Search results for the GEO ID: GSE21905  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM544826 | GPL1261 |
|
C57B/L6 biological rep 1
|
Lineage negative bone marrow cells
|
age: young adult (6-16 weeks)
cell type: Lineage negative bone marrow cells
genetic background: C57B/L6
|
gene expression data from young C57B/L6 lineage negative bone marrow cells selected by FACS to enrich for hematopoietic stem and progenitor cells
|
| Sample_geo_accession | GSM544826
| | Sample_status | Public on May 21 2010
| | Sample_submission_date | May 19 2010
| | Sample_last_update_date | May 20 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | strain comparison; C57B/L6 vs B.D(Chr5)
| | Sample_growth_protocol_ch1 | primary bone marrow from adult female mice, enriched for hematopoietic stem and progenitor cells by negative selection of hematopoietic lineage markers
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extracted with Quiagen Rneasy Mini Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotin-conjugated probes
| | Sample_hyb_protocol | standard hybridization protocol for MG 430 v2.0 Affymetrix Microarray Chip
| | Sample_scan_protocol | Affymetrix GeneArray scanner
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Amanda,,Waterstrat
| | Sample_contact_email | amanda.waterstrat@eku.edu
| | Sample_contact_department | Biological Sciences
| | Sample_contact_institute | Eastern Kentucky University
| | Sample_contact_address | 521 Lancaster Ave
| | Sample_contact_city | Richmond
| | Sample_contact_state | KY
| | Sample_contact_zip/postal_code | 40475
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544826/suppl/GSM544826_1.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544826/suppl/GSM544826_1.CHP.gz
| | Sample_series_id | GSE21905
| | Sample_data_row_count | 45101
| | |
|
GSM544827 | GPL1261 |
|
C57B/L6 biological rep 2
|
Lineage negative bone marrow cells
|
age: young adult (6-16 weeks)
cell type: Lineage negative bone marrow cells
genetic background: C57B/L6
|
gene expression data from young C57B/L6 lineage negative bone marrow cells selected by FACS to enrich for hematopoietic stem and progenitor cells
|
| Sample_geo_accession | GSM544827
| | Sample_status | Public on May 21 2010
| | Sample_submission_date | May 19 2010
| | Sample_last_update_date | May 20 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | strain comparison; C57B/L6 vs B.D(Chr5)
| | Sample_growth_protocol_ch1 | primary bone marrow from adult female mice, enriched for hematopoietic stem and progenitor cells by negative selection of hematopoietic lineage markers
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extracted with Quiagen Rneasy Mini Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotin-conjugated probes
| | Sample_hyb_protocol | standard hybridization protocol for MG 430 v2.0 Affymetrix Microarray Chip
| | Sample_scan_protocol | Affymetrix GeneArray scanner
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Amanda,,Waterstrat
| | Sample_contact_email | amanda.waterstrat@eku.edu
| | Sample_contact_department | Biological Sciences
| | Sample_contact_institute | Eastern Kentucky University
| | Sample_contact_address | 521 Lancaster Ave
| | Sample_contact_city | Richmond
| | Sample_contact_state | KY
| | Sample_contact_zip/postal_code | 40475
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544827/suppl/GSM544827_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544827/suppl/GSM544827_2.CHP.gz
| | Sample_series_id | GSE21905
| | Sample_data_row_count | 45101
| | |
|
GSM544828 | GPL1261 |
|
C57B/L6 biological rep 3
|
Lineage negative bone marrow cells
|
age: young adult (6-16 weeks)
cell type: Lineage negative bone marrow cells
genetic background: C57B/L6
|
gene expression data from young C57B/L6 lineage negative bone marrow cells selected by FACS to enrich for hematopoietic stem and progenitor cells
|
| Sample_geo_accession | GSM544828
| | Sample_status | Public on May 21 2010
| | Sample_submission_date | May 19 2010
| | Sample_last_update_date | May 20 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | strain comparison; C57B/L6 vs B.D(Chr5)
| | Sample_growth_protocol_ch1 | primary bone marrow from adult female mice, enriched for hematopoietic stem and progenitor cells by negative selection of hematopoietic lineage markers
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extracted with Quiagen Rneasy Mini Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotin-conjugated probes
| | Sample_hyb_protocol | standard hybridization protocol for MG 430 v2.0 Affymetrix Microarray Chip
| | Sample_scan_protocol | Affymetrix GeneArray scanner
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Amanda,,Waterstrat
| | Sample_contact_email | amanda.waterstrat@eku.edu
| | Sample_contact_department | Biological Sciences
| | Sample_contact_institute | Eastern Kentucky University
| | Sample_contact_address | 521 Lancaster Ave
| | Sample_contact_city | Richmond
| | Sample_contact_state | KY
| | Sample_contact_zip/postal_code | 40475
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544828/suppl/GSM544828_3.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544828/suppl/GSM544828_3.CHP.gz
| | Sample_series_id | GSE21905
| | Sample_data_row_count | 45101
| | |
|
GSM544829 | GPL1261 |
|
B.D(Chr5) biological rep 1
|
Lineage negative bone marrow cells
|
age: young adult (6-16 weeks)
cell type: Lineage negative bone marrow cells
genetic background: B.D
|
gene expression data from young B.D(Chr5) lineage negative bone marrow cells selected by FACS to enrich for hematopoietic stem and progenitor cells
|
| Sample_geo_accession | GSM544829
| | Sample_status | Public on May 21 2010
| | Sample_submission_date | May 19 2010
| | Sample_last_update_date | May 20 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | strain comparison; C57B/L6 vs B.D(Chr5)
| | Sample_growth_protocol_ch1 | primary bone marrow from adult female mice, enriched for hematopoietic stem and progenitor cells by negative selection of hematopoietic lineage markers
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extracted with Quiagen Rneasy Mini Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotin-conjugated probes
| | Sample_hyb_protocol | standard hybridization protocol for MG 430 v2.0 Affymetrix Microarray Chip
| | Sample_scan_protocol | Affymetrix GeneArray scanner
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Amanda,,Waterstrat
| | Sample_contact_email | amanda.waterstrat@eku.edu
| | Sample_contact_department | Biological Sciences
| | Sample_contact_institute | Eastern Kentucky University
| | Sample_contact_address | 521 Lancaster Ave
| | Sample_contact_city | Richmond
| | Sample_contact_state | KY
| | Sample_contact_zip/postal_code | 40475
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544829/suppl/GSM544829_4.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544829/suppl/GSM544829_4.CHP.gz
| | Sample_series_id | GSE21905
| | Sample_data_row_count | 45101
| | |
|
GSM544830 | GPL1261 |
|
B.D(Chr5) biological rep 2
|
Lineage negative bone marrow cells
|
age: young adult (6-16 weeks)
cell type: Lineage negative bone marrow cells
genetic background: B.D
|
gene expression data from young B.D(Chr5) lineage negative bone marrow cells selected by FACS to enrich for hematopoietic stem and progenitor cells
|
| Sample_geo_accession | GSM544830
| | Sample_status | Public on May 21 2010
| | Sample_submission_date | May 19 2010
| | Sample_last_update_date | May 20 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | strain comparison; C57B/L6 vs B.D(Chr5)
| | Sample_growth_protocol_ch1 | primary bone marrow from adult female mice, enriched for hematopoietic stem and progenitor cells by negative selection of hematopoietic lineage markers
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extracted with Quiagen Rneasy Mini Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotin-conjugated probes
| | Sample_hyb_protocol | standard hybridization protocol for MG 430 v2.0 Affymetrix Microarray Chip
| | Sample_scan_protocol | Affymetrix GeneArray scanner
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Amanda,,Waterstrat
| | Sample_contact_email | amanda.waterstrat@eku.edu
| | Sample_contact_department | Biological Sciences
| | Sample_contact_institute | Eastern Kentucky University
| | Sample_contact_address | 521 Lancaster Ave
| | Sample_contact_city | Richmond
| | Sample_contact_state | KY
| | Sample_contact_zip/postal_code | 40475
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544830/suppl/GSM544830_5.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544830/suppl/GSM544830_5.CHP.gz
| | Sample_series_id | GSE21905
| | Sample_data_row_count | 45101
| | |
|
GSM544831 | GPL1261 |
|
B.D(Chr5) biological rep 3
|
Lineage negative bone marrow cells
|
age: young adult (6-16 weeks)
cell type: Lineage negative bone marrow cells
genetic background: B.D
|
gene expression data from young B.D(Chr5) lineage negative bone marrow cells selected by FACS to enrich for hematopoietic stem and progenitor cells
|
| Sample_geo_accession | GSM544831
| | Sample_status | Public on May 21 2010
| | Sample_submission_date | May 19 2010
| | Sample_last_update_date | May 20 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | strain comparison; C57B/L6 vs B.D(Chr5)
| | Sample_growth_protocol_ch1 | primary bone marrow from adult female mice, enriched for hematopoietic stem and progenitor cells by negative selection of hematopoietic lineage markers
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extracted with Quiagen Rneasy Mini Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotin-conjugated probes
| | Sample_hyb_protocol | standard hybridization protocol for MG 430 v2.0 Affymetrix Microarray Chip
| | Sample_scan_protocol | Affymetrix GeneArray scanner
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Amanda,,Waterstrat
| | Sample_contact_email | amanda.waterstrat@eku.edu
| | Sample_contact_department | Biological Sciences
| | Sample_contact_institute | Eastern Kentucky University
| | Sample_contact_address | 521 Lancaster Ave
| | Sample_contact_city | Richmond
| | Sample_contact_state | KY
| | Sample_contact_zip/postal_code | 40475
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544831/suppl/GSM544831_6.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM544nnn/GSM544831/suppl/GSM544831_6.CHP.gz
| | Sample_series_id | GSE21905
| | Sample_data_row_count | 45101
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|
