Search results for the GEO ID: GSE24350  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM600311 | GPL1261 |
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NOD CD11b+ cells unstimulated, biological rep1
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NOD CD11b+ unstimulated
|
strain: NOD
cell type: CD11b+ cells
agent: control
biological rep: 1
|
NOD 0-1
NOD 0_5.28.09_1576G.CEL
|
| Sample_geo_accession | GSM600311
| | Sample_status | Public on Sep 28 2010
| | Sample_submission_date | Sep 24 2010
| | Sample_last_update_date | Sep 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were incubated with either media alone (unstimulated condition) or with 5 ug/ml peptidoglycan
| | Sample_growth_protocol_ch1 | Cells were incubated at 37 degrees
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen Encore Biotin Module
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | RMA normalization method, software- Expression File Creator
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Vijay,,Kuchroo
| | Sample_contact_email | vkuchroo@rics.bwh.harvard.edu
| | Sample_contact_institute | Harvard Medical School
| | Sample_contact_address | 77 Avenue Louis Pasteur, HIM 785
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM600nnn/GSM600311/suppl/GSM600311.CEL.gz
| | Sample_series_id | GSE24350
| | Sample_data_row_count | 45101
| | |
|
GSM600312 | GPL1261 |
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NOD CD11b+ cells unstimulated, biological rep2
|
NOD CD11b+ unstimulated
|
strain: NOD
cell type: CD11b+ cells
agent: control
biological rep: 2
|
NOD 0-2
NOD 0_1576C_RR1.CEL
|
| Sample_geo_accession | GSM600312
| | Sample_status | Public on Sep 28 2010
| | Sample_submission_date | Sep 24 2010
| | Sample_last_update_date | Sep 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were incubated with either media alone (unstimulated condition) or with 5 ug/ml peptidoglycan
| | Sample_growth_protocol_ch1 | Cells were incubated at 37 degrees
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen Encore Biotin Module
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | RMA normalization method, software- Expression File Creator
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Vijay,,Kuchroo
| | Sample_contact_email | vkuchroo@rics.bwh.harvard.edu
| | Sample_contact_institute | Harvard Medical School
| | Sample_contact_address | 77 Avenue Louis Pasteur, HIM 785
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM600nnn/GSM600312/suppl/GSM600312.CEL.gz
| | Sample_series_id | GSE24350
| | Sample_data_row_count | 45101
| | |
|
GSM600313 | GPL1261 |
|
NOD CD11b+ cells PGN stimulated, biological rep1
|
NOD CD11b+ PGN stimulated
|
strain: NOD
cell type: CD11b+ cells
agent: PGN
biological rep: 1
|
NOD PGN-1
NOD PGN_5.28.09_1576H.CEL
|
| Sample_geo_accession | GSM600313
| | Sample_status | Public on Sep 28 2010
| | Sample_submission_date | Sep 24 2010
| | Sample_last_update_date | Sep 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were incubated with either media alone (unstimulated condition) or with 5 ug/ml peptidoglycan
| | Sample_growth_protocol_ch1 | Cells were incubated at 37 degrees
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen Encore Biotin Module
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | RMA normalization method, software- Expression File Creator
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Vijay,,Kuchroo
| | Sample_contact_email | vkuchroo@rics.bwh.harvard.edu
| | Sample_contact_institute | Harvard Medical School
| | Sample_contact_address | 77 Avenue Louis Pasteur, HIM 785
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM600nnn/GSM600313/suppl/GSM600313.CEL.gz
| | Sample_series_id | GSE24350
| | Sample_data_row_count | 45101
| | |
|
GSM600314 | GPL1261 |
|
NOD CD11b+ cells PGN stimulated, biological rep2
|
NOD CD11b+ PGN stimulated
|
strain: NOD
cell type: CD11b+ cells
agent: PGN
biological rep: 2
|
NOD PGN-2
NOD PGN_1576D_RR1.CEL
|
| Sample_geo_accession | GSM600314
| | Sample_status | Public on Sep 28 2010
| | Sample_submission_date | Sep 24 2010
| | Sample_last_update_date | Sep 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were incubated with either media alone (unstimulated condition) or with 5 ug/ml peptidoglycan
| | Sample_growth_protocol_ch1 | Cells were incubated at 37 degrees
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen Encore Biotin Module
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | RMA normalization method, software- Expression File Creator
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Vijay,,Kuchroo
| | Sample_contact_email | vkuchroo@rics.bwh.harvard.edu
| | Sample_contact_institute | Harvard Medical School
| | Sample_contact_address | 77 Avenue Louis Pasteur, HIM 785
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM600nnn/GSM600314/suppl/GSM600314.CEL.gz
| | Sample_series_id | GSE24350
| | Sample_data_row_count | 45101
| | |
|
GSM600315 | GPL1261 |
|
Idd3 CD11b+ cells unstimulated, biological rep1
|
Idd3 CD11b+ unstimulated
|
strain: NOD.Idd3
cell type: CD11b+ cells
agent: control
biological rep: 1
|
Idd3 0-1
Idd3 0_5.28.09_1576E_RR1.CEL
|
| Sample_geo_accession | GSM600315
| | Sample_status | Public on Sep 28 2010
| | Sample_submission_date | Sep 24 2010
| | Sample_last_update_date | Sep 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were incubated with either media alone (unstimulated condition) or with 5 ug/ml peptidoglycan
| | Sample_growth_protocol_ch1 | Cells were incubated at 37 degrees
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen Encore Biotin Module
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | RMA normalization method, software- Expression File Creator
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Vijay,,Kuchroo
| | Sample_contact_email | vkuchroo@rics.bwh.harvard.edu
| | Sample_contact_institute | Harvard Medical School
| | Sample_contact_address | 77 Avenue Louis Pasteur, HIM 785
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM600nnn/GSM600315/suppl/GSM600315.CEL.gz
| | Sample_series_id | GSE24350
| | Sample_data_row_count | 45101
| | |
|
GSM600316 | GPL1261 |
|
Idd3 CD11b+ cells unstimulated, biological rep2
|
Idd3 CD11b+ unstimulated
|
strain: NOD.Idd3
cell type: CD11b+ cells
agent: control
biological rep: 2
|
Idd3 0-2
Idd3 0_1576A.CEL
|
| Sample_geo_accession | GSM600316
| | Sample_status | Public on Sep 28 2010
| | Sample_submission_date | Sep 24 2010
| | Sample_last_update_date | Sep 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were incubated with either media alone (unstimulated condition) or with 5 ug/ml peptidoglycan
| | Sample_growth_protocol_ch1 | Cells were incubated at 37 degrees
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen Encore Biotin Module
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | RMA normalization method, software- Expression File Creator
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Vijay,,Kuchroo
| | Sample_contact_email | vkuchroo@rics.bwh.harvard.edu
| | Sample_contact_institute | Harvard Medical School
| | Sample_contact_address | 77 Avenue Louis Pasteur, HIM 785
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM600nnn/GSM600316/suppl/GSM600316.CEL.gz
| | Sample_series_id | GSE24350
| | Sample_data_row_count | 45101
| | |
|
GSM600317 | GPL1261 |
|
Idd3 CD11b+ cells PGN stimulated, biological rep1
|
Idd3 CD11b+ PGN stimulated
|
strain: NOD.Idd3
cell type: CD11b+ cells
agent: PGN
biological rep: 1
|
Idd3 PGN-1
Idd3 PGN_5.28.09_1576F.CEL
|
| Sample_geo_accession | GSM600317
| | Sample_status | Public on Sep 28 2010
| | Sample_submission_date | Sep 24 2010
| | Sample_last_update_date | Sep 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were incubated with either media alone (unstimulated condition) or with 5 ug/ml peptidoglycan
| | Sample_growth_protocol_ch1 | Cells were incubated at 37 degrees
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen Encore Biotin Module
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | RMA normalization method, software- Expression File Creator
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Vijay,,Kuchroo
| | Sample_contact_email | vkuchroo@rics.bwh.harvard.edu
| | Sample_contact_institute | Harvard Medical School
| | Sample_contact_address | 77 Avenue Louis Pasteur, HIM 785
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM600nnn/GSM600317/suppl/GSM600317.CEL.gz
| | Sample_series_id | GSE24350
| | Sample_data_row_count | 45101
| | |
|
GSM600318 | GPL1261 |
|
Idd3 CD11b+ cells PGN stimulated, biological rep2
|
Idd3 CD11b+ PGN stimulated
|
strain: NOD.Idd3
cell type: CD11b+ cells
agent: PGN
biological rep: 2
|
Idd3 PGN-2
Idd3 PGN_1576B.CEL
|
| Sample_geo_accession | GSM600318
| | Sample_status | Public on Sep 28 2010
| | Sample_submission_date | Sep 24 2010
| | Sample_last_update_date | Sep 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were incubated with either media alone (unstimulated condition) or with 5 ug/ml peptidoglycan
| | Sample_growth_protocol_ch1 | Cells were incubated at 37 degrees
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen Encore Biotin Module
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | RMA normalization method, software- Expression File Creator
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Vijay,,Kuchroo
| | Sample_contact_email | vkuchroo@rics.bwh.harvard.edu
| | Sample_contact_institute | Harvard Medical School
| | Sample_contact_address | 77 Avenue Louis Pasteur, HIM 785
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM600nnn/GSM600318/suppl/GSM600318.CEL.gz
| | Sample_series_id | GSE24350
| | Sample_data_row_count | 45101
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