Search results for the GEO ID: GSE25244  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM621138 | GPL1261 |
|
T_28 RNA CTL1
|
kidney uninfected
|
infection phase: none
tissue: kidney
|
T_28 RNA CTL1
|
| Sample_geo_accession | GSM621138
| | Sample_status | Public on Aug 03 2011
| | Sample_submission_date | Nov 09 2010
| | Sample_last_update_date | Aug 03 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000.
| | Sample_data_processing | RMA summarization, log2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Robert,,Geffers
| | Sample_contact_email | robert.geffers@helmholtz-hzi.de
| | Sample_contact_phone | +49 531-6181-3058
| | Sample_contact_laboratory | Array Facility
| | Sample_contact_department | Dep. Cell Biology
| | Sample_contact_institute | HCI - Helmholtz Centre for Infection Research
| | Sample_contact_address | Inhoffenstr. 7
| | Sample_contact_city | Braunschweig
| | Sample_contact_zip/postal_code | 38124
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM621nnn/GSM621138/suppl/GSM621138.CEL.gz
| | Sample_series_id | GSE25244
| | Sample_data_row_count | 45101
| | |
|
GSM621139 | GPL1261 |
|
T_28 RNA CTL2
|
kidney uninfected
|
infection phase: none
tissue: kidney
|
T_28 RNA CTL2
|
| Sample_geo_accession | GSM621139
| | Sample_status | Public on Aug 03 2011
| | Sample_submission_date | Nov 09 2010
| | Sample_last_update_date | Aug 03 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000.
| | Sample_data_processing | RMA summarization, log2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Robert,,Geffers
| | Sample_contact_email | robert.geffers@helmholtz-hzi.de
| | Sample_contact_phone | +49 531-6181-3058
| | Sample_contact_laboratory | Array Facility
| | Sample_contact_department | Dep. Cell Biology
| | Sample_contact_institute | HCI - Helmholtz Centre for Infection Research
| | Sample_contact_address | Inhoffenstr. 7
| | Sample_contact_city | Braunschweig
| | Sample_contact_zip/postal_code | 38124
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM621nnn/GSM621139/suppl/GSM621139.CEL.gz
| | Sample_series_id | GSE25244
| | Sample_data_row_count | 45101
| | |
|
GSM621140 | GPL1261 |
|
T_28 RNA CTL4
|
kidney uninfected
|
infection phase: none
tissue: kidney
|
T_28 RNA CTL4
|
| Sample_geo_accession | GSM621140
| | Sample_status | Public on Aug 03 2011
| | Sample_submission_date | Nov 09 2010
| | Sample_last_update_date | Aug 03 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000.
| | Sample_data_processing | RMA summarization, log2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Robert,,Geffers
| | Sample_contact_email | robert.geffers@helmholtz-hzi.de
| | Sample_contact_phone | +49 531-6181-3058
| | Sample_contact_laboratory | Array Facility
| | Sample_contact_department | Dep. Cell Biology
| | Sample_contact_institute | HCI - Helmholtz Centre for Infection Research
| | Sample_contact_address | Inhoffenstr. 7
| | Sample_contact_city | Braunschweig
| | Sample_contact_zip/postal_code | 38124
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM621nnn/GSM621140/suppl/GSM621140.CEL.gz
| | Sample_series_id | GSE25244
| | Sample_data_row_count | 45101
| | |
|
GSM621141 | GPL1261 |
|
T_2 RNA INF1
|
kidney infected with Staphylococcus aureus
|
infection phase: T2
tissue: kidney
|
T_2 RNA INF1
|
| Sample_geo_accession | GSM621141
| | Sample_status | Public on Aug 03 2011
| | Sample_submission_date | Nov 09 2010
| | Sample_last_update_date | Aug 03 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000.
| | Sample_data_processing | RMA summarization, log2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Robert,,Geffers
| | Sample_contact_email | robert.geffers@helmholtz-hzi.de
| | Sample_contact_phone | +49 531-6181-3058
| | Sample_contact_laboratory | Array Facility
| | Sample_contact_department | Dep. Cell Biology
| | Sample_contact_institute | HCI - Helmholtz Centre for Infection Research
| | Sample_contact_address | Inhoffenstr. 7
| | Sample_contact_city | Braunschweig
| | Sample_contact_zip/postal_code | 38124
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM621nnn/GSM621141/suppl/GSM621141.CEL.gz
| | Sample_series_id | GSE25244
| | Sample_data_row_count | 45101
| | |
|
GSM621142 | GPL1261 |
|
T_2 RNA INF3
|
kidney infected with Staphylococcus aureus
|
infection phase: T2
tissue: kidney
|
T_2 RNA INF3
|
| Sample_geo_accession | GSM621142
| | Sample_status | Public on Aug 03 2011
| | Sample_submission_date | Nov 09 2010
| | Sample_last_update_date | Aug 03 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000.
| | Sample_data_processing | RMA summarization, log2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Robert,,Geffers
| | Sample_contact_email | robert.geffers@helmholtz-hzi.de
| | Sample_contact_phone | +49 531-6181-3058
| | Sample_contact_laboratory | Array Facility
| | Sample_contact_department | Dep. Cell Biology
| | Sample_contact_institute | HCI - Helmholtz Centre for Infection Research
| | Sample_contact_address | Inhoffenstr. 7
| | Sample_contact_city | Braunschweig
| | Sample_contact_zip/postal_code | 38124
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM621nnn/GSM621142/suppl/GSM621142.CEL.gz
| | Sample_series_id | GSE25244
| | Sample_data_row_count | 45101
| | |
|
GSM621143 | GPL1261 |
|
T_2 RNA INF4
|
kidney infected with Staphylococcus aureus
|
infection phase: T2
tissue: kidney
|
T_2 RNA INF4
|
| Sample_geo_accession | GSM621143
| | Sample_status | Public on Aug 03 2011
| | Sample_submission_date | Nov 09 2010
| | Sample_last_update_date | Aug 03 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000.
| | Sample_data_processing | RMA summarization, log2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Robert,,Geffers
| | Sample_contact_email | robert.geffers@helmholtz-hzi.de
| | Sample_contact_phone | +49 531-6181-3058
| | Sample_contact_laboratory | Array Facility
| | Sample_contact_department | Dep. Cell Biology
| | Sample_contact_institute | HCI - Helmholtz Centre for Infection Research
| | Sample_contact_address | Inhoffenstr. 7
| | Sample_contact_city | Braunschweig
| | Sample_contact_zip/postal_code | 38124
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM621nnn/GSM621143/suppl/GSM621143.CEL.gz
| | Sample_series_id | GSE25244
| | Sample_data_row_count | 45101
| | |
|
GSM621144 | GPL1261 |
|
T_28 RNA INF1
|
kidney infected with Staphylococcus aureus
|
infection phase: T28
tissue: kidney
|
T_28 RNA INF1
|
| Sample_geo_accession | GSM621144
| | Sample_status | Public on Aug 03 2011
| | Sample_submission_date | Nov 09 2010
| | Sample_last_update_date | Aug 03 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000.
| | Sample_data_processing | RMA summarization, log2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Robert,,Geffers
| | Sample_contact_email | robert.geffers@helmholtz-hzi.de
| | Sample_contact_phone | +49 531-6181-3058
| | Sample_contact_laboratory | Array Facility
| | Sample_contact_department | Dep. Cell Biology
| | Sample_contact_institute | HCI - Helmholtz Centre for Infection Research
| | Sample_contact_address | Inhoffenstr. 7
| | Sample_contact_city | Braunschweig
| | Sample_contact_zip/postal_code | 38124
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM621nnn/GSM621144/suppl/GSM621144.CEL.gz
| | Sample_series_id | GSE25244
| | Sample_data_row_count | 45101
| | |
|
GSM621145 | GPL1261 |
|
T_28 RNA INF6
|
kidney infected with Staphylococcus aureus
|
infection phase: T28
tissue: kidney
|
T_28 RNA INF6
|
| Sample_geo_accession | GSM621145
| | Sample_status | Public on Aug 03 2011
| | Sample_submission_date | Nov 09 2010
| | Sample_last_update_date | Aug 03 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000.
| | Sample_data_processing | RMA summarization, log2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Robert,,Geffers
| | Sample_contact_email | robert.geffers@helmholtz-hzi.de
| | Sample_contact_phone | +49 531-6181-3058
| | Sample_contact_laboratory | Array Facility
| | Sample_contact_department | Dep. Cell Biology
| | Sample_contact_institute | HCI - Helmholtz Centre for Infection Research
| | Sample_contact_address | Inhoffenstr. 7
| | Sample_contact_city | Braunschweig
| | Sample_contact_zip/postal_code | 38124
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM621nnn/GSM621145/suppl/GSM621145.CEL.gz
| | Sample_series_id | GSE25244
| | Sample_data_row_count | 45101
| | |
|
GSM621146 | GPL1261 |
|
T_28 RNA INF7
|
kidney infected with Staphylococcus aureus
|
infection phase: T28
tissue: kidney
|
T_28 RNA INF7
|
| Sample_geo_accession | GSM621146
| | Sample_status | Public on Aug 03 2011
| | Sample_submission_date | Nov 09 2010
| | Sample_last_update_date | Aug 03 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000.
| | Sample_data_processing | RMA summarization, log2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Robert,,Geffers
| | Sample_contact_email | robert.geffers@helmholtz-hzi.de
| | Sample_contact_phone | +49 531-6181-3058
| | Sample_contact_laboratory | Array Facility
| | Sample_contact_department | Dep. Cell Biology
| | Sample_contact_institute | HCI - Helmholtz Centre for Infection Research
| | Sample_contact_address | Inhoffenstr. 7
| | Sample_contact_city | Braunschweig
| | Sample_contact_zip/postal_code | 38124
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM621nnn/GSM621146/suppl/GSM621146.CEL.gz
| | Sample_series_id | GSE25244
| | Sample_data_row_count | 45101
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