Search results for the GEO ID: GSE22780 |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM563305 | GPL570 |
|
Patient 1-Normal
|
Pancreas
|
patient: 1
gender: male
age: 64
disease state: adjacent normal tissue
diagnosis: control
|
pancreatic tissue adjacent to pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563305
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563305/suppl/GSM563305.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563305/suppl/GSM563305.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563306 | GPL570 |
|
Patient 1-Tumor
|
Pancreatic tumor tissue
|
patient: 1
gender: male
age: 64
disease state: Pancreatic tumor tissue
diagnosis: Moderately differentiated pancreatic adenocarcinoma with metastasis to lymph nodes
|
pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563306
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563306/suppl/GSM563306.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563306/suppl/GSM563306.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563307 | GPL570 |
|
Patient 2-Normal
|
Pancreas
|
patient: 2
gender: female
age: 38
disease state: adjacent normal tissue
diagnosis: control
|
pancreatic tissue adjacent to pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563307
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563307/suppl/GSM563307.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563307/suppl/GSM563307.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563308 | GPL570 |
|
Patient 2-Tumor
|
Pancreatic tumor tissue
|
patient: 2
gender: female
age: 38
disease state: Pancreatic tumor tissue
diagnosis: Undifferentiated small cell carcinoma of the pancreas with metastasis to lymph nodes
|
pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563308
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563308/suppl/GSM563308.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563308/suppl/GSM563308.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563309 | GPL570 |
|
Patient 3-Normal
|
Pancreas
|
patient: 3
gender: male
age: 69
disease state: adjacent normal tissue
diagnosis: control
|
pancreatic tissue adjacent to pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563309
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563309/suppl/GSM563309.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563309/suppl/GSM563309.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563310 | GPL570 |
|
Patient 3-Tumor
|
Pancreatic tumor tissue
|
patient: 3
gender: male
age: 69
disease state: Pancreatic tumor tissue
diagnosis: Well differentiated pancreatic adenocarinoma with metastasis to lymph nodes
|
pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563310
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563310/suppl/GSM563310.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563310/suppl/GSM563310.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563311 | GPL570 |
|
Patient 4-Normal
|
Pancreas
|
patient: 4
gender: female
age: 69
disease state: adjacent normal tissue
diagnosis: control
|
pancreatic tissue adjacent to pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563311
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563311/suppl/GSM563311.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563311/suppl/GSM563311.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563312 | GPL570 |
|
Patient 4-Tumor
|
Pancreatic tumor tissue
|
patient: 4
gender: female
age: 69
disease state: Pancreatic tumor tissue
diagnosis: Poorly differentiated pancreatic adenocarcinoma; no metastasis to lymph nodes
|
pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563312
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563312/suppl/GSM563312.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563312/suppl/GSM563312.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563313 | GPL570 |
|
Patient 5-Normal
|
Pancreas
|
patient: 5
gender: female
age: 65
disease state: adjacent normal tissue
diagnosis: control
|
pancreatic tissue adjacent to pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563313
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563313/suppl/GSM563313.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563313/suppl/GSM563313.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563314 | GPL570 |
|
Patient 5-Tumor
|
Pancreatic tumor tissue
|
patient: 5
gender: female
age: 65
disease state: Pancreatic tumor tissue
diagnosis: Well differentiated pancreatic adenocarcinoma; no metastasis to lymph node
|
pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563314
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563314/suppl/GSM563314.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563314/suppl/GSM563314.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563315 | GPL570 |
|
Patient 6-Normal
|
Pancreas
|
patient: 6
gender: female
age: 73
disease state: adjacent normal tissue
diagnosis: control
|
pancreatic tissue adjacent to pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563315
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563315/suppl/GSM563315.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563315/suppl/GSM563315.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563316 | GPL570 |
|
Patient 6-Tumor
|
Pancreatic tumor tissue
|
patient: 6
gender: female
age: 73
disease state: Pancreatic tumor tissue
diagnosis: Pancreatic mucinous cystadenocarcinoma with perineural invasion
|
pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563316
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563316/suppl/GSM563316.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563316/suppl/GSM563316.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563317 | GPL570 |
|
Patient 7-Normal
|
Pancreas
|
patient: 7
gender: male
age: 59
disease state: adjacent normal tissue
diagnosis: control
|
pancreatic tissue adjacent to pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563317
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563317/suppl/GSM563317.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563317/suppl/GSM563317.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563318 | GPL570 |
|
Patient 7-Tumor
|
Pancreatic tumor tissue
|
patient: 7
gender: male
age: 59
disease state: Pancreatic tumor tissue
diagnosis: Pancreatic cancer
|
pancreatic cancer
|
Sample_geo_accession | GSM563318
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563318/suppl/GSM563318.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563318/suppl/GSM563318.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
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GSM563319 | GPL570 |
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Patient 8-Normal
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Pancreas
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patient: 8
gender: female
age: 52
disease state: adjacent normal tissue
diagnosis: control
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pancreatic tissue adjacent to pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563319
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563319/suppl/GSM563319.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563319/suppl/GSM563319.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
|
GSM563320 | GPL570 |
|
Patient 8-Tumor
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Pancreatic tumor tissue
|
patient: 8
gender: female
age: 52
disease state: Pancreatic tumor tissue
diagnosis: Pancreatic adenocarinoma with advanced metastasis
|
pancreatic adenocarcinoma
|
Sample_geo_accession | GSM563320
| Sample_status | Public on Jul 01 2011
| Sample_submission_date | Jul 07 2010
| Sample_last_update_date | Jul 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted from frozen pancreatic tumors and adjacent normal samples using a miRNeasy Mini Kit
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Labeling was performed using Affymetrix protocols provided by the manufacturer.
| Sample_hyb_protocol | Hybridizaiton was performed using Affymetrix protocols provided by the manufacturer
| Sample_scan_protocol | Scanning was performed using Affymetrix protocols provided by the manufacturer
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL570
| Sample_contact_name | Nanyue,,Chen
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563320/suppl/GSM563320.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM563nnn/GSM563320/suppl/GSM563320.CHP.gz
| Sample_series_id | GSE22780
| Sample_data_row_count | 54675
| |
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Make groups for comparisons |
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Select GSMs and click on "Add groups" |
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