Search results for the GEO ID: GSE20543  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM516221 | GPL570 |
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LNCaP EV
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LNCaP prostate cells, empty lentivirus vector (control)
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tissue: Prostate
cell line: LNCaP prostate cells
protocol: control
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gene expression
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| Sample_geo_accession | GSM516221
| | Sample_status | Public on Jan 15 2011
| | Sample_submission_date | Feb 26 2010
| | Sample_last_update_date | Jan 15 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells lentiviral transduced with miR-616 or empty vector control
| | Sample_growth_protocol_ch1 | LNCaP cells grown in RPMI medium supplemented with 5% FBS and 1% penicillin and streptomycin
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Service by University Health Network (UHN) Microarray Centre (standard Affymetrix protocol)
| | Sample_hyb_protocol | Service by University Health Network (UHN) Microarray Centre (standard Affymetrix protocol)
| | Sample_scan_protocol | Service by University Health Network (UHN) Microarray Centre (standard Affymetrix protocol)
| | Sample_data_processing | The data were analyzed with RMA using Affymetrix default analysis settings and global scaling as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Stephanie,,Ma
| | Sample_contact_email | stefma@hkucc.hku.hk
| | Sample_contact_department | Pathology and Clinical Oncology
| | Sample_contact_institute | University of Hong Kong
| | Sample_contact_address | Rm 56, 10/F, Lab Block, Faculty of Medicine Bldg, 21 Sassoon Rd, Pok Fu Lam
| | Sample_contact_city | Hong Kong
| | Sample_contact_zip/postal_code | NA
| | Sample_contact_country | Hong Kong
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM516nnn/GSM516221/suppl/GSM516221.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM516nnn/GSM516221/suppl/GSM516221.CHP.gz
| | Sample_series_id | GSE20543
| | Sample_data_row_count | 54675
| | |
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GSM516222 | GPL570 |
|
LNCaP miR-616
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LNCaP prostate cells, miR-616 stably overexpressed using lentivirus
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tissue: Prostate
cell line: LNCaP prostate cells
protocol: miR-616 overexpression
|
gene expression
|
| Sample_geo_accession | GSM516222
| | Sample_status | Public on Jan 15 2011
| | Sample_submission_date | Feb 26 2010
| | Sample_last_update_date | Jan 15 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | LNCaP cells lentiviral transduced with miR-616 or empty vector control
| | Sample_growth_protocol_ch1 | LNCaP cells grown in RPMI medium supplemented with 5% FBS and 1% penicillin and streptomycin
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Service by University Health Network (UHN) Microarray Centre (standard Affymetrix protocol)
| | Sample_hyb_protocol | Service by University Health Network (UHN) Microarray Centre (standard Affymetrix protocol)
| | Sample_scan_protocol | Service by University Health Network (UHN) Microarray Centre (standard Affymetrix protocol)
| | Sample_data_processing | The data were analyzed with RMA using Affymetrix default analysis settings and global scaling as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Stephanie,,Ma
| | Sample_contact_email | stefma@hkucc.hku.hk
| | Sample_contact_department | Pathology and Clinical Oncology
| | Sample_contact_institute | University of Hong Kong
| | Sample_contact_address | Rm 56, 10/F, Lab Block, Faculty of Medicine Bldg, 21 Sassoon Rd, Pok Fu Lam
| | Sample_contact_city | Hong Kong
| | Sample_contact_zip/postal_code | NA
| | Sample_contact_country | Hong Kong
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM516nnn/GSM516222/suppl/GSM516222.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM516nnn/GSM516222/suppl/GSM516222.CHP.gz
| | Sample_series_id | GSE20543
| | Sample_data_row_count | 54675
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