Search results for the GEO ID: GSE19778  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM493930 | GPL1261 |
|
adult 10 week old, biological rep 1, TG
|
adult kidney
|
tissue: kidney
developmental stage: adult
age: 10 weeks
gender: male
genome/variation: expressing the soluble intracellular domain of megalin
|
gene expression profile from adult kidney
|
| Sample_geo_accession | GSM493930
| | Sample_status | Public on Jan 01 2011
| | Sample_submission_date | Jan 07 2010
| | Sample_last_update_date | Jan 01 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followewd by Proteinase K digestion and purification using the RNeasy-Mini-Kit from Qiagen.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standart protocol from Affymetrix (1999-2004) Synthesis of Biotin-labeled cRNA for both the One-Cycle and Two-Cycle Targeting labeling assay.
| | Sample_hyb_protocol | Following fragmentation the Eukaryotic Target Hybridization protocol from Affymetrix was used.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 7G from Affymetrix.
| | Sample_data_processing | The data were analysed using R/Bioconductor and normalized using the RMA function with the “fast” option disabled.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Thomas,E,Willnow
| | Sample_contact_email | willnow@mdc-berlin.de
| | Sample_contact_laboratory | AG Willnow
| | Sample_contact_institute | Max Delbrück Center for Molecular Medicine (MDC)
| | Sample_contact_address | Robert-Rössle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_state | Berlin
| | Sample_contact_zip/postal_code | D-13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM493nnn/GSM493930/suppl/GSM493930.CEL.gz
| | Sample_series_id | GSE19778
| | Sample_data_row_count | 45101
| | |
|
GSM493931 | GPL1261 |
|
adult 10 week old, biological rep 2, TG
|
adult kidney
|
tissue: kidney
developmental stage: adult
age: 10 weeks
gender: male
genome/variation: expressing the intracellular domain of megalin
|
gene expression profile from adult kidney
|
| Sample_geo_accession | GSM493931
| | Sample_status | Public on Jan 01 2011
| | Sample_submission_date | Jan 07 2010
| | Sample_last_update_date | Jan 01 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followewd by Proteinase K digestion and purification using the RNeasy-Mini-Kit from Qiagen.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standart protocol from Affymetrix (1999-2004) Synthesis of Biotin-labeled cRNA for both the One-Cycle and Two-Cycle Targeting labeling assay.
| | Sample_hyb_protocol | Following fragmentation the Eukaryotic Target Hybridization protocol from Affymetrix was used.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 7G from Affymetrix.
| | Sample_data_processing | The data were analysed using R/Bioconductor and normalized using the RMA function with the “fast” option disabled.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Thomas,E,Willnow
| | Sample_contact_email | willnow@mdc-berlin.de
| | Sample_contact_laboratory | AG Willnow
| | Sample_contact_institute | Max Delbrück Center for Molecular Medicine (MDC)
| | Sample_contact_address | Robert-Rössle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_state | Berlin
| | Sample_contact_zip/postal_code | D-13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM493nnn/GSM493931/suppl/GSM493931.CEL.gz
| | Sample_series_id | GSE19778
| | Sample_data_row_count | 45101
| | |
|
GSM493932 | GPL1261 |
|
adult 10 week old, biological rep 3, TG
|
adult kidney
|
tissue: kidney
developmental stage: adult
age: 10 weeks
gender: male
genome/variation: expressing the intracellular domain of megalin
|
gene expression profile from adult kidney
|
| Sample_geo_accession | GSM493932
| | Sample_status | Public on Jan 01 2011
| | Sample_submission_date | Jan 07 2010
| | Sample_last_update_date | Jan 01 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followewd by Proteinase K digestion and purification using the RNeasy-Mini-Kit from Qiagen.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standart protocol from Affymetrix (1999-2004) Synthesis of Biotin-labeled cRNA for both the One-Cycle and Two-Cycle Targeting labeling assay.
| | Sample_hyb_protocol | Following fragmentation the Eukaryotic Target Hybridization protocol from Affymetrix was used.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 7G from Affymetrix.
| | Sample_data_processing | The data were analysed using R/Bioconductor and normalized using the RMA function with the “fast” option disabled.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Thomas,E,Willnow
| | Sample_contact_email | willnow@mdc-berlin.de
| | Sample_contact_laboratory | AG Willnow
| | Sample_contact_institute | Max Delbrück Center for Molecular Medicine (MDC)
| | Sample_contact_address | Robert-Rössle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_state | Berlin
| | Sample_contact_zip/postal_code | D-13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM493nnn/GSM493932/suppl/GSM493932.CEL.gz
| | Sample_series_id | GSE19778
| | Sample_data_row_count | 45101
| | |
|
GSM493933 | GPL1261 |
|
adult 10 week old, biological rep 1, WT
|
adult kidney
|
tissue: kidney
developmental stage: adult
age: 10 weeks
gender: male
genome/variation: wild type
|
gene expression profile from adult kidney
|
| Sample_geo_accession | GSM493933
| | Sample_status | Public on Jan 01 2011
| | Sample_submission_date | Jan 07 2010
| | Sample_last_update_date | Jan 01 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followewd by Proteinase K digestion and purification using the RNeasy-Mini-Kit from Qiagen.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standart protocol from Affymetrix (1999-2004) Synthesis of Biotin-labeled cRNA for both the One-Cycle and Two-Cycle Targeting labeling assay.
| | Sample_hyb_protocol | Following fragmentation the Eukaryotic Target Hybridization protocol from Affymetrix was used.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 7G from Affymetrix.
| | Sample_data_processing | The data were analysed using R/Bioconductor and normalized using the RMA function with the “fast” option disabled.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Thomas,E,Willnow
| | Sample_contact_email | willnow@mdc-berlin.de
| | Sample_contact_laboratory | AG Willnow
| | Sample_contact_institute | Max Delbrück Center for Molecular Medicine (MDC)
| | Sample_contact_address | Robert-Rössle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_state | Berlin
| | Sample_contact_zip/postal_code | D-13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM493nnn/GSM493933/suppl/GSM493933.CEL.gz
| | Sample_series_id | GSE19778
| | Sample_data_row_count | 45101
| | |
|
GSM493934 | GPL1261 |
|
adult 10 week old, biological rep 2, WT
|
adult kidney
|
tissue: kidney
developmental stage: adult
age: 10 weeks
gender: male
genome/variation: wild type
|
gene expression profile from adult kidney
|
| Sample_geo_accession | GSM493934
| | Sample_status | Public on Jan 01 2011
| | Sample_submission_date | Jan 07 2010
| | Sample_last_update_date | Jan 01 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followewd by Proteinase K digestion and purification using the RNeasy-Mini-Kit from Qiagen.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standart protocol from Affymetrix (1999-2004) Synthesis of Biotin-labeled cRNA for both the One-Cycle and Two-Cycle Targeting labeling assay.
| | Sample_hyb_protocol | Following fragmentation the Eukaryotic Target Hybridization protocol from Affymetrix was used.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 7G from Affymetrix.
| | Sample_data_processing | The data were analysed using R/Bioconductor and normalized using the RMA function with the “fast” option disabled.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Thomas,E,Willnow
| | Sample_contact_email | willnow@mdc-berlin.de
| | Sample_contact_laboratory | AG Willnow
| | Sample_contact_institute | Max Delbrück Center for Molecular Medicine (MDC)
| | Sample_contact_address | Robert-Rössle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_state | Berlin
| | Sample_contact_zip/postal_code | D-13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM493nnn/GSM493934/suppl/GSM493934.CEL.gz
| | Sample_series_id | GSE19778
| | Sample_data_row_count | 45101
| | |
|
GSM493935 | GPL1261 |
|
adult 10 week old, biological rep 3, WT
|
adult kidney
|
tissue: kidney
developmental stage: adult
age: 10 weeks
gender: male
genome/variation: wild type
|
gene expression profile from adult kidney
|
| Sample_geo_accession | GSM493935
| | Sample_status | Public on Jan 01 2011
| | Sample_submission_date | Jan 07 2010
| | Sample_last_update_date | Jan 01 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followewd by Proteinase K digestion and purification using the RNeasy-Mini-Kit from Qiagen.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standart protocol from Affymetrix (1999-2004) Synthesis of Biotin-labeled cRNA for both the One-Cycle and Two-Cycle Targeting labeling assay.
| | Sample_hyb_protocol | Following fragmentation the Eukaryotic Target Hybridization protocol from Affymetrix was used.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 7G from Affymetrix.
| | Sample_data_processing | The data were analysed using R/Bioconductor and normalized using the RMA function with the “fast” option disabled.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Thomas,E,Willnow
| | Sample_contact_email | willnow@mdc-berlin.de
| | Sample_contact_laboratory | AG Willnow
| | Sample_contact_institute | Max Delbrück Center for Molecular Medicine (MDC)
| | Sample_contact_address | Robert-Rössle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_state | Berlin
| | Sample_contact_zip/postal_code | D-13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM493nnn/GSM493935/suppl/GSM493935.CEL.gz
| | Sample_series_id | GSE19778
| | Sample_data_row_count | 45101
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