Search results for the GEO ID: GSE22638  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM561285 | GPL1355 |
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DRG axon from an E16 rat embryo, biological replicate 1
|
axons excised from DRG neurons from an E16 embryo
|
cell type: DRG Neurons
developmental stage: E16 embryo
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|
| Sample_geo_accession | GSM561285
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561285/suppl/GSM561285.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
|
GSM561286 | GPL1355 |
|
DRG axon from an E16 rat embryo, biological replicate 2
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axons excised from DRG neurons from an E16 embryo
|
cell type: DRG Neurons
developmental stage: E16 embryo
|
|
| Sample_geo_accession | GSM561286
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561286/suppl/GSM561286.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
|
GSM561287 | GPL1355 |
|
DRG axon from an E16 rat embryo, biological replicate 3
|
axons excised from DRG neurons from an E16 embryo
|
cell type: DRG Neurons
developmental stage: E16 embryo
|
|
| Sample_geo_accession | GSM561287
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561287/suppl/GSM561287.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
|
GSM561288 | GPL1355 |
|
DRG axon from an E16 rat embryo, biological replicate 4
|
axons excised from DRG neurons from an E16 embryo
|
cell type: DRG Neurons
developmental stage: E16 embryo
|
|
| Sample_geo_accession | GSM561288
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561288/suppl/GSM561288.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
|
GSM561289 | GPL1355 |
|
DRG axon from an E16 rat embryo, biological replicate 5
|
axons excised from DRG neurons from an E16 embryo
|
cell type: DRG Neurons
developmental stage: E16 embryo
|
|
| Sample_geo_accession | GSM561289
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561289/suppl/GSM561289.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
|
GSM561290 | GPL1355 |
|
DRG axon from an adult rat, biological replicate 1
|
axons excised from DRG neurons from an adult animal
|
cell type: DRG Neurons
developmental stage: adult
|
|
| Sample_geo_accession | GSM561290
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561290/suppl/GSM561290.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
|
GSM561291 | GPL1355 |
|
DRG axon from an adult rat, biological replicate 2
|
axons excised from DRG neurons from an adult animal
|
cell type: DRG Neurons
developmental stage: adult
|
|
| Sample_geo_accession | GSM561291
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561291/suppl/GSM561291.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
|
GSM561292 | GPL1355 |
|
DRG axon from an adult rat, biological replicate 3
|
axons excised from DRG neurons from an adult animal
|
cell type: DRG Neurons
developmental stage: adult
|
|
| Sample_geo_accession | GSM561292
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561292/suppl/GSM561292.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
|
GSM561293 | GPL1355 |
|
DRG axon from an adult rat, biological replicate 4
|
axons excised from DRG neurons from an adult animal
|
cell type: DRG Neurons
developmental stage: adult
|
|
| Sample_geo_accession | GSM561293
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561293/suppl/GSM561293.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
|
GSM561294 | GPL1355 |
|
DRG axon from an adult rat, biological replicate 5
|
axons excised from DRG neurons from an adult animal
|
cell type: DRG Neurons
developmental stage: adult
|
|
| Sample_geo_accession | GSM561294
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Jun 30 2010
| | Sample_last_update_date | Nov 23 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | DRG explants were cultured in a compartmentalised chamber for 4 days and the axons (>1 cm in length) were isolated in the outer compartment of the chamber
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Axonal RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNAs were generated using Affymetrix GeneChip IVT Labeling Kit following manufacturer's instruction
| | Sample_hyb_protocol | The cRNAs were fragmented and hybridized onto Rat Genome 230 2.0 Arrays at 45 degree Celcius for 16 h. Followed by wash and stain in Affymetrix Fluidics Station 450
| | Sample_scan_protocol | Arrays were scanned with Affymetrix GCS 3000 7G scanner
| | Sample_data_processing | Data analyzed using Agilent Genespring GX v7.3 with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Brian,Yee Hong,Lam
| | Sample_contact_email | yhbl2@cam.ac.uk
| | Sample_contact_department | Metabolic Research Laboratories
| | Sample_contact_institute | University of Cambridge
| | Sample_contact_address | Box 289 Addenbookes Hospital, Hills Road
| | Sample_contact_city | Cambridge
| | Sample_contact_zip/postal_code | CB2 0QQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM561nnn/GSM561294/suppl/GSM561294.CEL.gz
| | Sample_series_id | GSE22638
| | Sample_data_row_count | 31099
| | |
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