Search results for the GEO ID: GSE21354  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM492649 | GPL570 |
|
normal tissue,biological rep1
|
pooled normal brain tissue
|
sex: M
age: 34
tissue: pooled normal brain tissue
|
gene expression data from normal brain tissue
|
| Sample_geo_accession | GSM492649
| | Sample_status | Public on Jan 05 2010
| | Sample_submission_date | Jan 04 2010
| | Sample_last_update_date | Apr 15 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640 ,P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492649/suppl/GSM492649_Astrocytomas_N.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492649/suppl/GSM492649_Astrocytomas_N.CHP.gz
| | Sample_series_id | GSE19728
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM492652 | GPL570 |
|
astrocytomas at T2, biological rep1
|
diffusely infiltrating astrocytic gliomas (WHO grade Ⅱ)
|
sex: M
age: 72
tissue: diffusely infiltrating astrocytic gliomas
grade: WHO grade Ⅱ
|
gene expression data from WHO grade Ⅱ astrocytomas pathological resected tissues
|
| Sample_geo_accession | GSM492652
| | Sample_status | Public on Jan 05 2010
| | Sample_submission_date | Jan 04 2010
| | Sample_last_update_date | Apr 15 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640 ,P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492652/suppl/GSM492652_Astrocytomas_T2-1.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492652/suppl/GSM492652_Astrocytomas_T2-1.CHP.gz
| | Sample_series_id | GSE19728
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM492653 | GPL570 |
|
astrocytomas at T2, biological rep2
|
diffusely infiltrating astrocytic gliomas (WHO grade Ⅱ)
|
sex: M
age: 32
tissue: diffusely infiltrating astrocytic gliomas
grade: WHO grade Ⅱ
|
gene expression data from WHO grade Ⅱ astrocytomas pathological resected tissues
|
| Sample_geo_accession | GSM492653
| | Sample_status | Public on Jan 05 2010
| | Sample_submission_date | Jan 04 2010
| | Sample_last_update_date | Apr 15 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640 ,P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492653/suppl/GSM492653_Astrocytomas_T2-2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492653/suppl/GSM492653_Astrocytomas_T2-2.CHP.gz
| | Sample_series_id | GSE19728
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM492654 | GPL570 |
|
astrocytomas at T2, biological rep3
|
diffusely infiltrating astrocytic gliomas (WHO grade Ⅱ)
|
sex: M
age: 73
tissue: diffusely infiltrating astrocytic gliomas
grade: WHO grade Ⅱ
|
gene expression data from WHO grade Ⅱ astrocytomas pathological resected tissues
|
| Sample_geo_accession | GSM492654
| | Sample_status | Public on Jan 05 2010
| | Sample_submission_date | Jan 04 2010
| | Sample_last_update_date | Apr 15 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640 ,P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492654/suppl/GSM492654_Astrocytomas_T2-3.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492654/suppl/GSM492654_Astrocytomas_T2-3.CHP.gz
| | Sample_series_id | GSE19728
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM492655 | GPL570 |
|
astrocytomas at T2, biological rep4
|
diffusely infiltrating astrocytic gliomas (WHO grade Ⅱ)
|
sex: M
age: 45
tissue: diffusely infiltrating astrocytic gliomas
grade: WHO grade Ⅱ
|
gene expression data from WHO grade Ⅱ astrocytomas pathological resected tissues
|
| Sample_geo_accession | GSM492655
| | Sample_status | Public on Jan 05 2010
| | Sample_submission_date | Jan 04 2010
| | Sample_last_update_date | Apr 15 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640 ,P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492655/suppl/GSM492655_Astrocytomas_T2-4.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492655/suppl/GSM492655_Astrocytomas_T2-4.CHP.gz
| | Sample_series_id | GSE19728
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM492656 | GPL570 |
|
astrocytomas at T2, biological rep5
|
diffusely infiltrating astrocytic gliomas (WHO grade Ⅱ)
|
sex: M
age: 65
tissue: diffusely infiltrating astrocytic gliomas
grade: WHO grade Ⅱ
|
gene expression data from WHO grade Ⅱ astrocytomas pathological resected tissues
|
| Sample_geo_accession | GSM492656
| | Sample_status | Public on Jan 05 2010
| | Sample_submission_date | Jan 04 2010
| | Sample_last_update_date | Apr 15 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640 ,P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492656/suppl/GSM492656_Astrocytomas_T2-5.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM492nnn/GSM492656/suppl/GSM492656_Astrocytomas_T2-5.CHP.gz
| | Sample_series_id | GSE19728
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM525014 | GPL570 |
|
normal tissue,biological rep2
|
normal brain tissue
|
tissue: normal brain sample
sex: F
age: 40
|
gene expression data from normal brain tissue
|
| Sample_geo_accession | GSM525014
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Mar 22 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640 ,P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM525nnn/GSM525014/suppl/GSM525014.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM525nnn/GSM525014/suppl/GSM525014.CHP.gz
| | Sample_series_id | GSE19728
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM525015 | GPL570 |
|
normal tissue,biological rep3
|
normal brain tissue
|
tissue: normal brain sample
sex: F
age: 60
|
gene expression data from normal brain tissue
|
| Sample_geo_accession | GSM525015
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Mar 23 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640 ,P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM525nnn/GSM525015/suppl/GSM525015.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM525nnn/GSM525015/suppl/GSM525015.CHP.gz
| | Sample_series_id | GSE19728
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM525016 | GPL570 |
|
normal tissue,biological rep4
|
normal brain tissue
|
tissue: normal brain sample
sex: M
age: 43
|
gene expression data from normal brain tissue
|
| Sample_geo_accession | GSM525016
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Mar 23 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640 ,P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM525nnn/GSM525016/suppl/GSM525016.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM525nnn/GSM525016/suppl/GSM525016.CHP.gz
| | Sample_series_id | GSE19728
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM533622 | GPL570 |
|
ependymomas at T2, biological rep1
|
Ependymomas (WHO grade Ⅱ)
|
tissue: glioma tumor
tumor type: ependymoma
tumor grade: WHO grade II
|
gene expression data from WHO grade Ⅱ ependymomas pathological resected tissues
|
| Sample_geo_accession | GSM533622
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Apr 15 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640, P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533622/suppl/GSM533622.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533622/suppl/GSM533622.CHP.gz
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM533623 | GPL570 |
|
ependymomas at T2, biological rep2
|
Ependymomas (WHO grade Ⅱ)
|
tissue: glioma tumor
tumor type: ependymoma
tumor grade: WHO grade II
|
gene expression data from WHO grade Ⅱ ependymomas pathological resected tissues
|
| Sample_geo_accession | GSM533623
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Apr 15 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640, P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533623/suppl/GSM533623.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533623/suppl/GSM533623.CHP.gz
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM533624 | GPL570 |
|
ependymomas at T2, biological rep3
|
Ependymomas (WHO grade Ⅱ)
|
tissue: glioma tumor
tumor type: ependymoma
tumor grade: WHO grade II
|
gene expression data from WHO grade Ⅱ ependymomas pathological resected tissues
|
| Sample_geo_accession | GSM533624
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Apr 15 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640, P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533624/suppl/GSM533624.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533624/suppl/GSM533624.CHP.gz
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM533625 | GPL570 |
|
ependymomas at T2, biological rep4
|
Ependymomas (WHO grade Ⅱ)
|
tissue: glioma tumor
tumor type: ependymoma
tumor grade: WHO grade II
|
gene expression data from WHO grade Ⅱ ependymomas pathological resected tissues
|
| Sample_geo_accession | GSM533625
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Apr 15 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640, P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533625/suppl/GSM533625.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533625/suppl/GSM533625.CHP.gz
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM533626 | GPL570 |
|
oligodendrogliomas at T2, biological rep1
|
Oligodendrogliomas(WHO grade Ⅱ)
|
tissue: glioma tumor
tumor type: oligodendroglioma
tumor grade: WHO grade II
|
gene expression data from WHO grade Ⅱ oligodendrogliomas pathological resected tissues
|
| Sample_geo_accession | GSM533626
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Apr 15 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640, P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533626/suppl/GSM533626.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533626/suppl/GSM533626.CHP.gz
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM533627 | GPL570 |
|
oligodendrogliomas at T2, biological rep2
|
Oligodendrogliomas(WHO grade Ⅱ)
|
tissue: glioma tumor
tumor type: oligodendroglioma
tumor grade: WHO grade II
|
gene expression data from WHO grade Ⅱ oligodendrogliomas pathological resected tissues
|
| Sample_geo_accession | GSM533627
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Apr 15 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640, P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533627/suppl/GSM533627.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533627/suppl/GSM533627.CHP.gz
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM533628 | GPL570 |
|
oligodendrogliomas at T2, biological rep3
|
Oligodendrogliomas(WHO grade Ⅱ)
|
tissue: glioma tumor
tumor type: oligodendroglioma
tumor grade: WHO grade II
|
gene expression data from WHO grade Ⅱ oligodendrogliomas pathological resected tissues
|
| Sample_geo_accession | GSM533628
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Apr 15 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640, P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533628/suppl/GSM533628.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533628/suppl/GSM533628.CHP.gz
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM533629 | GPL570 |
|
oligodendrogliomas at T2, biological rep4
|
Oligodendrogliomas(WHO grade Ⅱ)
|
tissue: glioma tumor
tumor type: oligodendroglioma
tumor grade: WHO grade II
|
gene expression data from WHO grade Ⅱ oligodendrogliomas pathological resected tissues
|
| Sample_geo_accession | GSM533629
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Apr 15 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640, P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533629/suppl/GSM533629.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533629/suppl/GSM533629.CHP.gz
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
GSM533630 | GPL570 |
|
oligodendrogliomas at T2, biological rep5
|
Oligodendrogliomas(WHO grade Ⅱ)
|
tissue: glioma tumor
tumor type: oligodendroglioma
tumor grade: WHO grade II
|
gene expression data from WHO grade Ⅱ oligodendrogliomas pathological resected tissues
|
| Sample_geo_accession | GSM533630
| | Sample_status | Public on Dec 31 2010
| | Sample_submission_date | Apr 15 2010
| | Sample_last_update_date | Dec 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Use One-Cycle Target Labeling and Control Reagents, Affymetrix, P/N 900493 to label the 3' termini of the fragmentation products.
| | Sample_hyb_protocol | Carry out the hybridization process in a affymetrix hybridazaiton Oven 640, P/N28320.
| | Sample_scan_protocol | Use Affymetrix GeneChip Scaner 3000 controlled by Affymetrix Microarray Suit or GCOS to aquire the hybridization image.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Zhiqiang,,Yao
| | Sample_contact_email | yaozhq11@hotmail.com
| | Sample_contact_phone | 0086-379-63185307
| | Sample_contact_department | Neurosurgery
| | Sample_contact_institute | No.150 Military Central Hospital
| | Sample_contact_address | No.288, Zhongzhou Road
| | Sample_contact_city | Luoyang
| | Sample_contact_state | Henan
| | Sample_contact_zip/postal_code | 471009
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533630/suppl/GSM533630.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM533nnn/GSM533630/suppl/GSM533630.CHP.gz
| | Sample_series_id | GSE21354
| | Sample_data_row_count | 54675
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
Enter the group name here: |
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