Search results for the GEO ID: GSE21144  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM529453 | GPL1261 |
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Gene expression in CD8α+ SPDCs sample1
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CD8α+ DCs from spleen
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strain: C57BL/6
cell type: CD8a+ SPDCs
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Gene expression data from CD8a+ SPDCs
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| Sample_geo_accession | GSM529453
| | Sample_status | Public on Dec 31 2011
| | Sample_submission_date | Mar 31 2010
| | Sample_last_update_date | Dec 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Satoshi,,Uematsu
| | Sample_contact_email | uemattsu@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-0879-8303
| | Sample_contact_fax | 81-6-0879-8305
| | Sample_contact_department | Department of Host Defense
| | Sample_contact_institute | Research Institute for Microbial Diseases, Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-0871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM529nnn/GSM529453/suppl/GSM529453.CEL.gz
| | Sample_series_id | GSE21144
| | Sample_data_row_count | 45101
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GSM529454 | GPL1261 |
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Gene expression in CD8α+ SPDCs sample2
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CD8a+ SPDCs
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strain: C57BL/6
cell type: CD8a+ SPDCs
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Gene expression data from CD8a+ SPDCs
|
| Sample_geo_accession | GSM529454
| | Sample_status | Public on Dec 31 2011
| | Sample_submission_date | Mar 31 2010
| | Sample_last_update_date | Dec 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Satoshi,,Uematsu
| | Sample_contact_email | uemattsu@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-0879-8303
| | Sample_contact_fax | 81-6-0879-8305
| | Sample_contact_department | Department of Host Defense
| | Sample_contact_institute | Research Institute for Microbial Diseases, Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-0871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM529nnn/GSM529454/suppl/GSM529454.CEL.gz
| | Sample_series_id | GSE21144
| | Sample_data_row_count | 45101
| | |
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GSM529455 | GPL1261 |
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Gene expression in CD8a- SPDCs sample1
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CD8a- SPDCs
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strain: C57BL/6
cell type: CD8a- SPDCs
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Gene expression data from CD8a- SPDCs
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| Sample_geo_accession | GSM529455
| | Sample_status | Public on Dec 31 2011
| | Sample_submission_date | Mar 31 2010
| | Sample_last_update_date | Dec 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Satoshi,,Uematsu
| | Sample_contact_email | uemattsu@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-0879-8303
| | Sample_contact_fax | 81-6-0879-8305
| | Sample_contact_department | Department of Host Defense
| | Sample_contact_institute | Research Institute for Microbial Diseases, Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-0871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM529nnn/GSM529455/suppl/GSM529455.CEL.gz
| | Sample_series_id | GSE21144
| | Sample_data_row_count | 45101
| | |
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GSM529456 | GPL1261 |
|
Gene expression in CD8a- SPDCs sample2
|
CD8a- SPDCs
|
strain: C57BL/6
cell type: CD8a- SPDCs
|
Gene expression data from CD8a- SPDCs
|
| Sample_geo_accession | GSM529456
| | Sample_status | Public on Dec 31 2011
| | Sample_submission_date | Mar 31 2010
| | Sample_last_update_date | Dec 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Satoshi,,Uematsu
| | Sample_contact_email | uemattsu@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-0879-8303
| | Sample_contact_fax | 81-6-0879-8305
| | Sample_contact_department | Department of Host Defense
| | Sample_contact_institute | Research Institute for Microbial Diseases, Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-0871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM529nnn/GSM529456/suppl/GSM529456.CEL.gz
| | Sample_series_id | GSE21144
| | Sample_data_row_count | 45101
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