Search results for the GEO ID: GSE21573 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM538754 | GPL1355 |
|
Native A7r5 gene expression (1)
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A7r5 vascular smooth muscle cells, native expression complement
|
cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: empty vector
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with empty vector.
|
Sample_geo_accession | GSM538754
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538754/suppl/GSM538754.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538754/suppl/GSM538754.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
|
GSM538755 | GPL1355 |
|
Native A7r5 gene expression (2)
|
A7r5 vascular smooth muscle cells, native expression complement
|
cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: empty vector
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with empty vector.
|
Sample_geo_accession | GSM538755
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538755/suppl/GSM538755.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538755/suppl/GSM538755.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
|
GSM538762 | GPL1355 |
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A7r5 stably transfected with wild-type BMPR2 (1)
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A7r5 vascular SMC stably transfected with wild-type BMPR2
|
cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: wild-type BMPR2
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with wild-type human BMPR2.
|
Sample_geo_accession | GSM538762
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538762/suppl/GSM538762.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538762/suppl/GSM538762.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
|
GSM538763 | GPL1355 |
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A7r5 stably transfected with wild-type BMPR2 (2)
|
A7r5 vascular SMC stably transfected with wild-type BMPR2
|
cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: wild-type BMPR2
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with wild-type human BMPR2.
|
Sample_geo_accession | GSM538763
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538763/suppl/GSM538763.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538763/suppl/GSM538763.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
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GSM538764 | GPL1355 |
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A7r5 stably transfected with CD mutant BMPR2 (1)
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A7r5 vascular SMC stably transfected with CD mutant BMPR2
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cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: CD mutant BMPR2
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with BMPR2 bearing a 2579-2580delT (cytoplasmic tail domain, CD) mutation.
|
Sample_geo_accession | GSM538764
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538764/suppl/GSM538764.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538764/suppl/GSM538764.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
|
GSM538765 | GPL1355 |
|
A7r5 stably transfected with CD mutant BMPR2 (2)
|
A7r5 vascular SMC stably transfected with CD mutant BMPR2
|
cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: CD mutant BMPR2
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with BMPR2 bearing a 2579-2580delT (cytoplasmic tail domain, CD) mutation.
|
Sample_geo_accession | GSM538765
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538765/suppl/GSM538765.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538765/suppl/GSM538765.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
|
GSM538766 | GPL1355 |
|
A7r5 stably transfected with KD mutant BMPR2 (1)
|
A7r5 vascular SMC stably transfected with KD mutant BMPR2
|
cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: KD mutant BMPR2
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with BMPR2 bearing a C994T (kinase domain, KD) mutation.
|
Sample_geo_accession | GSM538766
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538766/suppl/GSM538766.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538766/suppl/GSM538766.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
|
GSM538767 | GPL1355 |
|
A7r5 stably transfected with KD mutant BMPR2 (2)
|
A7r5 vascular SMC stably transfected with KD mutant BMPR2
|
cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: KD mutant BMPR2
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with BMPR2 bearing a C994T (kinase domain, KD) mutation.
|
Sample_geo_accession | GSM538767
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538767/suppl/GSM538767.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538767/suppl/GSM538767.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
|
GSM538792 | GPL1355 |
|
A7r5 stably transfected with ED mutant BMPR2 (1)
|
A7r5 vascular SMC stably transfected with ED mutant BMPR2
|
cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: ED mutant BMPR2
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with BMPR2 bearing a T354G (extracellular domain, ED) mutation.
|
Sample_geo_accession | GSM538792
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538792/suppl/GSM538792.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538792/suppl/GSM538792.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
|
GSM538795 | GPL1355 |
|
A7r5 stably transfected with ED mutant BMPR2 (2)
|
A7r5 vascular SMC stably transfected with ED mutant BMPR2
|
cell line: A7r5
cell type: vascular smooth muscle cells
tranfection: ED mutant BMPR2
|
Normoxic A7r5 vascular smooth muscle cells, approximately 50% confluent in 10% serum + DMEM, stably transfected with BMPR2 bearing a T354G (extracellular domain, ED) mutation.
|
Sample_geo_accession | GSM538795
| Sample_status | Public on Aug 25 2010
| Sample_submission_date | Apr 28 2010
| Sample_last_update_date | May 04 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from freshly cultured A7r5 cells using a Qiagen RNeasy kit.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_hyb_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_scan_protocol | Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Manual).
| Sample_data_processing | Affymetrix CHP and CEL files. Data was normalized using RMA.
| Sample_platform_id | GPL1355
| Sample_contact_name | James,,West
| Sample_contact_email | j.west@vanderbilt.edu
| Sample_contact_laboratory | Pulmonary
| Sample_contact_department | Medicine
| Sample_contact_institute | Vanderbilt University
| Sample_contact_address | 4200 E 9TH Ave, Box B133
| Sample_contact_city | Nashville
| Sample_contact_state | TN
| Sample_contact_zip/postal_code | 37201
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538795/suppl/GSM538795.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM538nnn/GSM538795/suppl/GSM538795.chp.gz
| Sample_series_id | GSE21573
| Sample_data_row_count | 31099
| |
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