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Process data
Search results for the GEO ID: GSE25604
(Click on the check boxes provided under "Select for analysis", to initiate grouping)
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group.
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GSM ID
GPL ID
Select for analysis
Title
Source name
Description
Characteristics
GSM629283
GPL571
Ependymal tissue 01
LMPC cells of ependymal tissue
tissue: ependymal tissue malignancy: non neoplastic
Gene expression of non neoplastic ependymal cells
GSM629284
GPL571
Ependymal tissue 02
LMPC cells of ependymal tissue
tissue: ependymal tissue malignancy: non neoplastic
Gene expression of non neoplastic ependymal cells
GSM629285
GPL571
Ependymal tissue 03
LMPC cells of ependymal tissue
tissue: ependymal tissue malignancy: non neoplastic
Gene expression of non neoplastic ependymal cells
GSM629286
GPL571
Ependymal tissue 04
LMPC cells of ependymal tissue
tissue: ependymal tissue malignancy: non neoplastic
Gene expression of non neoplastic ependymal cells
GSM629287
GPL571
Ependymal tissue 05
LMPC cells of ependymal tissue
tissue: ependymal tissue malignancy: non neoplastic
Gene expression of non neoplastic ependymal cells
GSM629288
GPL571
Ependymal tissue 06
LMPC cells of ependymal tissue
tissue: ependymal tissue malignancy: non neoplastic
Gene expression of non neoplastic ependymal cells
GSM629289
GPL571
Ependymal tissue 07
LMPC cells of ependymal tissue
tissue: ependymal tissue malignancy: non neoplastic
Gene expression of non neoplastic ependymal cells
GSM629290
GPL571
Ependymoma 01
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629291
GPL571
Ependymoma 02
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629292
GPL571
Ependymoma 03
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629293
GPL571
Ependymoma 04
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629294
GPL571
Ependymoma 05
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629295
GPL571
Ependymoma 06
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629296
GPL571
Ependymoma 07
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629297
GPL571
Ependymoma 08
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629298
GPL571
Ependymoma 09
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629299
GPL571
Ependymoma 10
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629300
GPL571
Ependymoma 11
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629301
GPL571
Ependymoma 12
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629302
GPL571
Ependymoma 13
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629303
GPL571
Ependymoma 14
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
GSM629304
GPL571
Ependymoma 15
LMPC cells of ependymoma tissue
tissue: ependymoma tissue malignancy: neoplastic
Gene expression of ependymoma tumor cells
Make groups for comparisons
(2 groups will be compared at a time)
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Select expression type
Transcripts profile based on;
A. Differential status (Up/Down regulation)
Regulation type
Up
Down
Up/Down
Fold change
2
4
6
8
10
p-value
0.05
0.01
0.001
0.0001
0.00001
B. Absolute calls (Transcribed/Not-detected)
Derive calls within/across groups
Within groups
Detection status
Transcribed
Not-detected
Both
Percentage detection
10
20
30
40
50
60
70
80
90
100
Across groups
Detection status
First group:
Transcribed
Not-detected
-
Second group:
Transcribed
Not-detected
Percentage detection
First group:
10
20
30
40
50
60
70
80
90
100
-
Second group:
10
20
30
40
50
60
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100
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