Search results for the GEO ID: GSE26114  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM641483 | GPL570 |
|
MV4-11 Control, biological rep1
|
MV4-11 DMSO treated
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with DMSO as control.
|
| Sample_geo_accession | GSM641483
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641483/suppl/GSM641483.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641484 | GPL570 |
|
MV4-11 Control, biological rep2
|
MV4-11 DMSO treated
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with DMSO as control.
|
| Sample_geo_accession | GSM641484
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641484/suppl/GSM641484.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641485 | GPL570 |
|
MV4-11 Control, biological rep3
|
MV4-11 DMSO treated
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with DMSO as control.
|
| Sample_geo_accession | GSM641485
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641485/suppl/GSM641485.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641486 | GPL570 |
|
MV4-11 ABT-869, biological rep1
|
MV4-11 ABT-869 treated
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with ABT-869.
|
| Sample_geo_accession | GSM641486
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641486/suppl/GSM641486.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641487 | GPL570 |
|
MV4-11 ABT-869, biological rep2
|
MV4-11 ABT-869 treated
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with ABT-869.
|
| Sample_geo_accession | GSM641487
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641487/suppl/GSM641487.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641488 | GPL570 |
|
MV4-11 ABT-869, biological rep3
|
MV4-11 ABT-869 treated
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with ABT-869.
|
| Sample_geo_accession | GSM641488
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641488/suppl/GSM641488.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641489 | GPL570 |
|
MV4-11 SAHA, biological rep1
|
MV4-11 SAHA treated
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with SAHA.
|
| Sample_geo_accession | GSM641489
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641489/suppl/GSM641489.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641490 | GPL570 |
|
MV4-11 SAHA, biological rep2
|
MV4-11 SAHA treated
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with SAHA.
|
| Sample_geo_accession | GSM641490
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641490/suppl/GSM641490.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641491 | GPL570 |
|
MV4-11 SAHA, biological rep3
|
MV4-11 SAHA treated
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with SAHA.
|
| Sample_geo_accession | GSM641491
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641491/suppl/GSM641491.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641492 | GPL570 |
|
MV4-11 Combination, biological rep1
|
MV4-11 Combination treatment
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with ABT-869 and SAHA.
|
| Sample_geo_accession | GSM641492
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641492/suppl/GSM641492.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641493 | GPL570 |
|
MV4-11 Combination, biological rep2
|
MV4-11 Combination treatment
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with ABT-869 and SAHA.
|
| Sample_geo_accession | GSM641493
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641493/suppl/GSM641493.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641494 | GPL570 |
|
MV4-11 Combination, biological rep3
|
MV4-11 Combination treatment
|
cell type: AML cells
cell line: MV4-11
|
MV4-11 cells were treated with ABT-869 and SAHA.
|
| Sample_geo_accession | GSM641494
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641494/suppl/GSM641494.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641495 | GPL570 |
|
MOLM-14 Control, biological rep1
|
MOLM-14 DMSO treated
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with DMSO as control.
|
| Sample_geo_accession | GSM641495
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641495/suppl/GSM641495.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641496 | GPL570 |
|
MOLM-14 Control, biological rep2
|
MOLM-14 DMSO treated
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with DMSO as control.
|
| Sample_geo_accession | GSM641496
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641496/suppl/GSM641496.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641497 | GPL570 |
|
MOLM-14 Control, biological rep3
|
MOLM-14 DMSO treated
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with DMSO as control.
|
| Sample_geo_accession | GSM641497
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641497/suppl/GSM641497.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641498 | GPL570 |
|
MOLM-14 ABT-869, biological rep1
|
MOLM-14 ABT-869 treated
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with ABT-869.
|
| Sample_geo_accession | GSM641498
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641498/suppl/GSM641498.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641499 | GPL570 |
|
MOLM-14 ABT-869, biological rep2
|
MOLM-14 ABT-869 treated
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with ABT-869.
|
| Sample_geo_accession | GSM641499
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641499/suppl/GSM641499.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641500 | GPL570 |
|
MOLM-14 ABT-869, biological rep3
|
MOLM-14 ABT-869 treated
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with ABT-869.
|
| Sample_geo_accession | GSM641500
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641500/suppl/GSM641500.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641501 | GPL570 |
|
MOLM-14 SAHA, biological rep1
|
MOLM-14 SAHA treated
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with SAHA.
|
| Sample_geo_accession | GSM641501
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641501/suppl/GSM641501.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641502 | GPL570 |
|
MOLM-14 SAHA, biological rep2
|
MOLM-14 SAHA treated
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with SAHA.
|
| Sample_geo_accession | GSM641502
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641502/suppl/GSM641502.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641503 | GPL570 |
|
MOLM-14 SAHA, biological rep3
|
MOLM-14 SAHA treated
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with SAHA.
|
| Sample_geo_accession | GSM641503
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641503/suppl/GSM641503.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641504 | GPL570 |
|
MOLM-14 Combination, biological rep1
|
MOLM-14 Combination treatment
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with ABT-869 and SAHA.
|
| Sample_geo_accession | GSM641504
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641504/suppl/GSM641504.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641505 | GPL570 |
|
MOLM-14 Combination, biological rep2
|
MOLM-14 Combination treatment
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with ABT-869 and SAHA.
|
| Sample_geo_accession | GSM641505
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641505/suppl/GSM641505.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
GSM641506 | GPL570 |
|
MOLM-14 Combination, biological rep3
|
MOLM-14 Combination treatment
|
cell type: AML cells
cell line: MOLM-14
|
MOLM-14 cells were treated with ABT-869 and SAHA.
|
| Sample_geo_accession | GSM641506
| | Sample_status | Public on May 31 2011
| | Sample_submission_date | Dec 16 2010
| | Sample_last_update_date | May 31 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | DMSO, ABT-869, SAHA or Combinaiton (ABT-869 + SAHA)
| | Sample_growth_protocol_ch1 | 90% RPMI1640 + 10% FBS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Midi Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with Genespring GX7.3.1
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jianbiao,,Zhou
| | Sample_contact_email | jianbiaozhou@yahoo.com
| | Sample_contact_institute | Cancer Science Institute Singapore
| | Sample_contact_address | 28 Medical Drive
| | Sample_contact_city | Singapore
| | Sample_contact_zip/postal_code | 117456
| | Sample_contact_country | Singapore
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM641nnn/GSM641506/suppl/GSM641506.CEL.gz
| | Sample_series_id | GSE26114
| | Sample_data_row_count | 54675
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
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