Search results for the GEO ID: GSE21887  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM544229 | GPL570 |
|
KUCaP2_AD_1
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: androgen-dependent growth
|
KUCaP2_AD_1
|
| Sample_geo_accession | GSM544229
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544229/suppl/GSM544229.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544230 | GPL570 |
|
KUCaP2_AD_2
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: androgen-dependent growth
|
KUCaP2_AD_2
|
| Sample_geo_accession | GSM544230
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544230/suppl/GSM544230.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544231 | GPL570 |
|
KUCaP2_AD_3
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: androgen-dependent growth
|
KUCaP2_AD_3
|
| Sample_geo_accession | GSM544231
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544231/suppl/GSM544231.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544232 | GPL570 |
|
KUCaP2_AD_4
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: androgen-dependent growth
|
KUCaP2_AD_4
|
| Sample_geo_accession | GSM544232
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544232/suppl/GSM544232.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544233 | GPL570 |
|
KUCaP2_ND_1
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: castration-induced regression nadir
|
KUCaP2_ND_1
|
| Sample_geo_accession | GSM544233
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544233/suppl/GSM544233.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544234 | GPL570 |
|
KUCaP2_ND_2
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: castration-induced regression nadir
|
KUCaP2_ND_2
|
| Sample_geo_accession | GSM544234
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544234/suppl/GSM544234.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544235 | GPL570 |
|
KUCaP2_ND_3
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: castration-induced regression nadir
|
KUCaP2_ND_3
|
| Sample_geo_accession | GSM544235
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544235/suppl/GSM544235.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544236 | GPL570 |
|
KUCaP2_ND_4
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: castration-induced regression nadir
|
KUCaP2_ND_4
|
| Sample_geo_accession | GSM544236
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544236/suppl/GSM544236.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544237 | GPL570 |
|
KUCaP2_CR_1
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: castration-resistant regrowth
|
KUCaP2_CR_1
|
| Sample_geo_accession | GSM544237
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544237/suppl/GSM544237.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544238 | GPL570 |
|
KUCaP2_CR_2
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: castration-resistant regrowth
|
KUCaP2_CR_2
|
| Sample_geo_accession | GSM544238
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544238/suppl/GSM544238.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544239 | GPL570 |
|
KUCaP2_CR_3
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: castration-resistant regrowth
|
KUCaP2_CR_3
|
| Sample_geo_accession | GSM544239
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544239/suppl/GSM544239.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
|
GSM544240 | GPL570 |
|
KUCaP2_CR_4
|
Xenograft tissue
|
tissue type: Human prostate cancer xenograft
stage: castration-resistant regrowth
|
KUCaP2_CR_4
|
| Sample_geo_accession | GSM544240
| | Sample_status | Public on May 19 2010
| | Sample_submission_date | May 18 2010
| | Sample_last_update_date | May 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | According to Affymetrix protocol
| | Sample_data_processing | We used 'RMA' processing algorithm on 'R/Bioconductor'.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Naoki,,Terada
| | Sample_contact_email | nterada@kuhp.kyoto-u.ac.jp
| | Sample_contact_laboratory | Kyoto University
| | Sample_contact_department | Department of Urology
| | Sample_contact_institute | Naoki Terada
| | Sample_contact_address | 54, Shogoinkawahara-cho, Sakyo-ku
| | Sample_contact_city | Kyoto
| | Sample_contact_zip/postal_code | 606-8501
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544240/suppl/GSM544240.CEL.gz
| | Sample_series_id | GSE21887
| | Sample_data_row_count | 54675
| | |
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