MesenCultTM medium in the presence of 5% CO2, or in Dulbecco's modified Eagle's medium DMEM supplemented with 10% fetal bovine serum . For BM-MSCs isolation, the mononuclear fraction of bone marrow was isolated by Histopaque-1077 gradient (1077-1; Sigma, USA), and plated in culture medium. Non-adherent cells were abandoned on next day
| Sample_extract_protocol_ch1 | Total RNA were extracted by RNeasy mini kit (Cat. 74106; Qiagen, Hilden, Germany), and 100 ng to 1 ug of total RNA were subjected into reverse transcription using the SuperScriptTM III Reverse transcriptase kit (Invitrogen) as directed by the manufacturer.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | RMA through R based affy module
| Sample_platform_id | GPL570
| Sample_contact_name | Wei-Lun,,Hwang
| Sample_contact_email | a85296658@yahoo.com.tw
| Sample_contact_department | Institute of biochemistry and molecular biology
| Sample_contact_institute | National Yang-Ming University
| Sample_contact_address | No.155, Sec.2, Linong Street
| Sample_contact_city | Taipei
| Sample_contact_zip/postal_code | 112
| Sample_contact_country | Taiwan
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM485nnn/GSM485222/suppl/GSM485222.cel.gz
| Sample_series_id | GSE19471
| Sample_data_row_count | 54675
| |
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GSM485223 | GPL570 |
|
BM-MSC_rep 4
|
BM-MSC from patient
|
cell type: BM-MSC
|
BM-MSC from patient
|
Sample_geo_accession | GSM485223
| Sample_status | Public on Oct 02 2010
| Sample_submission_date | Dec 14 2009
| Sample_last_update_date | Oct 02 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | All human MSCs used for experiment were cultured in the MesenCultTM medium in the presence of 5% CO2, or in Dulbecco's modified Eagle's medium DMEM supplemented with 10% fetal bovine serum . For BM-MSCs isolation, the mononuclear fraction of bone marrow was isolated by Histopaque-1077 gradient (1077-1; Sigma, USA), and plated in culture medium. Non-adherent cells were abandoned on next day
| Sample_extract_protocol_ch1 | Total RNA were extracted by RNeasy mini kit (Cat. 74106; Qiagen, Hilden, Germany), and 100 ng to 1 ug of total RNA were subjected into reverse transcription using the SuperScriptTM III Reverse transcriptase kit (Invitrogen) as directed by the manufacturer.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | RMA through R based affy module
| Sample_platform_id | GPL570
| Sample_contact_name | Wei-Lun,,Hwang
| Sample_contact_email | a85296658@yahoo.com.tw
| Sample_contact_department | Institute of biochemistry and molecular biology
| Sample_contact_institute | National Yang-Ming University
| Sample_contact_address | No.155, Sec.2, Linong Street
| Sample_contact_city | Taipei
| Sample_contact_zip/postal_code | 112
| Sample_contact_country | Taiwan
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM485nnn/GSM485223/suppl/GSM485223.CEL.gz
| Sample_series_id | GSE19471
| Sample_data_row_count | 54675
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