Search results for the GEO ID: GSE20433  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM512460 | GPL570 |
|
DMSO-1
|
LNCaP, DMSO
|
cell line: LNCaP
drug treatment: DMSO
transfection: none
|
Gene expression data from LNCaP cells treated with 0.1% DMSO for 24 h.
|
| Sample_geo_accession | GSM512460
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells treated with 0.1% DMSO for 24 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512460/suppl/GSM512460.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512461 | GPL570 |
|
DMSO-2
|
LNCaP, DMSO
|
cell line: LNCaP
drug treatment: DMSO
transfection: none
|
Gene expression data from LNCaP cells treated with 0.1% DMSO for 24 h.
|
| Sample_geo_accession | GSM512461
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells treated with 0.1% DMSO for 24 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512461/suppl/GSM512461.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512462 | GPL570 |
|
TSA-1
|
LNCaP, TSA
|
cell line: LNCaP
drug treatment: TSA
transfection: none
|
Gene expression data from LNCaP cells treated with 5 uM TSA for 24 h.
|
| Sample_geo_accession | GSM512462
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells treated with 5 uM TSA for 24 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512462/suppl/GSM512462.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512463 | GPL570 |
|
TSA-2
|
LNCaP, TSA
|
cell line: LNCaP
drug treatment: TSA
transfection: none
|
Gene expression data from LNCaP cells treated with 5 uM TSA for 24 h.
|
| Sample_geo_accession | GSM512463
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells treated with 5 uM TSA for 24 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512463/suppl/GSM512463.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512464 | GPL570 |
|
Roscovitine-1
|
LNCaP, Roscovitine
|
cell line: LNCaP
drug treatment: Roscovitine
transfection: none
|
Gene expression data from LNCaP cells treated with 10 uM Roscovitine for 24 h.
|
| Sample_geo_accession | GSM512464
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells treated with 10 uM Roscovitine for 24 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512464/suppl/GSM512464.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512465 | GPL570 |
|
Roscovitine-2
|
LNCaP, Roscovitine
|
cell line: LNCaP
drug treatment: Roscovitine
transfection: none
|
Gene expression data from LNCaP cells treated with 10 uM Roscovitine for 24 h.
|
| Sample_geo_accession | GSM512465
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells treated with 10 uM Roscovitine for 24 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512465/suppl/GSM512465.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512466 | GPL570 |
|
si-Control-1
|
LNCaP, si-Control
|
cell line: LNCaP
drug treatment: none
transfection: si-Control
|
Gene expression data from LNCaP cells transfected with control si-RNA for 60 h.
|
| Sample_geo_accession | GSM512466
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells transfected with control si-RNA for 60 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512466/suppl/GSM512466.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512467 | GPL570 |
|
si-Control-2
|
LNCaP, si-Control
|
cell line: LNCaP
drug treatment: none
transfection: si-Control
|
Gene expression data from LNCaP cells transfected with control si-RNA for 60 h.
|
| Sample_geo_accession | GSM512467
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells transfected with control si-RNA for 60 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512467/suppl/GSM512467.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512468 | GPL570 |
|
si-EZH2-1
|
LNCaP, si-EZH2
|
cell line: LNCaP
drug treatment: none
transfection: si-EZH2
|
Gene expression data from LNCaP cells transfected with si-EZH2 for 60 h.
|
| Sample_geo_accession | GSM512468
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells transfected with si-EZH2 for 60 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512468/suppl/GSM512468.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512469 | GPL570 |
|
si-EZH2-2
|
LNCaP, si-EZH2
|
cell line: LNCaP
drug treatment: none
transfection: si-EZH2
|
Gene expression data from LNCaP cells transfected with si-EZH2 for 60 h.
|
| Sample_geo_accession | GSM512469
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells transfected with si-EZH2 for 60 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512469/suppl/GSM512469.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512470 | GPL570 |
|
si-EZH2&EZH2sr-1
|
LNCaP, si-EZH2&EZH2sr
|
cell line: LNCaP
drug treatment: none
transfection: si-EZH2&EZH2sr
|
Gene expression data from LNCaP cells transfected with si-EZH2&EZH2sr for 60 h.
|
| Sample_geo_accession | GSM512470
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells transfected with si-EZH2&EZH2sr for 60 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512470/suppl/GSM512470.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512471 | GPL570 |
|
si-EZH2&EZH2sr-2
|
LNCaP, si-EZH2&EZH2sr
|
cell line: LNCaP
drug treatment: none
transfection: si-EZH2&EZH2sr
|
Gene expression data from LNCaP cells transfected with si-EZH2&EZH2sr for 60 h.
|
| Sample_geo_accession | GSM512471
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells transfected with si-EZH2&EZH2sr for 60 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512471/suppl/GSM512471.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
| | |
|
GSM512472 | GPL570 |
|
si-EZH2&T350Asr-1
|
LNCaP, si-EZH2&T350Asr
|
cell line: LNCaP
drug treatment: none
transfection: si-EZH2&T350Asr
|
Gene expression data from LNCaP cells transfected with si-EZH2&T350Asr for 60 h.
|
| Sample_geo_accession | GSM512472
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells transfected with si-EZH2&T350Asr for 60 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512472/suppl/GSM512472.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
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GSM512473 | GPL570 |
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si-EZH2&T350Asr-2
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LNCaP, si-EZH2&T350Asr
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cell line: LNCaP
drug treatment: none
transfection: si-EZH2&T350Asr
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Gene expression data from LNCaP cells transfected with si-EZH2&T350Asr for 60 h.
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| Sample_geo_accession | GSM512473
| | Sample_status | Public on Nov 02 2010
| | Sample_submission_date | Feb 19 2010
| | Sample_last_update_date | Nov 02 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells transfected with si-EZH2&T350Asr for 60 h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the Qiagen RNeasy kit (Qiagen Inc.).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_hyb_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_scan_protocol | Standard Affymetrix Protocols (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001).
| | Sample_data_processing | Normalized by dChip software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Shuai,,Chen
| | Sample_contact_email | chenx495@umn.edu
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | MMC 806, 420 Delaware Street S.E.
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM512nnn/GSM512473/suppl/GSM512473.CEL.gz
| | Sample_series_id | GSE20433
| | Sample_data_row_count | 54613
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Make groups for comparisons |
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| Select GSMs and click on "Add groups" |
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