Sample_geo_accession | GSM650992
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Sample_status | Public on Jan 07 2011
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Sample_submission_date | Jan 06 2011
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Sample_last_update_date | Jan 07 2011
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Sample_type | RNA
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Sample_channel_count | 1
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Sample_organism_ch1 | Homo sapiens
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Sample_taxid_ch1 | 9606
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Sample_treatment_protocol_ch1 | No treatment done
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Sample_growth_protocol_ch1 | Adherant HeLa (ATCC CCL-2) cells were maintained in DMEM/high glucose (Hyclone, Thermo Scientific) in the presence of 10% DCS and 1X penicillin/streptomycin at in 5% CO2 37 degrees.
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Sample_molecule_ch1 | total RNA
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Sample_extract_protocol_ch1 | Total RNA extraction is according to the manufacturer's instructions (Invitrogen) using Trizole reagent.
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Sample_label_ch1 | biotin
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Sample_label_protocol_ch1 | Samples were processed and labeled according to Affymetrix protocols.
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Sample_hyb_protocol | Hybridizations were performed as directed by the manufacturer.
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Sample_scan_protocol | The microarray was scanned using a GeneChIP Scanner 3000.
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Sample_data_processing | The data was analyed using GeneChIP Operating Software (GCOS; Affymetrix).
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Sample_data_processing | Transcript signal was mapped against the chromosome coordinates (probe-by-probe basis) using the HG-U133A_2 Annotations CSV file for hg18 build of the human genome provided by Affymetrix.
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Sample_platform_id | GPL570
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Sample_contact_name | Anindya,,Dutta
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Sample_contact_email | ad8q@virginia.edu
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Sample_contact_laboratory | Dutta Lab
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Sample_contact_department | Biochemistry & Molecular Genetics
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Sample_contact_institute | University Of Virginia
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Sample_contact_address | 1300 Jefferson Park Ave
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Sample_contact_city | Charlottesville
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Sample_contact_state | VA
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Sample_contact_zip/postal_code | 22908
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Sample_contact_country | USA
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Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM650nnn/GSM650992/suppl/GSM650992.CEL.gz
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Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM650nnn/GSM650992/suppl/GSM650992.CHP.gz
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Sample_series_id | GSE26471
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Sample_data_row_count | 54675
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