Search results for the GEO ID: GSE22515  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM559074 | GPL1355 |
|
control_1
|
Dahl S Rat fed with High-salt (2%) diet
|
tissue: Kidney
genotype: Dahl salt sensitive rat
age: 53 days old
|
Affymetrix Rat Genome 230 2.0 Array
|
| Sample_geo_accession | GSM559074
| | Sample_status | Public on Jul 15 2010
| | Sample_submission_date | Jun 22 2010
| | Sample_last_update_date | Jun 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | After weaning all rats were fed with High-salt (2%) diet (Harlan Teklad diet TD 7034; Harlan–Sprague-Dawley).
| | Sample_growth_protocol_ch1 | All rats born on the same day were selected and weaned at 30 days of age.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Rat Genome 230 2.0 Array.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Sample data tables have MAS5 data. The data were further analyzed with R statistical package (version 2.8.1).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bina,,Joe
| | Sample_contact_email | bina.joe@utoledo.edu
| | Sample_contact_phone | 419-383-4415
| | Sample_contact_fax | 419-383-2871
| | Sample_contact_laboratory | Physiological Genomics Laboratory
| | Sample_contact_department | Physiology and Pharmacology
| | Sample_contact_institute | University of toledo
| | Sample_contact_address | 3000 Arlington avenue
| | Sample_contact_city | Toledo
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 43614
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559074/suppl/GSM559074.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559074/suppl/GSM559074.CHP.gz
| | Sample_series_id | GSE22515
| | Sample_data_row_count | 31099
| | |
|
GSM559075 | GPL1355 |
|
control_2
|
Dahl S Rat fed with High-salt (2%) diet
|
tissue: Kidney
genotype: Dahl salt sensitive rat
age: 53 days old
|
Affymetrix Rat Genome 230 2.0 Array
|
| Sample_geo_accession | GSM559075
| | Sample_status | Public on Jul 15 2010
| | Sample_submission_date | Jun 22 2010
| | Sample_last_update_date | Jun 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | After weaning all rats were fed with High-salt (2%) diet (Harlan Teklad diet TD 7034; Harlan–Sprague-Dawley).
| | Sample_growth_protocol_ch1 | All rats born on the same day were selected and weaned at 30 days of age.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Rat Genome 230 2.0 Array.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Sample data tables have MAS5 data. The data were further analyzed with R statistical package (version 2.8.1).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bina,,Joe
| | Sample_contact_email | bina.joe@utoledo.edu
| | Sample_contact_phone | 419-383-4415
| | Sample_contact_fax | 419-383-2871
| | Sample_contact_laboratory | Physiological Genomics Laboratory
| | Sample_contact_department | Physiology and Pharmacology
| | Sample_contact_institute | University of toledo
| | Sample_contact_address | 3000 Arlington avenue
| | Sample_contact_city | Toledo
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 43614
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559075/suppl/GSM559075.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559075/suppl/GSM559075.CHP.gz
| | Sample_series_id | GSE22515
| | Sample_data_row_count | 31099
| | |
|
GSM559076 | GPL1355 |
|
control_3
|
Dahl S Rat fed with High-salt (2%) diet
|
tissue: Kidney
genotype: Dahl salt sensitive rat
age: 53 days old
|
Affymetrix Rat Genome 230 2.0 Array
|
| Sample_geo_accession | GSM559076
| | Sample_status | Public on Jul 15 2010
| | Sample_submission_date | Jun 22 2010
| | Sample_last_update_date | Jun 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | After weaning all rats were fed with High-salt (2%) diet (Harlan Teklad diet TD 7034; Harlan–Sprague-Dawley).
| | Sample_growth_protocol_ch1 | All rats born on the same day were selected and weaned at 30 days of age.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Rat Genome 230 2.0 Array.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Sample data tables have MAS5 data. The data were further analyzed with R statistical package (version 2.8.1).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bina,,Joe
| | Sample_contact_email | bina.joe@utoledo.edu
| | Sample_contact_phone | 419-383-4415
| | Sample_contact_fax | 419-383-2871
| | Sample_contact_laboratory | Physiological Genomics Laboratory
| | Sample_contact_department | Physiology and Pharmacology
| | Sample_contact_institute | University of toledo
| | Sample_contact_address | 3000 Arlington avenue
| | Sample_contact_city | Toledo
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 43614
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559076/suppl/GSM559076.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559076/suppl/GSM559076.CHP.gz
| | Sample_series_id | GSE22515
| | Sample_data_row_count | 31099
| | |
|
GSM559077 | GPL1355 |
|
Experimental_1
|
S.R(9)x3x2Bx1x8 Congenic Rat Kidney fed with High-salt (2%) diet
|
tissue: Kidney
genotype: S.R(9)x3x2Bx1x8 Congenic rat with Dahl S background
age: 53 days old
|
Affymetrix Rat Genome 230 2.0 Array
|
| Sample_geo_accession | GSM559077
| | Sample_status | Public on Jul 15 2010
| | Sample_submission_date | Jun 22 2010
| | Sample_last_update_date | Jun 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | After weaning all rats were fed with High-salt (2%) diet (Harlan Teklad diet TD 7034; Harlan–Sprague-Dawley).
| | Sample_growth_protocol_ch1 | All rats born on the same day were selected and weaned at 30 days of age.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Rat Genome 230 2.0 Array.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Sample data tables have MAS5 data. The data were further analyzed with R statistical package (version 2.8.1).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bina,,Joe
| | Sample_contact_email | bina.joe@utoledo.edu
| | Sample_contact_phone | 419-383-4415
| | Sample_contact_fax | 419-383-2871
| | Sample_contact_laboratory | Physiological Genomics Laboratory
| | Sample_contact_department | Physiology and Pharmacology
| | Sample_contact_institute | University of toledo
| | Sample_contact_address | 3000 Arlington avenue
| | Sample_contact_city | Toledo
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 43614
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559077/suppl/GSM559077.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559077/suppl/GSM559077.CHP.gz
| | Sample_series_id | GSE22515
| | Sample_data_row_count | 31099
| | |
|
GSM559078 | GPL1355 |
|
Experimental_2
|
S.R(9)x3x2Bx1x8 Congenic Rat Kidney fed with High-salt (2%) diet
|
tissue: Kidney
genotype: S.R(9)x3x2Bx1x8 Congenic rat with Dahl S background
age: 53 days old
|
Affymetrix Rat Genome 230 2.0 Array
|
| Sample_geo_accession | GSM559078
| | Sample_status | Public on Jul 15 2010
| | Sample_submission_date | Jun 22 2010
| | Sample_last_update_date | Jun 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | After weaning all rats were fed with High-salt (2%) diet (Harlan Teklad diet TD 7034; Harlan–Sprague-Dawley).
| | Sample_growth_protocol_ch1 | All rats born on the same day were selected and weaned at 30 days of age.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Rat Genome 230 2.0 Array.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Sample data tables have MAS5 data. The data were further analyzed with R statistical package (version 2.8.1).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bina,,Joe
| | Sample_contact_email | bina.joe@utoledo.edu
| | Sample_contact_phone | 419-383-4415
| | Sample_contact_fax | 419-383-2871
| | Sample_contact_laboratory | Physiological Genomics Laboratory
| | Sample_contact_department | Physiology and Pharmacology
| | Sample_contact_institute | University of toledo
| | Sample_contact_address | 3000 Arlington avenue
| | Sample_contact_city | Toledo
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 43614
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559078/suppl/GSM559078.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559078/suppl/GSM559078.CHP.gz
| | Sample_series_id | GSE22515
| | Sample_data_row_count | 31099
| | |
|
GSM559079 | GPL1355 |
|
Experimental_3
|
S.R(9)x3x2Bx1x8 Congenic Rat Kidney fed with High-salt (2%) diet
|
tissue: Kidney
genotype: S.R(9)x3x2Bx1x8 Congenic rat with Dahl S background
age: 53 days old
|
Affymetrix Rat Genome 230 2.0 Array
|
| Sample_geo_accession | GSM559079
| | Sample_status | Public on Jul 15 2010
| | Sample_submission_date | Jun 22 2010
| | Sample_last_update_date | Jun 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | After weaning all rats were fed with High-salt (2%) diet (Harlan Teklad diet TD 7034; Harlan–Sprague-Dawley).
| | Sample_growth_protocol_ch1 | All rats born on the same day were selected and weaned at 30 days of age.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Rat Genome 230 2.0 Array.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Sample data tables have MAS5 data. The data were further analyzed with R statistical package (version 2.8.1).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bina,,Joe
| | Sample_contact_email | bina.joe@utoledo.edu
| | Sample_contact_phone | 419-383-4415
| | Sample_contact_fax | 419-383-2871
| | Sample_contact_laboratory | Physiological Genomics Laboratory
| | Sample_contact_department | Physiology and Pharmacology
| | Sample_contact_institute | University of toledo
| | Sample_contact_address | 3000 Arlington avenue
| | Sample_contact_city | Toledo
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 43614
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559079/suppl/GSM559079.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM559nnn/GSM559079/suppl/GSM559079.CHP.gz
| | Sample_series_id | GSE22515
| | Sample_data_row_count | 31099
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