Search results for the GEO ID: GSE23968  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM590391 | GPL570 |
|
H9 ESCs - gene expression
|
H9 ESCs
|
cell type: H9 ESCs
|
Gene expression profiles of human embryonic stem cells
|
| Sample_geo_accession | GSM590391
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590391/suppl/GSM590391_H9_HG-U133_Plus_2_B10_302376.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590392 | GPL570 |
|
BG01 ESCs - gene expression
|
BG01 ESCs
|
cell type: BG01 ESCs
|
Gene expression profiles of human embryonic stem cells
|
| Sample_geo_accession | GSM590392
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590392/suppl/GSM590392_BG01_HG-U133_Plus_2_B09_302374.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590393 | GPL570 |
|
MRC5 fibroblasts - gene expression
|
MRC5 fibroblasts
|
cell type: MRC5 fibroblasts
|
Gene expression profiles of human fibroblasts
|
| Sample_geo_accession | GSM590393
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590393/suppl/GSM590393_MRC5_HG-U133_Plus_2_B11_302378.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590394 | GPL570 |
|
MRC5-derived iPSC line 7 - gene expression
|
MRC5-derived iPSC line 7
|
cell type: MRC5-derived iPSC line 7
|
Gene expression profiles of human fibroblast-derived induced pluripotent stem cells
|
| Sample_geo_accession | GSM590394
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590394/suppl/GSM590394_MRC5-iPS7_HG-U133_Plus_2_B06_302368.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590395 | GPL570 |
|
MRC5-derived iPSC line 20 - gene expression
|
MRC5-derived iPSC line 20
|
cell type: MRC5-derived iPSC line 20
|
Gene expression profiles of human fibroblast-derived induced pluripotent stem cells
|
| Sample_geo_accession | GSM590395
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590395/suppl/GSM590395_MRC5-iPS20_HG-U133_Plus_2_C04_302388.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590396 | GPL570 |
|
MSC fibroblasts - gene expression
|
MSC fibroblasts
|
cell type: MSC fibroblasts
|
Gene expression profiles of human fibroblasts
|
| Sample_geo_accession | GSM590396
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590396/suppl/GSM590396_MSC_HG-U133_Plus_2_B04_302364.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590397 | GPL570 |
|
MSC-derived iPSC line 1 - gene expression
|
MSC-derived iPSC line 1
|
cell type: MSC-derived iPSC line 1
|
Gene expression profiles of human fibroblast-derived induced pluripotent stem cells
|
| Sample_geo_accession | GSM590397
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590397/suppl/GSM590397_MSC-iPS1_HG-U133_Plus_2_B07_302370.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590398 | GPL570 |
|
MSC-derived iPSC line 3 - gene expression
|
MSC-derived iPSC line 3
|
cell type: MSC-derived iPSC line 3
|
Gene expression profiles of human fibroblast-derived induced pluripotent stem cells
|
| Sample_geo_accession | GSM590398
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590398/suppl/GSM590398_MSC-iPS3_HG-U133_Plus_2_B12_302380.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590399 | GPL570 |
|
BJ1 fibroblasts - gene expression
|
BJ1 fibroblasts
|
cell type: BJ1 fibroblasts
|
Gene expression profiles of human fibroblasts
|
| Sample_geo_accession | GSM590399
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590399/suppl/GSM590399_BJ1_HG-U133_Plus_2_C01_302382.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590400 | GPL570 |
|
BJ1-derived iPSC line 2 - gene expression
|
BJ1-derived iPSC line 2
|
cell type: BJ1-derived iPSC line 2
|
Gene expression profiles of human fibroblast-derived induced pluripotent stem cells
|
| Sample_geo_accession | GSM590400
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590400/suppl/GSM590400_BJ1-iPS2_HG-U133_Plus_2_B05_302366.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590401 | GPL570 |
|
hFib2 fibroblasts, replicate 1 - gene expression
|
hFib2 fibroblasts, replicate 1
|
cell type: hFib2 fibroblasts
|
Gene expression profiles of human fibroblasts
|
| Sample_geo_accession | GSM590401
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590401/suppl/GSM590401_hFib2_HG-U133_Plus_2_C02_302384.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590402 | GPL570 |
|
hFib2 fibroblasts, replicate 2 - gene expression
|
hFib2 fibroblasts, replicate 2
|
cell type: hFib2 fibroblasts
|
Gene expression profiles of human fibroblasts
|
| Sample_geo_accession | GSM590402
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590402/suppl/GSM590402_hFib2a_HG-U133_Plus_2_C03_302386.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590403 | GPL570 |
|
hFib2-derived iPSC line 4 - gene expression
|
hFib2-derived iPSC line 4
|
cell type: hFib2-derived iPSC line 4
|
Gene expression profiles of human fibroblast-derived induced pluripotent stem cells
|
| Sample_geo_accession | GSM590403
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590403/suppl/GSM590403_hFib2-iPS4_HG-U133_Plus_2_B08_302372.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
GSM590404 | GPL570 |
|
hFib2-derived iPSC line 5 - gene expression
|
hFib2-derived iPSC line 5
|
cell type: hFib2-derived iPSC line 5
|
Gene expression profiles of human fibroblast-derived induced pluripotent stem cells
|
| Sample_geo_accession | GSM590404
| | Sample_status | Public on Nov 10 2010
| | Sample_submission_date | Sep 03 2010
| | Sample_last_update_date | Nov 10 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | differentiated cells were removed from ESC and iPSC cultures prior to RNA isolation
| | Sample_growth_protocol_ch1 | ESCs and iPSCs were grown on MEFs in standard human ESC media (DMEM/F12, 20% KOSR, 2mM L-Glutamine, 0.1mM NEAA, 0.1mM b-mercaptoethanol, 10ng/ml bFGF), fibroblasts were grown in aMEM/10%FCS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_hyb_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_scan_protocol | Standard Affymetrix protocols for Human U133 Plus 2.0 Array
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Nataly,Moran,Cabili
| | Sample_contact_email | nmcabili@fas.harvard.edu
| | Sample_contact_institute | Broad Institute ; Harvard University
| | Sample_contact_address | 7 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02142
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM590nnn/GSM590404/suppl/GSM590404_hFib2-iPS5_HG-U133_Plus_2_C05_302390.CEL.gz
| | Sample_series_id | GSE23968
| | Sample_series_id | GSE24182
| | Sample_data_row_count | 54675
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|
