Search results for the GEO ID: GSE23371  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM573357 | GPL570 |
|
Immature DCs, technical replicate 1
|
DCs derived from CD14+ monocytes from adult human blood
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: None
|
Gene expression data from immature monocyte-derived DCs
|
| Sample_geo_accession | GSM573357
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573357/suppl/GSM573357.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573358 | GPL570 |
|
Immature DCs, technical replicate 2
|
DCs derived from CD14+ monocytes from adult human blood
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: None
|
Gene expression data from immature monocyte-derived DCs
|
| Sample_geo_accession | GSM573358
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573358/suppl/GSM573358.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573359 | GPL570 |
|
Immature DCs, technical replicate 3
|
DCs derived from CD14+ monocytes from adult human blood
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: None
|
Gene expression data from immature monocyte-derived DCs
|
| Sample_geo_accession | GSM573359
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573359/suppl/GSM573359.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573360 | GPL570 |
|
Maturing DCs, technical replicate 1
|
DCs derived from CD14+ monocytes from adult human blood, stimulated with LPS for 6 hr
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: LPS 6 hr
|
Gene expression data from monocyte-derived DCs stimulated with LPS 6hr
|
| Sample_geo_accession | GSM573360
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573360/suppl/GSM573360.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573361 | GPL570 |
|
Maturing DCs, technical replicate 2
|
DCs derived from CD14+ monocytes from adult human blood, stimulated with LPS for 6 hr
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: LPS 6 hr
|
Gene expression data from monocyte-derived DCs stimulated with LPS 6hr
|
| Sample_geo_accession | GSM573361
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573361/suppl/GSM573361.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573362 | GPL570 |
|
Maturing DCs, technical replicate 3
|
DCs derived from CD14+ monocytes from adult human blood, stimulated with LPS for 6 hr
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: LPS 6 hr
|
Gene expression data from monocyte-derived DCs stimulated with LPS 6hr
|
| Sample_geo_accession | GSM573362
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573362/suppl/GSM573362.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573363 | GPL570 |
|
Tolerogenic DCs, technical replicate 1
|
DCs derived from CD14+ monocytes from adult human blood, stimulated with IL10/dexamethason for 24 hr
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: IL10/dexamethasone 24 hr
|
Gene expression data from monocyte-derived DCs stimulated with IL10/dexamethason 24hr
|
| Sample_geo_accession | GSM573363
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573363/suppl/GSM573363.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573364 | GPL570 |
|
Tolerogenic DCs, technical replicate 2
|
DCs derived from CD14+ monocytes from adult human blood, stimulated with IL10/dexamethason for 24 hr
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: IL10/dexamethasone 24 hr
|
Gene expression data from monocyte-derived DCs stimulated with IL10/dexamethason 24hr
|
| Sample_geo_accession | GSM573364
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573364/suppl/GSM573364.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573365 | GPL570 |
|
Tolerogenic DCs, technical replicate 3
|
DCs derived from CD14+ monocytes from adult human blood, stimulated with IL10/dexamethason for 24 hr
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: IL10/dexamethasone 24 hr
|
Gene expression data from monocyte-derived DCs stimulated with IL10/dexamethason 24hr
|
| Sample_geo_accession | GSM573365
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573365/suppl/GSM573365.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573366 | GPL570 |
|
Activated tolerogenic DCs, technical replicate 1
|
DCs derived from CD14+ monocytes from adult human blood, stimulated with IL10/dexamethason for 24 hr, and for an additional 6 hr with LPS
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: IL10/dexamethasone 24 hr, then LPS 6hr
|
Gene expression data from monocyte-derived DCs stimulated with IL10/dexamethason 24hr, LPS 6hr
|
| Sample_geo_accession | GSM573366
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573366/suppl/GSM573366.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573367 | GPL570 |
|
Activated tolerogenic DCs, technical replicate 2
|
DCs derived from CD14+ monocytes from adult human blood, stimulated with IL10/dexamethason for 24 hr, and for an additional 6 hr with LPS
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: IL10/dexamethasone 24 hr, then LPS 6hr
|
Gene expression data from monocyte-derived DCs stimulated with IL10/dexamethason 24hr, LPS 6hr
|
| Sample_geo_accession | GSM573367
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573367/suppl/GSM573367.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
| | |
|
GSM573368 | GPL570 |
|
Activated tolerogenic DCs, technical replicate 3
|
DCs derived from CD14+ monocytes from adult human blood, stimulated with IL10/dexamethason for 24 hr, and for an additional 6 hr with LPS
|
cell type: DCs derived from CD14+ blood monocytes cultured for 6 days in the presence of IL4 and GGM-CSF
stimulus: IL10/dexamethasone 24 hr, then LPS 6hr
|
Gene expression data from monocyte-derived DCs stimulated with IL10/dexamethason 24hr, LPS 6hr
|
| Sample_geo_accession | GSM573368
| | Sample_status | Public on Jul 08 2011
| | Sample_submission_date | Aug 02 2010
| | Sample_last_update_date | Jul 08 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy column purification
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotin labeling using Affymetrix 3' IVT Express Kit, following manufacturer's directions
| | Sample_hyb_protocol | 17 hours at 45 degrees Celsius in Affymetrix hybridization oven at 60 rpm,washing and staining in Fluidics station 450 using using Stain cocktails included in the Affymetrix 3' IVT Express Kit
| | Sample_scan_protocol | GeneChip scanner 3000 7G
| | Sample_data_processing | GCRMA (in Bioconductor version 2.6.1) using R version 2.10.1 on Mac OS X 10.4.11 (PPC), and the Bioconductor packages gcrma (version 2.18.1) and affy (version 1.24.2).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bastiaan,,Jansen
| | Sample_contact_email | bjhjansen@gmail.com
| | Sample_contact_department | Tumor Immunology
| | Sample_contact_institute | Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen
| | Sample_contact_address | PO Box 9101
| | Sample_contact_city | Nijmegen
| | Sample_contact_zip/postal_code | 6500 HB
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM573nnn/GSM573368/suppl/GSM573368.CEL.gz
| | Sample_series_id | GSE23371
| | Sample_data_row_count | 54675
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Make groups for comparisons |
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| Select GSMs and click on "Add groups" |
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