Search results for the GEO ID: GSE20514  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM515362 | GPL1261 |
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dorsal skin of wild type animal, biological rep1
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mouse skin p16
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tissue: dorsal skin from wildtype
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gene expression data from norrmal skin tissue
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| Sample_geo_accession | GSM515362
| | Sample_status | Public on Apr 16 2010
| | Sample_submission_date | Feb 24 2010
| | Sample_last_update_date | Apr 16 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from wild type and BG skin using TRIzol (Invitrogen, Carlsbad, CA) and then purified using the RNeasy Mini kit (Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was subjected to the standard Affymetrix labeling protocol to obtain biotinylated cRNA.
| | Sample_hyb_protocol | Biotinylated cRNA were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip® Scanner.
| | Sample_data_processing | MAS5.0 algorithm in the Affy package of Bioconductor in the R statistical computing enviroment was used to generate expression summary values, followed by trimmed mean global normalization.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | SATRAJIT ,,SINHA
| | Sample_contact_email | SSINHA2@BUFFALO.EDU
| | Sample_contact_institute | SUNY AT bUFFALO
| | Sample_contact_address | 701 ELLICOTT STREET
| | Sample_contact_city | BUFFALO
| | Sample_contact_zip/postal_code | 14203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM515nnn/GSM515362/suppl/GSM515362.CEL.gz
| | Sample_series_id | GSE20514
| | Sample_data_row_count | 45101
| | |
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GSM515363 | GPL1261 |
|
dorsal skin of wild type animal, biological rep2
|
mouse skin p16
|
tissue: dorsal skin from wildtype
|
gene expression data from norrmal skin tissue
|
| Sample_geo_accession | GSM515363
| | Sample_status | Public on Apr 16 2010
| | Sample_submission_date | Feb 24 2010
| | Sample_last_update_date | Apr 16 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from wild type and BG skin using TRIzol (Invitrogen, Carlsbad, CA) and then purified using the RNeasy Mini kit (Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was subjected to the standard Affymetrix labeling protocol to obtain biotinylated cRNA.
| | Sample_hyb_protocol | Biotinylated cRNA were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip® Scanner.
| | Sample_data_processing | MAS5.0 algorithm in the Affy package of Bioconductor in the R statistical computing enviroment was used to generate expression summary values, followed by trimmed mean global normalization.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | SATRAJIT ,,SINHA
| | Sample_contact_email | SSINHA2@BUFFALO.EDU
| | Sample_contact_institute | SUNY AT bUFFALO
| | Sample_contact_address | 701 ELLICOTT STREET
| | Sample_contact_city | BUFFALO
| | Sample_contact_zip/postal_code | 14203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM515nnn/GSM515363/suppl/GSM515363.CEL.gz
| | Sample_series_id | GSE20514
| | Sample_data_row_count | 45101
| | |
|
GSM515364 | GPL1261 |
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dorsal skin of bitransgenic animal, biological rep1
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mouse skin p16
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tissue: dorsal skin from deltaNp63alpha overexpressing animals
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gene expression data from BG skin tissue
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| Sample_geo_accession | GSM515364
| | Sample_status | Public on Apr 16 2010
| | Sample_submission_date | Feb 24 2010
| | Sample_last_update_date | Apr 16 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from wild type and BG skin using TRIzol (Invitrogen, Carlsbad, CA) and then purified using the RNeasy Mini kit (Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was subjected to the standard Affymetrix labeling protocol to obtain biotinylated cRNA.
| | Sample_hyb_protocol | Biotinylated cRNA were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip® Scanner.
| | Sample_data_processing | MAS5.0 algorithm in the Affy package of Bioconductor in the R statistical computing enviroment was used to generate expression summary values, followed by trimmed mean global normalization.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | SATRAJIT ,,SINHA
| | Sample_contact_email | SSINHA2@BUFFALO.EDU
| | Sample_contact_institute | SUNY AT bUFFALO
| | Sample_contact_address | 701 ELLICOTT STREET
| | Sample_contact_city | BUFFALO
| | Sample_contact_zip/postal_code | 14203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM515nnn/GSM515364/suppl/GSM515364.CEL.gz
| | Sample_series_id | GSE20514
| | Sample_data_row_count | 45101
| | |
|
GSM515365 | GPL1261 |
|
dorsal skin of bitransgenic animal, biological rep2
|
mouse skin p16
|
tissue: dorsal skin from deltaNp63alpha overexpressing animals
|
gene expression data from BG skin tissue
|
| Sample_geo_accession | GSM515365
| | Sample_status | Public on Apr 16 2010
| | Sample_submission_date | Feb 24 2010
| | Sample_last_update_date | Apr 16 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from wild type and BG skin using TRIzol (Invitrogen, Carlsbad, CA) and then purified using the RNeasy Mini kit (Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was subjected to the standard Affymetrix labeling protocol to obtain biotinylated cRNA.
| | Sample_hyb_protocol | Biotinylated cRNA were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip® Scanner.
| | Sample_data_processing | MAS5.0 algorithm in the Affy package of Bioconductor in the R statistical computing enviroment was used to generate expression summary values, followed by trimmed mean global normalization.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | SATRAJIT ,,SINHA
| | Sample_contact_email | SSINHA2@BUFFALO.EDU
| | Sample_contact_institute | SUNY AT bUFFALO
| | Sample_contact_address | 701 ELLICOTT STREET
| | Sample_contact_city | BUFFALO
| | Sample_contact_zip/postal_code | 14203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM515nnn/GSM515365/suppl/GSM515365.CEL.gz
| | Sample_series_id | GSE20514
| | Sample_data_row_count | 45101
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