Search results for the GEO ID: GSE22035 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM547768 | GPL570 |
|
Normal-ERα-positive breast cancer 2
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 65 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547768
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547768/suppl/GSM547768.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547769 | GPL570 |
|
Normal-ERα-positive breast cancer 3
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 60 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547769
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547769/suppl/GSM547769.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547770 | GPL570 |
|
Normal-ERα-positive breast cancer 4
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 65 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547770
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547770/suppl/GSM547770.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547771 | GPL570 |
|
Normal-ERα-positive breast cancer 5
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 76 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547771
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547771/suppl/GSM547771.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547772 | GPL570 |
|
Mutated-ERα-positive breast cancer 7
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 67 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547772
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547772/suppl/GSM547772.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547773 | GPL570 |
|
Mutated-ERα-positive breast cancer 9
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 72 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547773
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547773/suppl/GSM547773.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547774 | GPL570 |
|
Mutated-ERα-positive breast cancer 10
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 73 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547774
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547774/suppl/GSM547774.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547775 | GPL570 |
|
Mutated-ERα-positive breast cancer 11
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 74 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547775
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547775/suppl/GSM547775.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547776 | GPL570 |
|
Normal-ERα-positive breast cancer 12
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 57 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547776
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547776/suppl/GSM547776.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547777 | GPL570 |
|
Mutated-ERα-positive breast cancer 14
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 69 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547777
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547777/suppl/GSM547777.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547778 | GPL570 |
|
Mutated-ERα-positive breast cancer 17
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 76 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547778
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547778/suppl/GSM547778.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547779 | GPL570 |
|
Normal-ERα-positive breast cancer 24
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 55 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547779
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547779/suppl/GSM547779.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547780 | GPL570 |
|
Normal-ERα-positive breast cancer 25
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 52 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547780
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547780/suppl/GSM547780.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547781 | GPL570 |
|
Normal-ERα-positive breast cancer 26
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 68 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547781
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547781/suppl/GSM547781.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547782 | GPL570 |
|
Normal-ERα-positive breast cancer 27
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 69 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547782
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547782/suppl/GSM547782.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547783 | GPL570 |
|
Mutated-ERα-positive breast cancer 28
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 70 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547783
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547783/suppl/GSM547783.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547784 | GPL570 |
|
Normal-ERα-positive breast cancer 29
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 62 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547784
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547784/suppl/GSM547784.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547785 | GPL570 |
|
Normal-ERα-positive breast cancer 30
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 78 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547785
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547785/suppl/GSM547785.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547786 | GPL570 |
|
Normal-ERα-positive breast cancer 31
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 64 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547786
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547786/suppl/GSM547786.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547787 | GPL570 |
|
Normal-ERα-positive breast cancer 33
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 64 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547787
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547787/suppl/GSM547787.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547788 | GPL570 |
|
Normal-ERα-positive breast cancer 34
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 74 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547788
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547788/suppl/GSM547788.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547789 | GPL570 |
|
Normal-ERα-positive breast cancer 36
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 53 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547789
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547789/suppl/GSM547789.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547790 | GPL570 |
|
Normal-ERα-positive breast cancer 37
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 75 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547790
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547790/suppl/GSM547790.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547791 | GPL570 |
|
Normal-ERα-positive breast cancer 41
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 78 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547791
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547791/suppl/GSM547791.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547792 | GPL570 |
|
Mutated-ERα-positive breast cancer 42
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 79 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547792
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547792/suppl/GSM547792.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547793 | GPL570 |
|
Normal-ERα-positive breast cancer 45
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 61 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547793
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547793/suppl/GSM547793.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547794 | GPL570 |
|
Mutated-ERα-positive breast cancer 46
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 71 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547794
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547794/suppl/GSM547794.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547795 | GPL570 |
|
Normal-ERα-positive breast cancer 47
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 70 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547795
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547795/suppl/GSM547795.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547796 | GPL570 |
|
Normal-ERα-positive breast cancer 49
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 65 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547796
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547796/suppl/GSM547796.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547797 | GPL570 |
|
Normal-ERα-positive breast cancer 50
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 70 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547797
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547797/suppl/GSM547797.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547798 | GPL570 |
|
Normal-ERα-positive breast cancer 51
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 71 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547798
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547798/suppl/GSM547798.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547799 | GPL570 |
|
Mutated-ERα-positive breast cancer 52
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 75 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547799
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547799/suppl/GSM547799.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547800 | GPL570 |
|
Mutated-ERα-positive breast cancer 57
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 46 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547800
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547800/suppl/GSM547800.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547801 | GPL570 |
|
Normal-ERα-positive breast cancer 59
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 73 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547801
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547801/suppl/GSM547801.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547802 | GPL570 |
|
Normal-ERα-positive breast cancer 62
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 70 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547802
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547802/suppl/GSM547802.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547803 | GPL570 |
|
Normal-ERα-positive breast cancer 64
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 53 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547803
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547803/suppl/GSM547803.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547804 | GPL570 |
|
Normal-ERα-positive breast cancer 66
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 62 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547804
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547804/suppl/GSM547804.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547805 | GPL570 |
|
Normal-ERα-positive breast cancer 68
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 74 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547805
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547805/suppl/GSM547805.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547806 | GPL570 |
|
Mutated-ERα-positive breast cancer 69
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 72 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547806
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547806/suppl/GSM547806.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547807 | GPL570 |
|
Mutated-ERα-positive breast cancer 71
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 73 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547807
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547807/suppl/GSM547807.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547808 | GPL570 |
|
Normal-ERα-positive breast cancer 72
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 70 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547808
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547808/suppl/GSM547808.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547809 | GPL570 |
|
Mutated-ERα-positive breast cancer 73
|
ERα-positive breast tumors with PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 65 years
|
Gene expression data from ERα-positive breast tumor with PIK3CA mutation
|
Sample_geo_accession | GSM547809
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547809/suppl/GSM547809.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
GSM547810 | GPL570 |
|
Normal-ERα-positive breast cancer 74
|
ERα-positive breast tumors without PIK3CA mutation
|
tissue: primary unilateral non-metastatic postmenopausal ERα-positive breast tumor
gender: woman
age: 60 years
|
Gene expression data from ERα-positive breast tumor without PIK3CA mutation
|
Sample_geo_accession | GSM547810
| Sample_status | Public on Jan 10 2011
| Sample_submission_date | May 27 2010
| Sample_last_update_date | Jan 10 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | breast tumors were excised from women at the René Huguenin Hospital (Saint-Cloud, France) from 1978 to 2008
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from breast tissue samples by using acid-phenol guanidium method.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA.
| Sample_hyb_protocol | Gene chips were hybridized using standard Affymetrix protocol.
| Sample_scan_protocol | Gene chips were scanned using standard Affymetrix protocol.
| Sample_data_processing | BRB Array tools (version 3.6.0 available on http://linus.nci.nih.gov/BRB-ArrayTools.html) were used to import CEL files applying the Robust Method Average (RMA) normalization and to analyze expression genes.
| Sample_platform_id | GPL570
| Sample_contact_name | clairac,,geraldine
| Sample_contact_email | clairac@crh1.org
| Sample_contact_phone | 33147112310
| Sample_contact_fax | 33147111696
| Sample_contact_laboratory | INSERM U735
| Sample_contact_department | Oncogenetique
| Sample_contact_institute | Centre Rene Huguenin
| Sample_contact_address | 35 rue Daily
| Sample_contact_city | SAINT-CLOUD
| Sample_contact_zip/postal_code | 92210
| Sample_contact_country | France
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547810/suppl/GSM547810.CEL.gz
| Sample_series_id | GSE22035
| Sample_data_row_count | 54675
| |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
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Select GSMs and click on "Add groups" |
Enter the group name here: |
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