Search results for the GEO ID: GSE23178  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM570614 | GPL1261 |
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Lung_control_1
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Lung tissue specimens from normal control mouse
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strain: ddY
gender: male
age: Six-weeks-old
tissue: Lung
agent: control
disease state: control
|
Gene expression data of the murine lung after repeated intratracheal injection of RPMI-1636 medium only, as control mouse.
01_C1_No_1071_(Mouse430_2)
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| Sample_geo_accession | GSM570614
| | Sample_status | Public on Jul 29 2010
| | Sample_submission_date | Jul 27 2010
| | Sample_last_update_date | Jul 29 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | RPMI-1640 medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA targets preparation were performed according to the manufacturer's protocol using GeneChip(R) 3' IVT Express Kit (Affymetrix).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 12.5 μg of them was hybridized to GeneChip(R) Mouse Genome 430 2.0 Array (Affymetrix). The array was incubated for 16 hr at 45°C, then automatically washed and stained with GeneChip(R) Hybridization, Wash and Stain Kit (Affymetrix).
| | Sample_scan_protocol | The Probe Array was scanned using a GeneChip(R) Scanner 3000 7G.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix GeneChip® Command Console AGCC Software and performed log base 2 transformation.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | kayoko,,shimodaira
| | Sample_contact_institute | Toho University School of Medicine
| | Sample_contact_address | 6-11-1 Omorinishi, Ota-ku
| | Sample_contact_city | Tokyo
| | Sample_contact_zip/postal_code | 143-8541
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM570nnn/GSM570614/suppl/GSM570614.CEL.gz
| | Sample_series_id | GSE23178
| | Sample_data_row_count | 45101
| | |
|
GSM570615 | GPL1261 |
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Lung_control_2
|
Lung tissue specimens from normal control mouse
|
strain: ddY
gender: male
age: Six-weeks-old
tissue: Lung
agent: control
disease state: control
|
Gene expression data of the murine lung after repeated intratracheal injection of RPMI-1636 medium only, as control mouse.
02_C2_No_1071_(Mouse430_2)
|
| Sample_geo_accession | GSM570615
| | Sample_status | Public on Jul 29 2010
| | Sample_submission_date | Jul 27 2010
| | Sample_last_update_date | Jul 29 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | RPMI-1640 medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA targets preparation were performed according to the manufacturer's protocol using GeneChip(R) 3' IVT Express Kit (Affymetrix).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 12.5 μg of them was hybridized to GeneChip(R) Mouse Genome 430 2.0 Array (Affymetrix). The array was incubated for 16 hr at 45°C, then automatically washed and stained with GeneChip(R) Hybridization, Wash and Stain Kit (Affymetrix).
| | Sample_scan_protocol | The Probe Array was scanned using a GeneChip(R) Scanner 3000 7G.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix GeneChip® Command Console AGCC Software and performed log base 2 transformation.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | kayoko,,shimodaira
| | Sample_contact_institute | Toho University School of Medicine
| | Sample_contact_address | 6-11-1 Omorinishi, Ota-ku
| | Sample_contact_city | Tokyo
| | Sample_contact_zip/postal_code | 143-8541
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM570nnn/GSM570615/suppl/GSM570615.CEL.gz
| | Sample_series_id | GSE23178
| | Sample_data_row_count | 45101
| | |
|
GSM570616 | GPL1261 |
|
Lung_control_3
|
Lung tissue specimens from normal control mouse
|
strain: ddY
gender: male
age: Six-weeks-old
tissue: Lung
agent: control
disease state: control
|
Gene expression data of the murine lung after repeated intratracheal injection of RPMI-1636 medium only, as control mouse.
03_C3_No_1071_(Mouse430_2)
|
| Sample_geo_accession | GSM570616
| | Sample_status | Public on Jul 29 2010
| | Sample_submission_date | Jul 27 2010
| | Sample_last_update_date | Jul 29 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | RPMI-1640 medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA targets preparation were performed according to the manufacturer's protocol using GeneChip(R) 3' IVT Express Kit (Affymetrix).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 12.5 μg of them was hybridized to GeneChip(R) Mouse Genome 430 2.0 Array (Affymetrix). The array was incubated for 16 hr at 45°C, then automatically washed and stained with GeneChip(R) Hybridization, Wash and Stain Kit (Affymetrix).
| | Sample_scan_protocol | The Probe Array was scanned using a GeneChip(R) Scanner 3000 7G.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix GeneChip® Command Console AGCC Software and performed log base 2 transformation.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | kayoko,,shimodaira
| | Sample_contact_institute | Toho University School of Medicine
| | Sample_contact_address | 6-11-1 Omorinishi, Ota-ku
| | Sample_contact_city | Tokyo
| | Sample_contact_zip/postal_code | 143-8541
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM570nnn/GSM570616/suppl/GSM570616.CEL.gz
| | Sample_series_id | GSE23178
| | Sample_data_row_count | 45101
| | |
|
GSM570617 | GPL1261 |
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Lung_PAHmodel_1
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Lung tissue specimens from PAH model mouse
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strain: ddY
gender: male
age: Six-weeks-old
tissue: Lung
agent: Stachybotrys chartarum spores
disease state: PAH model
|
Gene expression data of the murine lung after repeated intratracheal injection of Stachybotrys chartarum.
04_E1_No_1071_(Mouse430_2)
|
| Sample_geo_accession | GSM570617
| | Sample_status | Public on Jul 29 2010
| | Sample_submission_date | Jul 27 2010
| | Sample_last_update_date | Jul 29 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | spores of Stachybotrys chartarum and RPMI-1640 medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA targets preparation were performed according to the manufacturer's protocol using GeneChip(R) 3' IVT Express Kit (Affymetrix).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 12.5 μg of them was hybridized to GeneChip(R) Mouse Genome 430 2.0 Array (Affymetrix). The array was incubated for 16 hr at 45°C, then automatically washed and stained with GeneChip(R) Hybridization, Wash and Stain Kit (Affymetrix).
| | Sample_scan_protocol | The Probe Array was scanned using a GeneChip(R) Scanner 3000 7G.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix GeneChip® Command Console AGCC Software and performed log base 2 transformation.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | kayoko,,shimodaira
| | Sample_contact_institute | Toho University School of Medicine
| | Sample_contact_address | 6-11-1 Omorinishi, Ota-ku
| | Sample_contact_city | Tokyo
| | Sample_contact_zip/postal_code | 143-8541
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM570nnn/GSM570617/suppl/GSM570617.CEL.gz
| | Sample_series_id | GSE23178
| | Sample_data_row_count | 45101
| | |
|
GSM570618 | GPL1261 |
|
Lung_PAHmodel_2
|
Lung tissue specimens from PAH model mouse
|
strain: ddY
gender: male
age: Six-weeks-old
tissue: Lung
agent: Stachybotrys chartarum spores
disease state: PAH model
|
Gene expression data of the murine lung after repeated intratracheal injection of Stachybotrys chartarum.
05_E2_No_1071_(Mouse430_2)
|
| Sample_geo_accession | GSM570618
| | Sample_status | Public on Jul 29 2010
| | Sample_submission_date | Jul 27 2010
| | Sample_last_update_date | Jul 29 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | spores of Stachybotrys chartarum and RPMI-1640 medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA targets preparation were performed according to the manufacturer's protocol using GeneChip(R) 3' IVT Express Kit (Affymetrix).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 12.5 μg of them was hybridized to GeneChip(R) Mouse Genome 430 2.0 Array (Affymetrix). The array was incubated for 16 hr at 45°C, then automatically washed and stained with GeneChip(R) Hybridization, Wash and Stain Kit (Affymetrix).
| | Sample_scan_protocol | The Probe Array was scanned using a GeneChip(R) Scanner 3000 7G.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix GeneChip® Command Console AGCC Software and performed log base 2 transformation.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | kayoko,,shimodaira
| | Sample_contact_institute | Toho University School of Medicine
| | Sample_contact_address | 6-11-1 Omorinishi, Ota-ku
| | Sample_contact_city | Tokyo
| | Sample_contact_zip/postal_code | 143-8541
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM570nnn/GSM570618/suppl/GSM570618.CEL.gz
| | Sample_series_id | GSE23178
| | Sample_data_row_count | 45101
| | |
|
GSM570619 | GPL1261 |
|
Lung_PAHmodel_3
|
Lung tissue specimens from PAH model mouse
|
strain: ddY
gender: male
age: Six-weeks-old
tissue: Lung
agent: Stachybotrys chartarum spores
disease state: PAH model
|
Gene expression data of the murine lung after repeated intratracheal injection of Stachybotrys chartarum.
06_E3_No_1071_(Mouse430_2)
|
| Sample_geo_accession | GSM570619
| | Sample_status | Public on Jul 29 2010
| | Sample_submission_date | Jul 27 2010
| | Sample_last_update_date | Jul 29 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | spores of Stachybotrys chartarum and RPMI-1640 medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA targets preparation were performed according to the manufacturer's protocol using GeneChip(R) 3' IVT Express Kit (Affymetrix).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | Following fragmentation, 12.5 μg of them was hybridized to GeneChip(R) Mouse Genome 430 2.0 Array (Affymetrix). The array was incubated for 16 hr at 45°C, then automatically washed and stained with GeneChip(R) Hybridization, Wash and Stain Kit (Affymetrix).
| | Sample_scan_protocol | The Probe Array was scanned using a GeneChip(R) Scanner 3000 7G.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix GeneChip® Command Console AGCC Software and performed log base 2 transformation.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | kayoko,,shimodaira
| | Sample_contact_institute | Toho University School of Medicine
| | Sample_contact_address | 6-11-1 Omorinishi, Ota-ku
| | Sample_contact_city | Tokyo
| | Sample_contact_zip/postal_code | 143-8541
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM570nnn/GSM570619/suppl/GSM570619.CEL.gz
| | Sample_series_id | GSE23178
| | Sample_data_row_count | 45101
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