Search results for the GEO ID: GSE20011  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM499721 | GPL570 |
|
L428_1
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499721
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499721/suppl/GSM499721.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499722 | GPL570 |
|
L1236_1
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499722
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499722/suppl/GSM499722.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499723 | GPL570 |
|
KM-H2_1
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499723
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499723/suppl/GSM499723.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499724 | GPL570 |
|
HDLM2_1
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499724
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499724/suppl/GSM499724.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499725 | GPL570 |
|
L540
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499725
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499725/suppl/GSM499725.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499726 | GPL570 |
|
L540Cy
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499726
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499726/suppl/GSM499726.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499727 | GPL570 |
|
Reh_1
|
lymphoid cell line
|
malignancy (disease state): B acute lymphoblastic leukemia
|
n/a
|
| Sample_geo_accession | GSM499727
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499727/suppl/GSM499727.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499728 | GPL570 |
|
Namalwa_1
|
lymphoid cell line
|
malignancy (disease state): Burkitt lymphoma
|
n/a
|
| Sample_geo_accession | GSM499728
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499728/suppl/GSM499728.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499729 | GPL570 |
|
L428_2
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499729
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499729/suppl/GSM499729.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499730 | GPL570 |
|
L1236_2
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499730
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499730/suppl/GSM499730.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499731 | GPL570 |
|
KM-H2_2
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499731
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499731/suppl/GSM499731.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499732 | GPL570 |
|
HDLM2_2
|
lymphoid cell line
|
malignancy (disease state): classical Hodgkin Lymphoma
|
n/a
|
| Sample_geo_accession | GSM499732
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499732/suppl/GSM499732.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499733 | GPL570 |
|
Reh_2
|
lymphoid cell line
|
malignancy (disease state): B acute lymphoblastic leukemia
|
n/a
|
| Sample_geo_accession | GSM499733
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499733/suppl/GSM499733.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499734 | GPL570 |
|
Namalwa_2
|
lymphoid cell line
|
malignancy (disease state): Burkitt lymphoma
|
n/a
|
| Sample_geo_accession | GSM499734
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499734/suppl/GSM499734.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
|
GSM499735 | GPL570 |
|
SU-DHL-4
|
lymphoid cell line
|
malignancy (disease state): B non Hodgkin lymphoma
|
n/a
|
| Sample_geo_accession | GSM499735
| | Sample_status | Public on Nov 17 2010
| | Sample_submission_date | Jan 22 2010
| | Sample_last_update_date | Nov 17 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNeasy Mini-Kit from QIAGEN according to the manufacturer's recommendations.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_hyb_protocol | Hybridization was done according to the manufacturer's recommendations (Affymetrix).
| | Sample_scan_protocol | Scanning was done according to the manufacturer's recommendations (Affymetrix). Scanner Model was GeneChip® Scanner 3000 7G, GeneChip® Command Console® 2.0.1 was used as software.
| | Sample_data_processing | Raw data were background corrected with RMA and normalized using quantile normalization. All processeing was done in R/Bioconductor.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Koechert
| | Sample_contact_email | karl.koechert@mdc-berlin.de
| | Sample_contact_institute | Max-Delbrueck-Centre for Molecular Medicine
| | Sample_contact_address | Robert-Roessle-Str. 10
| | Sample_contact_city | Berlin
| | Sample_contact_zip/postal_code | 13125
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM499nnn/GSM499735/suppl/GSM499735.CEL.gz
| | Sample_series_id | GSE20011
| | Sample_data_row_count | 54675
| | |
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