Search results for the GEO ID: GSE23614  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM579045 | GPL570 |
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UOK257-2, scrambled
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UOK257-2 cells, transfected
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cell line: UOK257-2 renal cancer cell line
protocol: scrambled transfection
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S2 Si-1_(HG-U133_Plus_2)
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| Sample_geo_accession | GSM579045
| | Sample_status | Public on Oct 11 2010
| | Sample_submission_date | Aug 13 2010
| | Sample_last_update_date | Aug 24 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | siRNA transfection
| | Sample_growth_protocol_ch1 | DMEM, 10% FBS, Penicillin/Streptomycin
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol reagent and Rneasy mini kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA
| | Sample_hyb_protocol | Chips were hybridized with probes at 45 degrees C for 16 hours in the Affymetrix hybridization oven. The Affymetrix GeneChip Fluidics Station 450 was used to wash and stain the arrays.
| | Sample_scan_protocol | The Affymetrix 7G GeneChip scanner was used for scanning.
| | Sample_data_processing = affymetrix-algorithm-name | ExpressionStat
| | Sample_data_processing = affymetrix-algorithm-version | 5.0
| | Sample_data_processing = program-name | Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Seung-Beom,,Hong
| | Sample_contact_email | hongse@mail.nih.gov
| | Sample_contact_phone | 301-594-9547
| | Sample_contact_laboratory | Urologic Oncology Branch
| | Sample_contact_department | National Cancer Institute
| | Sample_contact_institute | National Institutes of Health
| | Sample_contact_address | 10 Center Dr.
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM579nnn/GSM579045/suppl/GSM579045.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM579nnn/GSM579045/suppl/GSM579045.CHP.gz
| | Sample_series_id | GSE23614
| | Sample_data_row_count | 54675
| | |
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GSM579046 | GPL570 |
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UOK257-2, siFLCN
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UOK257-2 cells, transfected
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cell line: UOK257-2 renal cancer cell line
protocol: siFLCN transfection
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S2 Si-2_(HG-U133_Plus_2)
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| Sample_geo_accession | GSM579046
| | Sample_status | Public on Oct 11 2010
| | Sample_submission_date | Aug 13 2010
| | Sample_last_update_date | Aug 24 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | siRNA transfection
| | Sample_growth_protocol_ch1 | DMEM, 10% FBS, Penicillin/Streptomycin
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol reagent and Rneasy mini kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA
| | Sample_hyb_protocol | Chips were hybridized with probes at 45 degrees C for 16 hours in the Affymetrix hybridization oven. The Affymetrix GeneChip Fluidics Station 450 was used to wash and stain the arrays.
| | Sample_scan_protocol | The Affymetrix 7G GeneChip scanner was used for scanning.
| | Sample_data_processing = affymetrix-algorithm-name | ExpressionStat
| | Sample_data_processing = affymetrix-algorithm-version | 5.0
| | Sample_data_processing = program-name | Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Seung-Beom,,Hong
| | Sample_contact_email | hongse@mail.nih.gov
| | Sample_contact_phone | 301-594-9547
| | Sample_contact_laboratory | Urologic Oncology Branch
| | Sample_contact_department | National Cancer Institute
| | Sample_contact_institute | National Institutes of Health
| | Sample_contact_address | 10 Center Dr.
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM579nnn/GSM579046/suppl/GSM579046.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM579nnn/GSM579046/suppl/GSM579046.CHP.gz
| | Sample_series_id | GSE23614
| | Sample_data_row_count | 54675
| | |
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GSM579047 | GPL570 |
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UOK257-2, siTFE3
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UOK257-2 cells, transfected
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cell line: UOK257-2 renal cancer cell line
protocol: siTFE3 transfection
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S2 Si-4_(HG-U133_Plus_2)
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| Sample_geo_accession | GSM579047
| | Sample_status | Public on Oct 11 2010
| | Sample_submission_date | Aug 13 2010
| | Sample_last_update_date | Aug 24 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | siRNA transfection
| | Sample_growth_protocol_ch1 | DMEM, 10% FBS, Penicillin/Streptomycin
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol reagent and Rneasy mini kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA
| | Sample_hyb_protocol | Chips were hybridized with probes at 45 degrees C for 16 hours in the Affymetrix hybridization oven. The Affymetrix GeneChip Fluidics Station 450 was used to wash and stain the arrays.
| | Sample_scan_protocol | The Affymetrix 7G GeneChip scanner was used for scanning.
| | Sample_data_processing = affymetrix-algorithm-name | ExpressionStat
| | Sample_data_processing = affymetrix-algorithm-version | 5.0
| | Sample_data_processing = program-name | Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Seung-Beom,,Hong
| | Sample_contact_email | hongse@mail.nih.gov
| | Sample_contact_phone | 301-594-9547
| | Sample_contact_laboratory | Urologic Oncology Branch
| | Sample_contact_department | National Cancer Institute
| | Sample_contact_institute | National Institutes of Health
| | Sample_contact_address | 10 Center Dr.
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM579nnn/GSM579047/suppl/GSM579047.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM579nnn/GSM579047/suppl/GSM579047.CHP.gz
| | Sample_series_id | GSE23614
| | Sample_data_row_count | 54675
| | |
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GSM579048 | GPL570 |
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UOK257-2, siFLCN/TFE3
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UOK257-2 cells, transfected
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cell line: UOK257-2 renal cancer cell line
protocol: siFLCN/TFE3 transfection
|
S2 Si-5_(HG-U133_Plus_2)
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| Sample_geo_accession | GSM579048
| | Sample_status | Public on Oct 11 2010
| | Sample_submission_date | Aug 13 2010
| | Sample_last_update_date | Aug 24 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | siRNA transfection
| | Sample_growth_protocol_ch1 | DMEM, 10% FBS, Penicillin/Streptomycin
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol reagent and Rneasy mini kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA
| | Sample_hyb_protocol | Chips were hybridized with probes at 45 degrees C for 16 hours in the Affymetrix hybridization oven. The Affymetrix GeneChip Fluidics Station 450 was used to wash and stain the arrays.
| | Sample_scan_protocol | The Affymetrix 7G GeneChip scanner was used for scanning.
| | Sample_data_processing = affymetrix-algorithm-name | ExpressionStat
| | Sample_data_processing = affymetrix-algorithm-version | 5.0
| | Sample_data_processing = program-name | Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Seung-Beom,,Hong
| | Sample_contact_email | hongse@mail.nih.gov
| | Sample_contact_phone | 301-594-9547
| | Sample_contact_laboratory | Urologic Oncology Branch
| | Sample_contact_department | National Cancer Institute
| | Sample_contact_institute | National Institutes of Health
| | Sample_contact_address | 10 Center Dr.
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM579nnn/GSM579048/suppl/GSM579048.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM579nnn/GSM579048/suppl/GSM579048.CHP.gz
| | Sample_series_id | GSE23614
| | Sample_data_row_count | 54675
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