Search results for the GEO ID: GSE19860  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM496015 | GPL570 |
|
Expression data of CC_FL_01
|
Colorecal Cancer, FL_P_01
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496015
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496015/suppl/GSM496015.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496016 | GPL570 |
|
Expression data of CC_FL_02
|
Colorecal Cancer, FL_P_02
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder, BV_Responder
|
FL_Non_responder BV_Responder
|
| Sample_geo_accession | GSM496016
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496016/suppl/GSM496016.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496017 | GPL570 |
|
Expression data of CC_FL_03
|
Colorecal Cancer, FL_P_03
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496017
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496017/suppl/GSM496017.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496018 | GPL570 |
|
Expression data of CC_FL_04
|
Colorecal Cancer, FL_P_04
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496018
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496018/suppl/GSM496018.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496019 | GPL570 |
|
Expression data of CC_FL_05
|
Colorecal Cancer, FL_P_05
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder, BV_Non_reponder
|
FL_Non_responder BV_Non_reponder
|
| Sample_geo_accession | GSM496019
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496019/suppl/GSM496019.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496020 | GPL570 |
|
Expression data of CC_FL_06
|
Colorecal Cancer, FL_P_06
|
tissue: Colorecal Cancer
treatment response: FL_Responder, BV_Non_reponder
|
FL_Responder BV_Non_reponder
|
| Sample_geo_accession | GSM496020
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496020/suppl/GSM496020.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496021 | GPL570 |
|
Expression data of CC_FL_07
|
Colorecal Cancer, FL_P_07
|
tissue: Colorecal Cancer
treatment response: FL_Responder, BV_Responder
|
FL_Responder BV_Responder
|
| Sample_geo_accession | GSM496021
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496021/suppl/GSM496021.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496022 | GPL570 |
|
Expression data of CC_FL_08
|
Colorecal Cancer, FL_P_08
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496022
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496022/suppl/GSM496022.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496023 | GPL570 |
|
Expression data of CC_FL_09
|
Colorecal Cancer, FL_P_09
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder, BV_Responder
|
FL_Non_responder, BV_Responder
|
| Sample_geo_accession | GSM496023
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496023/suppl/GSM496023.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496024 | GPL570 |
|
Expression data of CC_FL_10
|
Colorecal Cancer, FL_P_10
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496024
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496024/suppl/GSM496024.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496025 | GPL570 |
|
Expression data of CC_FL_11
|
Colorecal Cancer, FL_P_11
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496025
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496025/suppl/GSM496025.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496026 | GPL570 |
|
Expression data of CC_FL_14
|
Colorecal Cancer, FL_P_14
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496026
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496026/suppl/GSM496026.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496027 | GPL570 |
|
Expression data of CC_FL_15
|
Colorecal Cancer, FL_P_15
|
tissue: Colorecal Cancer
treatment response: FL_Responder
|
FL_Responder
|
| Sample_geo_accession | GSM496027
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496027/suppl/GSM496027.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496028 | GPL570 |
|
Expression data of CC_FL_16
|
Colorecal Cancer, FL_P_16
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496028
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496028/suppl/GSM496028.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496029 | GPL570 |
|
Expression data of CC_FL_19
|
Colorecal Cancer, FL_P_19
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496029
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496029/suppl/GSM496029.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496030 | GPL570 |
|
Expression data of CC_FL_20
|
Colorecal Cancer, FL_P_20
|
tissue: Colorecal Cancer
treatment response: FL_Responder
|
FL_Responder
|
| Sample_geo_accession | GSM496030
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496030/suppl/GSM496030.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496031 | GPL570 |
|
Expression data of CC_FL_22
|
Colorecal Cancer, FL_P_22
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496031
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496031/suppl/GSM496031.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496032 | GPL570 |
|
Expression data of CC_FL_23
|
Colorecal Cancer, FL_P_23
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder, BV_Non_reponder
|
FL_Non_responder BV_Non_reponder
|
| Sample_geo_accession | GSM496032
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496032/suppl/GSM496032.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496033 | GPL570 |
|
Expression data of CC_FL_24
|
Colorecal Cancer, FL_P_24
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496033
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496033/suppl/GSM496033.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496034 | GPL570 |
|
Expression data of CC_FL_25
|
Colorecal Cancer, FL_P_25
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496034
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496034/suppl/GSM496034.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496035 | GPL570 |
|
Expression data of CC_FL_27
|
Colorecal Cancer, FL_P_27
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496035
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496035/suppl/GSM496035.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496036 | GPL570 |
|
Expression data of CC_FL_28
|
Colorecal Cancer, FL_P_28
|
tissue: Colorecal Cancer
treatment response: FL_Responder, BV_Non_reponder
|
FL_Responder BV_Non_reponder
|
| Sample_geo_accession | GSM496036
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496036/suppl/GSM496036.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496037 | GPL570 |
|
Expression data of CC_FL_30
|
Colorecal Cancer, FL_P_30
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder, BV_Responder
|
FL_Non_responder BV_Responder
|
| Sample_geo_accession | GSM496037
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496037/suppl/GSM496037.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496038 | GPL570 |
|
Expression data of CC_FL_31
|
Colorecal Cancer, FL_P_31
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder
|
FL_Non_responder
|
| Sample_geo_accession | GSM496038
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496038/suppl/GSM496038.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496039 | GPL570 |
|
Expression data of CC_FL_35
|
Colorecal Cancer, FL_P_35
|
tissue: Colorecal Cancer
treatment response: FL_Responder
|
FL_Responder
|
| Sample_geo_accession | GSM496039
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496039/suppl/GSM496039.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496040 | GPL570 |
|
Expression data of CC_FL_36
|
Colorecal Cancer, FL_P_36
|
tissue: Colorecal Cancer
treatment response: FL_Responder, BV_Non_reponder
|
FL_Responder BV_Non_reponder
|
| Sample_geo_accession | GSM496040
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496040/suppl/GSM496040.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496041 | GPL570 |
|
Expression data of CC_FL_37
|
Colorecal Cancer, FL_P_37
|
tissue: Colorecal Cancer
treatment response: FL_Responder, BV_Non_reponder
|
FL_Responder BV_Non_reponder
|
| Sample_geo_accession | GSM496041
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496041/suppl/GSM496041.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496042 | GPL570 |
|
Expression data of CC_FL_38
|
Colorecal Cancer, FL_P_38
|
tissue: Colorecal Cancer
treatment response: FL_Non_responder, BV_Responder
|
FL_Non_responder BV_Responder
|
| Sample_geo_accession | GSM496042
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496042/suppl/GSM496042.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
|
GSM496043 | GPL570 |
|
Expression data of CC_FL_40
|
Colorecal Cancer, FL_P_40
|
tissue: Colorecal Cancer
treatment response: FL_Responder, BV_Non_reponder
|
FL_Responder BV_Non_reponder
|
| Sample_geo_accession | GSM496043
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496043/suppl/GSM496043.CEL.gz
| | Sample_series_id | GSE19860
| | Sample_data_row_count | 54675
| | |
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Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
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