Search results for the GEO ID: GSE22256  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM554054 | GPL570 |
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786-O
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Homo Sapiens
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cell line: 786-O
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Gene expression data was obtained from human kidney tumor cell lines.
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| Sample_geo_accession | GSM554054
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 ug of Qiagen-purified total RNA, R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 7G.
| | Sample_data_processing | The data were analyzed with standard Affymetrix CDF files. The data was processed and normalized with R version 2.10 and Bioconductor version 2.6.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554054/suppl/GSM554054.CEL.gz
| | Sample_series_id | GSE22256
| | Sample_data_row_count | 54613
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GSM554055 | GPL570 |
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786-VHL
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Homo Sapiens
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cell line: 786-VHL
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Gene expression data was obtained from human kidney tumor cell lines.
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| Sample_geo_accession | GSM554055
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 ug of Qiagen-purified total RNA, R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 7G.
| | Sample_data_processing | The data were analyzed with standard Affymetrix CDF files. The data was processed and normalized with R version 2.10 and Bioconductor version 2.6.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554055/suppl/GSM554055.CEL.gz
| | Sample_series_id | GSE22256
| | Sample_data_row_count | 54613
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