Search results for the GEO ID: GSE22086  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM549072 | GPL1261 |
|
wild-type quadriceps, biological rep1
|
wild-type quadriceps
|
genotype/variation: wild-type
strain: C57/BL6
age: 8wks
gender: male
|
Gene expression data from WT quadriceps
|
| Sample_geo_accession | GSM549072
| | Sample_status | Public on Sep 19 2011
| | Sample_submission_date | Jun 02 2010
| | Sample_last_update_date | Sep 19 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Quadriceps muscles were isolated from mice.
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized with MG430 2.0 arrays, washed and processed in accordance with standard Affymetrix protocols.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ruth,T,Yu
| | Sample_contact_laboratory | Ronald Evans
| | Sample_contact_department | Gene Expression Lab
| | Sample_contact_institute | Salk Institute
| | Sample_contact_address | 10010 N Torrey Pines Rd
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92037
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM549nnn/GSM549072/suppl/GSM549072.CEL.gz
| | Sample_series_id | GSE22086
| | Sample_data_row_count | 45101
| | |
|
GSM549073 | GPL1261 |
|
wild-type quadriceps, biological rep2
|
wild-type quadriceps
|
genotype/variation: wild-type
strain: C57/BL6
age: 8wks
gender: male
|
Gene expression data from WT quadriceps
|
| Sample_geo_accession | GSM549073
| | Sample_status | Public on Sep 19 2011
| | Sample_submission_date | Jun 02 2010
| | Sample_last_update_date | Sep 19 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Quadriceps muscles were isolated from mice.
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized with MG430 2.0 arrays, washed and processed in accordance with standard Affymetrix protocols.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ruth,T,Yu
| | Sample_contact_laboratory | Ronald Evans
| | Sample_contact_department | Gene Expression Lab
| | Sample_contact_institute | Salk Institute
| | Sample_contact_address | 10010 N Torrey Pines Rd
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92037
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM549nnn/GSM549073/suppl/GSM549073.CEL.gz
| | Sample_series_id | GSE22086
| | Sample_data_row_count | 45101
| | |
|
GSM549074 | GPL1261 |
|
wild-type quadriceps, biological rep3
|
wild-type quadriceps
|
genotype/variation: wild-type
strain: C57/BL6
age: 8wks
gender: male
|
Gene expression data from WT quadriceps
|
| Sample_geo_accession | GSM549074
| | Sample_status | Public on Sep 19 2011
| | Sample_submission_date | Jun 02 2010
| | Sample_last_update_date | Sep 19 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Quadriceps muscles were isolated from mice.
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized with MG430 2.0 arrays, washed and processed in accordance with standard Affymetrix protocols.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ruth,T,Yu
| | Sample_contact_laboratory | Ronald Evans
| | Sample_contact_department | Gene Expression Lab
| | Sample_contact_institute | Salk Institute
| | Sample_contact_address | 10010 N Torrey Pines Rd
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92037
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM549nnn/GSM549074/suppl/GSM549074.CEL.gz
| | Sample_series_id | GSE22086
| | Sample_data_row_count | 45101
| | |
|
GSM549075 | GPL1261 |
|
ERRgamma transgenic quadriceps, biological rep1
|
ERRgamma transgenic quadriceps
|
genotype/variation: hSkeletal Actin -ERRg transgenic
strain: C57/BL6
age: 8wks
gender: male
|
Gene expression data from ERRg transgenic quadriceps
|
| Sample_geo_accession | GSM549075
| | Sample_status | Public on Sep 19 2011
| | Sample_submission_date | Jun 02 2010
| | Sample_last_update_date | Sep 19 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Quadriceps muscles were isolated from mice.
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized with MG430 2.0 arrays, washed and processed in accordance with standard Affymetrix protocols.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ruth,T,Yu
| | Sample_contact_laboratory | Ronald Evans
| | Sample_contact_department | Gene Expression Lab
| | Sample_contact_institute | Salk Institute
| | Sample_contact_address | 10010 N Torrey Pines Rd
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92037
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM549nnn/GSM549075/suppl/GSM549075.CEL.gz
| | Sample_series_id | GSE22086
| | Sample_data_row_count | 45101
| | |
|
GSM549076 | GPL1261 |
|
ERRgamma transgenic quadriceps, biological rep2
|
ERRgamma transgenic quadriceps
|
genotype/variation: hSkeletal Actin -ERRg transgenic
strain: C57/BL6
age: 8wks
gender: male
|
Gene expression data from ERRg transgenic quadriceps
|
| Sample_geo_accession | GSM549076
| | Sample_status | Public on Sep 19 2011
| | Sample_submission_date | Jun 02 2010
| | Sample_last_update_date | Sep 19 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Quadriceps muscles were isolated from mice.
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized with MG430 2.0 arrays, washed and processed in accordance with standard Affymetrix protocols.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ruth,T,Yu
| | Sample_contact_laboratory | Ronald Evans
| | Sample_contact_department | Gene Expression Lab
| | Sample_contact_institute | Salk Institute
| | Sample_contact_address | 10010 N Torrey Pines Rd
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92037
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM549nnn/GSM549076/suppl/GSM549076.CEL.gz
| | Sample_series_id | GSE22086
| | Sample_data_row_count | 45101
| | |
|
GSM549077 | GPL1261 |
|
ERRgamma transgenic quadriceps, biological rep3
|
ERRgamma transgenic quadriceps
|
genotype/variation: hSkeletal Actin -ERRg transgenic
strain: C57/BL6
age: 8wks
gender: male
|
Gene expression data from ERRg transgenic quadriceps
|
| Sample_geo_accession | GSM549077
| | Sample_status | Public on Sep 19 2011
| | Sample_submission_date | Jun 02 2010
| | Sample_last_update_date | Sep 19 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Quadriceps muscles were isolated from mice.
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized with MG430 2.0 arrays, washed and processed in accordance with standard Affymetrix protocols.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ruth,T,Yu
| | Sample_contact_laboratory | Ronald Evans
| | Sample_contact_department | Gene Expression Lab
| | Sample_contact_institute | Salk Institute
| | Sample_contact_address | 10010 N Torrey Pines Rd
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92037
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM549nnn/GSM549077/suppl/GSM549077.CEL.gz
| | Sample_series_id | GSE22086
| | Sample_data_row_count | 45101
| | |
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