Search results for the GEO ID: GSE22263  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM554154 | GPL85 |
|
Rat liver control_52 week_rep1
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: control
|
|
| Sample_geo_accession | GSM554154
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554154/suppl/GSM554154.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554155 | GPL85 |
|
Rat liver control_52 week_rep2
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: control
|
|
| Sample_geo_accession | GSM554155
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554155/suppl/GSM554155.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554156 | GPL85 |
|
Rat liver control_52 week_rep3
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: control
|
|
| Sample_geo_accession | GSM554156
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554156/suppl/GSM554156.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554157 | GPL85 |
|
Rat liver TCDD_52 week_rep1
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 100ng TCDD
|
|
| Sample_geo_accession | GSM554157
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554157/suppl/GSM554157.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554158 | GPL85 |
|
Rat liver TCDD_52 week_rep2
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 100ng TCDD
|
|
| Sample_geo_accession | GSM554158
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554158/suppl/GSM554158.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554159 | GPL85 |
|
Rat liver TCDD_52 week_rep3
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 100ng TCDD
|
|
| Sample_geo_accession | GSM554159
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554159/suppl/GSM554159.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554160 | GPL85 |
|
Rat liver_30ng PCB126_52 week_ rep1
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 30ng PCB126
|
|
| Sample_geo_accession | GSM554160
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554160/suppl/GSM554160.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554161 | GPL85 |
|
Rat liver_30ng PCB126_52 week_ rep2
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 30ng PCB126
|
|
| Sample_geo_accession | GSM554161
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554161/suppl/GSM554161.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554162 | GPL85 |
|
Rat liver_30ng PCB126_52 week_ rep3
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 30ng PCB126
|
|
| Sample_geo_accession | GSM554162
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554162/suppl/GSM554162.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554163 | GPL85 |
|
Rat liver_300ng PCB126_52 week_ rep1
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 300ng PCB126
|
|
| Sample_geo_accession | GSM554163
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554163/suppl/GSM554163.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554164 | GPL85 |
|
Rat liver_300ng PCB126_52 week_ rep2
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 300ng PCB126
|
|
| Sample_geo_accession | GSM554164
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554164/suppl/GSM554164.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554165 | GPL85 |
|
Rat liver_300ng PCB126_52 week_ rep3
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 300ng PCB126
|
|
| Sample_geo_accession | GSM554165
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554165/suppl/GSM554165.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554166 | GPL85 |
|
Rat liver_1000ng PCB126_52 week_ rep1
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 1000ng PCB126
|
|
| Sample_geo_accession | GSM554166
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554166/suppl/GSM554166.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
| | |
|
GSM554167 | GPL85 |
|
Rat liver_1000ng PCB126_52 week_ rep2
|
sprague dawley rat liver (52wks)
|
strain: sprague dawley
tissue: liver
agent: 1000ng PCB126
|
|
| Sample_geo_accession | GSM554167
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554167/suppl/GSM554167.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
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GSM554168 | GPL85 |
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Rat liver_1000ng PCB126_52 week_ rep3
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sprague dawley rat liver (52wks)
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strain: sprague dawley
tissue: liver
agent: 1000ng PCB126
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|
| Sample_geo_accession | GSM554168
| | Sample_status | Public on Jun 10 2010
| | Sample_submission_date | Jun 09 2010
| | Sample_last_update_date | Jun 09 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with the Qiagen RNeasy kit following the manufacture's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | High quality RNA was transformed into biotinylated cRNA by the Roswell Park Cancer Institute Gene Expression Facility (Buffalo, NY)
| | Sample_hyb_protocol | cRNA was hybridized to RGU34A GeneChips (Affymetrix, Santa Clara, CA)
| | Sample_scan_protocol | GeneChips were scanned with the Affymetrix 428 scanner.
| | Sample_data_processing | Probe-level data from cell intensity files were background subtracted and normalized by the gc-Robust Multiarray Analysis method using ArrayAssist.
| | Sample_platform_id | GPL85
| | Sample_contact_name | Corie,,Ellison
| | Sample_contact_laboratory | James Olson
| | Sample_contact_department | Pharmacology and Toxicology
| | Sample_contact_institute | University at Buffalo
| | Sample_contact_address | 102 Farber hall
| | Sample_contact_city | Buffalo
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14214
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM554nnn/GSM554168/suppl/GSM554168.CEL.gz
| | Sample_series_id | GSE22263
| | Sample_data_row_count | 8799
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