Search results for the GEO ID: GSE22342  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM556146 | GPL570 |
|
CD11cHI dMϕs, patient 2
|
fetal_gestation: 8 weeks gestation
|
tissue: first trimester human decidua
group: CD11cHI dMϕs
|
|
| Sample_geo_accession | GSM556146
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556146/suppl/GSM556146.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556147 | GPL570 |
|
CD11cHI dMϕs, patient 3
|
fetal_gestation: 6 weeks gestation
|
tissue: first trimester human decidua
group: CD11cHI dMϕs
|
|
| Sample_geo_accession | GSM556147
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556147/suppl/GSM556147.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556148 | GPL570 |
|
CD11cHI dMϕs, patient 4
|
fetal_gestation: 9 weeks gestation
|
tissue: first trimester human decidua
group: CD11cHI dMϕs
|
|
| Sample_geo_accession | GSM556148
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556148/suppl/GSM556148.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556149 | GPL570 |
|
CD11cHI dMϕs, patient 5
|
fetal_gestation: 7 weeks gestation
|
tissue: first trimester human decidua
group: CD11cHI dMϕs
|
|
| Sample_geo_accession | GSM556149
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556149/suppl/GSM556149.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556150 | GPL570 |
|
CD11cHI dMϕs, patient 6
|
fetal_gestation: 7 weeks gestation
|
tissue: first trimester human decidua
group: CD11cHI dMϕs
|
|
| Sample_geo_accession | GSM556150
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556150/suppl/GSM556150.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556151 | GPL570 |
|
CD11cHI dMϕs, patient 7
|
fetal_gestation: 9 weeks gestation
|
tissue: first trimester human decidua
group: CD11cHI dMϕs
|
|
| Sample_geo_accession | GSM556151
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556151/suppl/GSM556151.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556152 | GPL570 |
|
CD11cHI dMϕs, patient 8
|
fetal_gestation: 9 weeks gestation
|
tissue: first trimester human decidua
group: CD11cHI dMϕs
|
|
| Sample_geo_accession | GSM556152
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556152/suppl/GSM556152.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556153 | GPL570 |
|
CD11cLO dMϕs, patient 1
|
fetal_gestation: 8 weeks gestation
|
tissue: first trimester human decidua
group: CD11cLO dMϕs
|
|
| Sample_geo_accession | GSM556153
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556153/suppl/GSM556153.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556154 | GPL570 |
|
CD11cLO dMϕs, patient 2
|
fetal_gestation: 8 weeks gestation
|
tissue: first trimester human decidua
group: CD11cLO dMϕs
|
|
| Sample_geo_accession | GSM556154
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556154/suppl/GSM556154.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556155 | GPL570 |
|
CD11cLO dMϕs, patient 3
|
fetal_gestation: 6 weeks gestation
|
tissue: first trimester human decidua
group: CD11cLO dMϕs
|
|
| Sample_geo_accession | GSM556155
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556155/suppl/GSM556155.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556156 | GPL570 |
|
CD11cLO dMϕs, patient 4
|
fetal_gestation: 9 weeks gestation
|
tissue: first trimester human decidua
group: CD11cLO dMϕs
|
|
| Sample_geo_accession | GSM556156
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556156/suppl/GSM556156.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556157 | GPL570 |
|
CD11cLO dMϕs, patient 5
|
fetal_gestation: 7 weeks gestation
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tissue: first trimester human decidua
group: CD11cLO dMϕs
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| Sample_geo_accession | GSM556157
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556157/suppl/GSM556157.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
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GSM556158 | GPL570 |
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CD11cLO dMϕs, patient 6
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fetal_gestation: 7 weeks gestation
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tissue: first trimester human decidua
group: CD11cLO dMϕs
|
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| Sample_geo_accession | GSM556158
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556158/suppl/GSM556158.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556159 | GPL570 |
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CD11cLO dMϕs, patient 7
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fetal_gestation: 9 weeks gestation
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tissue: first trimester human decidua
group: CD11cLO dMϕs
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| Sample_geo_accession | GSM556159
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556159/suppl/GSM556159.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
| | |
|
GSM556160 | GPL570 |
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CD11cLO dMϕs, patient 8
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fetal_gestation: 9 weeks gestation
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tissue: first trimester human decidua
group: CD11cLO dMϕs
|
|
| Sample_geo_accession | GSM556160
| | Sample_status | Public on May 23 2011
| | Sample_submission_date | Jun 14 2010
| | Sample_last_update_date | May 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | macrophage_release_protocol: Cells were sorted into CD11cHI and CD11cLO dMϕ by MoFlo cell sorting following digestion release from human decidual tissue.
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Stratagene®s Absolutely RNA™ microprep kit protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | amplification_protocol: Purified RNA was subjected to one round of amplification and biotinylation using Ambion's® MessageAmp™III RNA Amplification kit.
| | Sample_label_protocol_ch1 | Biotinylated aRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of aRNA were hybridized for 16 hr at 45C on Human U133 2.0 Plus array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was normalized using the Broad's GenePattern program that utilizes the RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Brandy,Lynn,Houser
| | Sample_contact_email | brandy_houser@hms.harvard.edu
| | Sample_contact_laboratory | Jack L. Strominger
| | Sample_contact_department | Stem Cell and Regenerative Biology
| | Sample_contact_institute | Harvard University
| | Sample_contact_address | 52 Oxford St.
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02138
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM556nnn/GSM556160/suppl/GSM556160.CEL.gz
| | Sample_series_id | GSE22342
| | Sample_data_row_count | 54675
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