Search results for the GEO ID: GSE20527  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM515594 | GPL1261 |
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Control
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murine R1 ES cells, untreated
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cell line: R1
cell type: embryonic stem cells
differentiation state: undifferentiated
treatment: untreated
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3 samples:
Untreated control, R1 ES cells
BMP4 (20ng/ml) 4h, R1 ES cells
Noggin (100ng/ml) 4h, R1 ES cells
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| Sample_geo_accession | GSM515594
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Feb 25 2010
| | Sample_last_update_date | Feb 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Undifferentiated R1 ES cells were untreated.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen RNeasy Mini Kit according to the manufacturer's guidelines Label protocol Standard Affymetrix procedures.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix procedures
| | Sample_hyb_protocol | Standard Affymetrix procedures
| | Sample_scan_protocol | Standard Affymetrix procedures using confocal laser scanner.
| | Sample_data_processing | Signal intensity were normalized with RMA algorithm
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Bing,,Zhou
| | Sample_contact_email | bzhou@genetics.ac.cn
| | Sample_contact_phone | 8610-64845797
| | Sample_contact_fax | 8610-64845797
| | Sample_contact_laboratory | Laboratory of Jing-Dong Jackie Han
| | Sample_contact_department | Center for Molecular Systems Biology
| | Sample_contact_institute | Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
| | Sample_contact_address | Datun Road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100101
| | Sample_contact_country | China
| | Sample_contact_web_link | hanlab.genetics.ac.cn
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM515nnn/GSM515594/suppl/GSM515594.CEL.gz
| | Sample_series_id | GSE20527
| | Sample_data_row_count | 45101
| | |
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GSM515597 | GPL1261 |
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BMP4
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murine R1 ES cells, treated with BMP4
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cell line: R1
cell type: embryonic stem cells
differentiation state: undifferentiated
treatment: BMP4
treatment time: 4 hours
|
3 samples:
Untreated control, R1 ES cells
BMP4 (20ng/ml) 4h, R1 ES cells
Noggin (100ng/ml) 4h, R1 ES cells
|
| Sample_geo_accession | GSM515597
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Feb 25 2010
| | Sample_last_update_date | Feb 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Undifferentiated R1 ES cells were treated for 4 h with 20ng/ml BMP4.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen RNeasy Mini Kit according to the manufacturer's guidelines Label protocol Standard Affymetrix procedures.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix procedures
| | Sample_hyb_protocol | Standard Affymetrix procedures
| | Sample_scan_protocol | Standard Affymetrix procedures using confocal laser scanner.
| | Sample_data_processing | Signal intensity were normalized with RMA algorithm
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Bing,,Zhou
| | Sample_contact_email | bzhou@genetics.ac.cn
| | Sample_contact_phone | 8610-64845797
| | Sample_contact_fax | 8610-64845797
| | Sample_contact_laboratory | Laboratory of Jing-Dong Jackie Han
| | Sample_contact_department | Center for Molecular Systems Biology
| | Sample_contact_institute | Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
| | Sample_contact_address | Datun Road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100101
| | Sample_contact_country | China
| | Sample_contact_web_link | hanlab.genetics.ac.cn
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM515nnn/GSM515597/suppl/GSM515597.CEL.gz
| | Sample_series_id | GSE20527
| | Sample_data_row_count | 45101
| | |
|
GSM515599 | GPL1261 |
|
Noggin
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murine R1 ES cells, treated with noggin
|
cell line: R1
cell type: embryonic stem cells
differentiation state: undifferentiated
treatment: noggin
treatment time: 4 hours
|
3 samples:
Untreated control, R1 ES cells
BMP4 (20ng/ml) 4h, R1 ES cells
Noggin (100ng/ml) 4h, R1 ES cells
|
| Sample_geo_accession | GSM515599
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Feb 25 2010
| | Sample_last_update_date | Feb 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Undifferentiated R1 ES cells were treated for 4 h with 100ng/ml noggin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen RNeasy Mini Kit according to the manufacturer's guidelines Label protocol Standard Affymetrix procedures.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix procedures
| | Sample_hyb_protocol | Standard Affymetrix procedures
| | Sample_scan_protocol | Standard Affymetrix procedures using confocal laser scanner.
| | Sample_data_processing | Signal intensity were normalized with RMA algorithm
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Bing,,Zhou
| | Sample_contact_email | bzhou@genetics.ac.cn
| | Sample_contact_phone | 8610-64845797
| | Sample_contact_fax | 8610-64845797
| | Sample_contact_laboratory | Laboratory of Jing-Dong Jackie Han
| | Sample_contact_department | Center for Molecular Systems Biology
| | Sample_contact_institute | Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
| | Sample_contact_address | Datun Road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100101
| | Sample_contact_country | China
| | Sample_contact_web_link | hanlab.genetics.ac.cn
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM515nnn/GSM515599/suppl/GSM515599.CEL.gz
| | Sample_series_id | GSE20527
| | Sample_data_row_count | 45101
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