Search results for the GEO ID: GSE23495  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM575562 | GPL1261 |
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Delta9,rep1
|
Delta9 mouse adult fibroblasts
|
tissue: adult primary fibroblasts
strain: C57bl6X129S3/J
|
primary cells in culture
|
| Sample_geo_accession | GSM575562
| | Sample_status | Public on Aug 09 2010
| | Sample_submission_date | Aug 06 2010
| | Sample_last_update_date | Aug 06 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Primary adult mouse fibroblasts were cultured from the initial derivation in culture as described above and subjected to three passages at confluency, at a passage ratio of 1:3 according to the 3T3 protocol (Todaro and Green, 1963), beginning one passage after derivation.
| | Sample_growth_protocol_ch1 | Primary adult mouse fibroblasts in 10% DMEM medium with standard antibiotics
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix One Cycle Target Labeling kit
| | Sample_hyb_protocol | Following fragmentation, 12.5 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hu133Plus2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450/250.
| | Sample_scan_protocol | Affymetrix Gene Chip Scanner
| | Sample_data_processing | BRB-Array Tools version 3.7 (Biometrics Research Branch, NCI, publicly available)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lidia,,Hernandez
| | Sample_contact_email | hernandli@mail.nih.gov
| | Sample_contact_laboratory | Translational Genomics Section
| | Sample_contact_department | CCR/MOB
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM575nnn/GSM575562/suppl/GSM575562.CEL.gz
| | Sample_series_id | GSE23495
| | Sample_data_row_count | 45101
| | |
|
GSM575563 | GPL1261 |
|
Delta9,rep2
|
Delta9 mouse adult fibroblasts
|
tissue: adult primary fibroblasts
strain: C57bl6X129S3/J
|
primary cells in culture
|
| Sample_geo_accession | GSM575563
| | Sample_status | Public on Aug 09 2010
| | Sample_submission_date | Aug 06 2010
| | Sample_last_update_date | Aug 06 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Primary adult mouse fibroblasts were cultured from the initial derivation in culture as described above and subjected to three passages at confluency, at a passage ratio of 1:3 according to the 3T3 protocol (Todaro and Green, 1963), beginning one passage after derivation.
| | Sample_growth_protocol_ch1 | Primary adult mouse fibroblasts in 10% DMEM medium with standard antibiotics
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix One Cycle Target Labeling kit
| | Sample_hyb_protocol | Following fragmentation, 12.5 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hu133Plus2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450/250.
| | Sample_scan_protocol | Affymetrix Gene Chip Scanner
| | Sample_data_processing | BRB-Array Tools version 3.7 (Biometrics Research Branch, NCI, publicly available)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lidia,,Hernandez
| | Sample_contact_email | hernandli@mail.nih.gov
| | Sample_contact_laboratory | Translational Genomics Section
| | Sample_contact_department | CCR/MOB
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM575nnn/GSM575563/suppl/GSM575563.CEL.gz
| | Sample_series_id | GSE23495
| | Sample_data_row_count | 45101
| | |
|
GSM575564 | GPL1261 |
|
Delta9,rep3
|
Delta9 mouse adult fibroblasts
|
tissue: adult primary fibroblasts
strain: C57bl6X129S3/J
|
primary cells in culture
|
| Sample_geo_accession | GSM575564
| | Sample_status | Public on Aug 09 2010
| | Sample_submission_date | Aug 06 2010
| | Sample_last_update_date | Aug 06 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Primary adult mouse fibroblasts were cultured from the initial derivation in culture as described above and subjected to three passages at confluency, at a passage ratio of 1:3 according to the 3T3 protocol (Todaro and Green, 1963), beginning one passage after derivation.
| | Sample_growth_protocol_ch1 | Primary adult mouse fibroblasts in 10% DMEM medium with standard antibiotics
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix One Cycle Target Labeling kit
| | Sample_hyb_protocol | Following fragmentation, 12.5 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hu133Plus2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450/250.
| | Sample_scan_protocol | Affymetrix Gene Chip Scanner
| | Sample_data_processing | BRB-Array Tools version 3.7 (Biometrics Research Branch, NCI, publicly available)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lidia,,Hernandez
| | Sample_contact_email | hernandli@mail.nih.gov
| | Sample_contact_laboratory | Translational Genomics Section
| | Sample_contact_department | CCR/MOB
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM575nnn/GSM575564/suppl/GSM575564.CEL.gz
| | Sample_series_id | GSE23495
| | Sample_data_row_count | 45101
| | |
|
GSM575565 | GPL1261 |
|
WT, rep1
|
Wildtype mouse adult fibroblasts
|
tissue: adult primary fibroblasts
strain: C57bl6X129S3/J
|
primary cells in culture
|
| Sample_geo_accession | GSM575565
| | Sample_status | Public on Aug 09 2010
| | Sample_submission_date | Aug 06 2010
| | Sample_last_update_date | Aug 06 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Primary adult mouse fibroblasts were cultured from the initial derivation in culture as described above and subjected to three passages at confluency, at a passage ratio of 1:3 according to the 3T3 protocol (Todaro and Green, 1963), beginning one passage after derivation.
| | Sample_growth_protocol_ch1 | Primary adult mouse fibroblasts in 10% DMEM medium with standard antibiotics
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix One Cycle Target Labeling kit
| | Sample_hyb_protocol | Following fragmentation, 12.5 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hu133Plus2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450/250.
| | Sample_scan_protocol | Affymetrix Gene Chip Scanner
| | Sample_data_processing | BRB-Array Tools version 3.7 (Biometrics Research Branch, NCI, publicly available)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lidia,,Hernandez
| | Sample_contact_email | hernandli@mail.nih.gov
| | Sample_contact_laboratory | Translational Genomics Section
| | Sample_contact_department | CCR/MOB
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM575nnn/GSM575565/suppl/GSM575565.CEL.gz
| | Sample_series_id | GSE23495
| | Sample_data_row_count | 45101
| | |
|
GSM575566 | GPL1261 |
|
WT, rep2
|
Wildtype mouse adult fibroblasts
|
tissue: adult primary fibroblasts
strain: C57bl6X129S3/J
|
primary cells in culture
|
| Sample_geo_accession | GSM575566
| | Sample_status | Public on Aug 09 2010
| | Sample_submission_date | Aug 06 2010
| | Sample_last_update_date | Aug 06 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Primary adult mouse fibroblasts were cultured from the initial derivation in culture as described above and subjected to three passages at confluency, at a passage ratio of 1:3 according to the 3T3 protocol (Todaro and Green, 1963), beginning one passage after derivation.
| | Sample_growth_protocol_ch1 | Primary adult mouse fibroblasts in 10% DMEM medium with standard antibiotics
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix One Cycle Target Labeling kit
| | Sample_hyb_protocol | Following fragmentation, 12.5 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hu133Plus2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450/250.
| | Sample_scan_protocol | Affymetrix Gene Chip Scanner
| | Sample_data_processing | BRB-Array Tools version 3.7 (Biometrics Research Branch, NCI, publicly available)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lidia,,Hernandez
| | Sample_contact_email | hernandli@mail.nih.gov
| | Sample_contact_laboratory | Translational Genomics Section
| | Sample_contact_department | CCR/MOB
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM575nnn/GSM575566/suppl/GSM575566.CEL.gz
| | Sample_series_id | GSE23495
| | Sample_data_row_count | 45101
| | |
|
GSM575567 | GPL1261 |
|
WT, rep3
|
Wildtype mouse adult fibroblasts
|
tissue: adult primary fibroblasts
strain: C57bl6X129S3/J
|
primary cells in culture
|
| Sample_geo_accession | GSM575567
| | Sample_status | Public on Aug 09 2010
| | Sample_submission_date | Aug 06 2010
| | Sample_last_update_date | Aug 06 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Primary adult mouse fibroblasts were cultured from the initial derivation in culture as described above and subjected to three passages at confluency, at a passage ratio of 1:3 according to the 3T3 protocol (Todaro and Green, 1963), beginning one passage after derivation.
| | Sample_growth_protocol_ch1 | Primary adult mouse fibroblasts in 10% DMEM medium with standard antibiotics
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix One Cycle Target Labeling kit
| | Sample_hyb_protocol | Following fragmentation, 12.5 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hu133Plus2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450/250.
| | Sample_scan_protocol | Affymetrix Gene Chip Scanner
| | Sample_data_processing | BRB-Array Tools version 3.7 (Biometrics Research Branch, NCI, publicly available)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lidia,,Hernandez
| | Sample_contact_email | hernandli@mail.nih.gov
| | Sample_contact_laboratory | Translational Genomics Section
| | Sample_contact_department | CCR/MOB
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM575nnn/GSM575567/suppl/GSM575567.CEL.gz
| | Sample_series_id | GSE23495
| | Sample_data_row_count | 45101
| | |
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