Search results for the GEO ID: GSE25518  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM627468 | GPL570 |
|
HAZLAZ_01
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627468
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627468/suppl/GSM627468.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627469 | GPL570 |
|
HAZLAZ_02
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627469
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627469/suppl/GSM627469.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627470 | GPL570 |
|
HAZLAZ_03
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627470
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627470/suppl/GSM627470.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627471 | GPL570 |
|
HAZLAZ_04
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627471
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627471/suppl/GSM627471.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627472 | GPL570 |
|
HAZLAZ_05
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627472
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627472/suppl/GSM627472.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627473 | GPL570 |
|
HAZLAZ_06
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627473
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627473/suppl/GSM627473.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627474 | GPL570 |
|
HAZLAZ_07
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627474
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627474/suppl/GSM627474.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627475 | GPL570 |
|
HAZLAZ_08
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627475
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627475/suppl/GSM627475.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627476 | GPL570 |
|
HAZLAZ_09
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627476
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627476/suppl/GSM627476.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627477 | GPL570 |
|
HAZLAZ_10
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627477
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627477/suppl/GSM627477.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627478 | GPL570 |
|
HAZLAZ_11
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627478
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627478/suppl/GSM627478.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627479 | GPL570 |
|
HAZLAZ_12
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627479
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627479/suppl/GSM627479.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627480 | GPL570 |
|
HAZLAZ_16
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627480
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627480/suppl/GSM627480.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627481 | GPL570 |
|
HAZLAZ_17
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627481
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627481/suppl/GSM627481.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627482 | GPL570 |
|
HAZLAZ_18
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627482
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627482/suppl/GSM627482.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627483 | GPL570 |
|
HAZLAZ_21
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627483
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627483/suppl/GSM627483.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627484 | GPL570 |
|
HAZLAZ_29
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627484
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627484/suppl/GSM627484.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627485 | GPL570 |
|
HAZLAZ_30
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627485
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627485/suppl/GSM627485.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627486 | GPL570 |
|
HAZLAZ_32
|
Primary biopsy
|
tissue: testicular biopsies with cryptorchidism
|
Total RNA
|
| Sample_geo_accession | GSM627486
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627486/suppl/GSM627486.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627487 | GPL570 |
|
Control_24
|
Primary biopsy
|
tissue: contralateral descended testes
|
Total RNA
|
| Sample_geo_accession | GSM627487
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627487/suppl/GSM627487.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627488 | GPL570 |
|
Control_25
|
Primary biopsy
|
tissue: contralateral descended testes
|
Total RNA
|
| Sample_geo_accession | GSM627488
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627488/suppl/GSM627488.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627489 | GPL570 |
|
Control_26
|
Primary biopsy
|
tissue: contralateral descended testes
|
Total RNA
|
| Sample_geo_accession | GSM627489
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627489/suppl/GSM627489.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
GSM627490 | GPL570 |
|
Control_27
|
Primary biopsy
|
tissue: contralateral descended testes
|
Total RNA
|
| Sample_geo_accession | GSM627490
| | Sample_status | Public on Nov 23 2010
| | Sample_submission_date | Nov 20 2010
| | Sample_last_update_date | Nov 28 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As per Affymetrix's recommendations
| | Sample_hyb_protocol | As per Affymetrix's recommendations
| | Sample_scan_protocol | As per Affymetrix's recommendations
| | Sample_data_processing | RMA signal condensation performed. The RMA was done using justRMA() from bioconductor in R-2.9.2.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Edward,James,Oakeley
| | Sample_contact_email | edward.oakeley@fmi.ch
| | Sample_contact_institute | Friedrich Miescher Institute for Biomedical Research
| | Sample_contact_address | Maulbeerstrasse 66
| | Sample_contact_city | Basel
| | Sample_contact_zip/postal_code | 4058
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM627nnn/GSM627490/suppl/GSM627490.CEL.gz
| | Sample_series_id | GSE25518
| | Sample_data_row_count | 54675
| | |
|
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