Search results for the GEO ID: GSE22039  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM547851 | GPL1261 |
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forelimb of PAX3FKHR rep 1
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forelimb bud of E10.5 Pax3PAX3-FKHR/GFP mouse embryo
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tissue: E10.5 forelimb buds
genotype/variation: Pax3PAX3-FKHR/GFP
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GFP _FKHR1
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| Sample_geo_accession | GSM547851
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | May 28 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | forelimb buds were dissociated by passage through a 2ml syringue and filtered before the flow cytometry sorting
| | Sample_growth_protocol_ch1 | mouse embryos were dissected in DMEM medium and Pax3-GFP fluorescence was viewed under a microscope
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy micro kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | We used the GeneChip Expression Two-Cycle 3'amplification system (Affymetrix)
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Mouse 430_2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner 3000 7G.
| | Sample_data_processing | The data were normalised using the RMA algorithm and significant differences in gene expression were obtained using a LPE statistical test adjusted using the BH multiple correction.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | mounia,,lagha
| | Sample_contact_email | mounia.lagha@gmail.com
| | Sample_contact_institute | Institut Pasteur
| | Sample_contact_address | 25 rue du Dr Roux
| | Sample_contact_city | paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547851/suppl/GSM547851.CEL.gz
| | Sample_series_id | GSE22039
| | Sample_series_id | GSE22041
| | Sample_data_row_count | 45101
| | |
|
GSM547852 | GPL1261 |
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forelimb of PAX3FKHR rep 2
|
forelimb bud of E10.5 Pax3PAX3-FKHR/GFP mouse embryo
|
tissue: E10.5 forelimb buds
genotype/variation: Pax3PAX3-FKHR/GFP
|
GFP _FKHR2
|
| Sample_geo_accession | GSM547852
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | May 28 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | forelimb buds were dissociated by passage through a 2ml syringue and filtered before the flow cytometry sorting
| | Sample_growth_protocol_ch1 | mouse embryos were dissected in DMEM medium and Pax3-GFP fluorescence was viewed under a microscope
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy micro kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | We used the GeneChip Expression Two-Cycle 3'amplification system (Affymetrix)
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Mouse 430_2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner 3000 7G.
| | Sample_data_processing | The data were normalised using the RMA algorithm and significant differences in gene expression were obtained using a LPE statistical test adjusted using the BH multiple correction.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | mounia,,lagha
| | Sample_contact_email | mounia.lagha@gmail.com
| | Sample_contact_institute | Institut Pasteur
| | Sample_contact_address | 25 rue du Dr Roux
| | Sample_contact_city | paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547852/suppl/GSM547852.CEL.gz
| | Sample_series_id | GSE22039
| | Sample_series_id | GSE22041
| | Sample_data_row_count | 45101
| | |
|
GSM547853 | GPL1261 |
|
forelimb of PAX3FKHR rep 3
|
forelimb bud of E10.5 Pax3PAX3-FKHR/GFP mouse embryo
|
tissue: E10.5 forelimb buds
genotype/variation: Pax3PAX3-FKHR/GFP
|
GFP _FKHR3
|
| Sample_geo_accession | GSM547853
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | May 28 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | forelimb buds were dissociated by passage through a 2ml syringue and filtered before the flow cytometry sorting
| | Sample_growth_protocol_ch1 | mouse embryos were dissected in DMEM medium and Pax3-GFP fluorescence was viewed under a microscope
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy micro kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | We used the GeneChip Expression Two-Cycle 3'amplification system (Affymetrix)
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Mouse 430_2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner 3000 7G.
| | Sample_data_processing | The data were normalised using the RMA algorithm and significant differences in gene expression were obtained using a LPE statistical test adjusted using the BH multiple correction.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | mounia,,lagha
| | Sample_contact_email | mounia.lagha@gmail.com
| | Sample_contact_institute | Institut Pasteur
| | Sample_contact_address | 25 rue du Dr Roux
| | Sample_contact_city | paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547853/suppl/GSM547853.CEL.gz
| | Sample_series_id | GSE22039
| | Sample_series_id | GSE22041
| | Sample_data_row_count | 45101
| | |
|
GSM547854 | GPL1261 |
|
forelimb of GFP+ rep 1
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forelimb bud of E10.5 Pax3GFP/+ mouse embryo
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tissue: E10.5 forelimb buds
genotype/variation: Pax3GFP/+
|
GFP+A
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| Sample_geo_accession | GSM547854
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | May 28 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | forelimb buds were dissociated by passage through a 2ml syringue and filtered before the flow cytometry sorting
| | Sample_growth_protocol_ch1 | mouse embryos were dissected in DMEM medium and Pax3-GFP fluorescence was viewed under a microscope
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy micro kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | We used the GeneChip Expression Two-Cycle 3'amplification system (Affymetrix)
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Mouse 430_2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner 3000 7G.
| | Sample_data_processing | The data were normalised using the RMA algorithm and significant differences in gene expression were obtained using a LPE statistical test adjusted using the BH multiple correction.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | mounia,,lagha
| | Sample_contact_email | mounia.lagha@gmail.com
| | Sample_contact_institute | Institut Pasteur
| | Sample_contact_address | 25 rue du Dr Roux
| | Sample_contact_city | paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547854/suppl/GSM547854.CEL.gz
| | Sample_series_id | GSE22039
| | Sample_series_id | GSE22041
| | Sample_data_row_count | 45101
| | |
|
GSM547855 | GPL1261 |
|
forelimb of GFP+ rep 2
|
forelimb bud of E10.5 Pax3GFP/+ mouse embryo
|
tissue: E10.5 forelimb buds
genotype/variation: Pax3GFP/+
|
GFP+C
|
| Sample_geo_accession | GSM547855
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | May 28 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | forelimb buds were dissociated by passage through a 2ml syringue and filtered before the flow cytometry sorting
| | Sample_growth_protocol_ch1 | mouse embryos were dissected in DMEM medium and Pax3-GFP fluorescence was viewed under a microscope
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy micro kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | We used the GeneChip Expression Two-Cycle 3'amplification system (Affymetrix)
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Mouse 430_2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner 3000 7G.
| | Sample_data_processing | The data were normalised using the RMA algorithm and significant differences in gene expression were obtained using a LPE statistical test adjusted using the BH multiple correction.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | mounia,,lagha
| | Sample_contact_email | mounia.lagha@gmail.com
| | Sample_contact_institute | Institut Pasteur
| | Sample_contact_address | 25 rue du Dr Roux
| | Sample_contact_city | paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547855/suppl/GSM547855.CEL.gz
| | Sample_series_id | GSE22039
| | Sample_series_id | GSE22041
| | Sample_data_row_count | 45101
| | |
|
GSM547856 | GPL1261 |
|
forelimb of GFP+ rep 3
|
forelimb bud of E10.5 Pax3GFP/+ mouse embryo
|
tissue: E10.5 forelimb buds
genotype/variation: Pax3GFP/+
|
GFP+D
|
| Sample_geo_accession | GSM547856
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | May 28 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | forelimb buds were dissociated by passage through a 2ml syringue and filtered before the flow cytometry sorting
| | Sample_growth_protocol_ch1 | mouse embryos were dissected in DMEM medium and Pax3-GFP fluorescence was viewed under a microscope
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy micro kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | We used the GeneChip Expression Two-Cycle 3'amplification system (Affymetrix)
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Mouse 430_2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner 3000 7G.
| | Sample_data_processing | The data were normalised using the RMA algorithm and significant differences in gene expression were obtained using a LPE statistical test adjusted using the BH multiple correction.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | mounia,,lagha
| | Sample_contact_email | mounia.lagha@gmail.com
| | Sample_contact_institute | Institut Pasteur
| | Sample_contact_address | 25 rue du Dr Roux
| | Sample_contact_city | paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547856/suppl/GSM547856.CEL.gz
| | Sample_series_id | GSE22039
| | Sample_series_id | GSE22041
| | Sample_data_row_count | 45101
| | |
|
GSM547857 | GPL1261 |
|
forelimb of GFP- rep 1
|
forelimb bud of E10.5 mouse embryo, GFP negative cells
|
tissue: E10.5 forelimb buds
genotype/variation: GFP-
|
GFP-1
|
| Sample_geo_accession | GSM547857
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | May 28 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | forelimb buds were dissociated by passage through a 2ml syringue and filtered before the flow cytometry sorting
| | Sample_growth_protocol_ch1 | mouse embryos were dissected in DMEM medium and Pax3-GFP fluorescence was viewed under a microscope
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy micro kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | We used the GeneChip Expression Two-Cycle 3'amplification system (Affymetrix)
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Mouse 430_2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner 3000 7G.
| | Sample_data_processing | The data were normalised using the RMA algorithm and significant differences in gene expression were obtained using a LPE statistical test adjusted using the BH multiple correction.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | mounia,,lagha
| | Sample_contact_email | mounia.lagha@gmail.com
| | Sample_contact_institute | Institut Pasteur
| | Sample_contact_address | 25 rue du Dr Roux
| | Sample_contact_city | paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547857/suppl/GSM547857.CEL.gz
| | Sample_series_id | GSE22039
| | Sample_series_id | GSE22041
| | Sample_data_row_count | 45101
| | |
|
GSM547858 | GPL1261 |
|
forelimb of GFP- rep 2
|
forelimb bud of E10.5 mouse embryo, GFP negative cells
|
tissue: E10.5 forelimb buds
genotype/variation: GFP-
|
GFP-2
|
| Sample_geo_accession | GSM547858
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | May 28 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | forelimb buds were dissociated by passage through a 2ml syringue and filtered before the flow cytometry sorting
| | Sample_growth_protocol_ch1 | mouse embryos were dissected in DMEM medium and Pax3-GFP fluorescence was viewed under a microscope
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy micro kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | We used the GeneChip Expression Two-Cycle 3'amplification system (Affymetrix)
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Mouse 430_2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner 3000 7G.
| | Sample_data_processing | The data were normalised using the RMA algorithm and significant differences in gene expression were obtained using a LPE statistical test adjusted using the BH multiple correction.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | mounia,,lagha
| | Sample_contact_email | mounia.lagha@gmail.com
| | Sample_contact_institute | Institut Pasteur
| | Sample_contact_address | 25 rue du Dr Roux
| | Sample_contact_city | paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547858/suppl/GSM547858.CEL.gz
| | Sample_series_id | GSE22039
| | Sample_series_id | GSE22041
| | Sample_data_row_count | 45101
| | |
|
GSM547859 | GPL1261 |
|
forelimb of GFP- rep 3
|
forelimb bud of E10.5 mouse embryo, GFP negative cells
|
tissue: E10.5 forelimb buds
genotype/variation: GFP-
|
GFP-3
|
| Sample_geo_accession | GSM547859
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | May 28 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | forelimb buds were dissociated by passage through a 2ml syringue and filtered before the flow cytometry sorting
| | Sample_growth_protocol_ch1 | mouse embryos were dissected in DMEM medium and Pax3-GFP fluorescence was viewed under a microscope
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy micro kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | We used the GeneChip Expression Two-Cycle 3'amplification system (Affymetrix)
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Mouse 430_2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner 3000 7G.
| | Sample_data_processing | The data were normalised using the RMA algorithm and significant differences in gene expression were obtained using a LPE statistical test adjusted using the BH multiple correction.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | mounia,,lagha
| | Sample_contact_email | mounia.lagha@gmail.com
| | Sample_contact_institute | Institut Pasteur
| | Sample_contact_address | 25 rue du Dr Roux
| | Sample_contact_city | paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM547nnn/GSM547859/suppl/GSM547859.CEL.gz
| | Sample_series_id | GSE22039
| | Sample_series_id | GSE22041
| | Sample_data_row_count | 45101
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