Search results for the GEO ID: GSE19862  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM496059 | GPL570 |
|
Expression data of CC_BV_02
|
Colorecal Cancer, BV_P_02
|
tissue: Colorecal Cancer
treatment response: BV_Responder
|
BV_Responder
|
| Sample_geo_accession | GSM496059
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496059/suppl/GSM496059.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496060 | GPL570 |
|
Expression data of CC_BV_04
|
Colorecal Cancer, BV_P_04
|
tissue: Colorecal Cancer
treatment response: BV_Non-responder
|
BV_Non-responder
|
| Sample_geo_accession | GSM496060
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496060/suppl/GSM496060.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496061 | GPL570 |
|
Expression data of CC_BV_05
|
Colorecal Cancer, BV_P_05
|
tissue: Colorecal Cancer
treatment response: BV_Non-responder
|
BV_Non-responder
|
| Sample_geo_accession | GSM496061
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496061/suppl/GSM496061.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496062 | GPL570 |
|
Expression data of CC_BV_06
|
Colorecal Cancer, BV_P_06
|
tissue: Colorecal Cancer
treatment response: BV_Responder
|
BV_Responder
|
| Sample_geo_accession | GSM496062
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496062/suppl/GSM496062.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496063 | GPL570 |
|
Expression data of CC_BV_09
|
Colorecal Cancer, BV_P_09
|
tissue: Colorecal Cancer
treatment response: BV_Responder
|
BV_Responder
|
| Sample_geo_accession | GSM496063
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496063/suppl/GSM496063.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496064 | GPL570 |
|
Expression data of CC_FL_9
|
Colorecal Cancer, FL_P_9
|
tissue: Colorecal Cancer
treatment response: BV_Responder, FL_Non_Responder
|
BV_Responder, FL_Non_Responder
|
| Sample_geo_accession | GSM496064
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496064/suppl/GSM496064.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496065 | GPL570 |
|
Expression data of CC_BV_11
|
Colorecal Cancer, BV_P_11
|
tissue: Colorecal Cancer
treatment response: BV_Non-responder
|
BV_Non-responder
|
| Sample_geo_accession | GSM496065
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496065/suppl/GSM496065.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496066 | GPL570 |
|
Expression data of CC_BV_12
|
Colorecal Cancer, BV_P_12
|
tissue: Colorecal Cancer
treatment response: BV_Non-responder
|
BV_Non-responder
|
| Sample_geo_accession | GSM496066
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496066/suppl/GSM496066.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496068 | GPL570 |
|
Expression data of CC_BV_13
|
Colorecal Cancer, BV_P_13
|
tissue: Colorecal Cancer
treatment response: BV_Non-responder
|
BV_Non-responder
|
| Sample_geo_accession | GSM496068
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496068/suppl/GSM496068.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496069 | GPL570 |
|
Expression data of CC_BV_14
|
Colorecal Cancer, BV_P_14
|
tissue: Colorecal Cancer
treatment response: BV_Responder
|
BV_Responder
|
| Sample_geo_accession | GSM496069
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496069/suppl/GSM496069.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496070 | GPL570 |
|
Expression data of CC_BV_15
|
Colorecal Cancer, BV_P_15
|
tissue: Colorecal Cancer
treatment response: BV_Responder
|
BV_Responder
|
| Sample_geo_accession | GSM496070
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496070/suppl/GSM496070.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496072 | GPL570 |
|
Expression data of CC_BV_16
|
Colorecal Cancer, BV_P_16
|
tissue: Colorecal Cancer
treatment response: BV_Non-responder
|
BV_Non-responder
|
| Sample_geo_accession | GSM496072
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496072/suppl/GSM496072.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
| | |
|
GSM496074 | GPL570 |
|
Expression data of CC_BV_17
|
Colorecal Cancer, BV_P_17
|
tissue: Colorecal Cancer
treatment response: BV_Non-responder
|
BV_Non-responder
|
| Sample_geo_accession | GSM496074
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496074/suppl/GSM496074.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
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GSM496075 | GPL570 |
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Expression data of CC_BV_21
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Colorecal Cancer, BV_P_21
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tissue: Colorecal Cancer
treatment response: BV_Responder
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BV_Responder
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| Sample_geo_accession | GSM496075
| | Sample_status | Public on Jan 03 2013
| | Sample_submission_date | Jan 12 2010
| | Sample_last_update_date | Jan 03 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0, PerChip/PerGene normalization
| | Sample_platform_id | GPL570
| | Sample_contact_name | Toshiaki,,Watanabe
| | Sample_contact_email | toshwatanabe@yahoo.co.jp
| | Sample_contact_phone | 81-3-5800-8653
| | Sample_contact_fax | 81-3-3811-6822
| | Sample_contact_department | Department of Surgical Oncology
| | Sample_contact_institute | University of Tokyo
| | Sample_contact_address | 7-3-1, Hongo
| | Sample_contact_city | Bunkyo-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 113-8655
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM496nnn/GSM496075/suppl/GSM496075.CEL.gz
| | Sample_series_id | GSE19862
| | Sample_data_row_count | 54675
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