Search results for the GEO ID: GSE26476  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM651194 | GPL1261 |
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Adult Lung_IL4RA-ko-SMP8-IL4RA-het+IL13_rep1
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adult mouse whole lung, IL4R KO, SMP8-IL4R transgenic
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strain/background: BALB/c
developmental stage: adult
tissue: whole lung
il4r genotype: -/-
smp8-il4r transgene: +/-
treatment: IL13
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SMP8_IL4RA-het_1
Lungs isolated from mice that were treated with IL13 whose genotype was IL4R -/-, SMP8-IL4R transgenic +/-, BALB/c background; replicate pool #1.
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| Sample_geo_accession | GSM651194
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with 2-3 micrograms of IL-13, intratracheally 1x/day x 7 days. Lungs were collected 24 hours after final administration.
| | Sample_growth_protocol_ch1 | Microisolator housed mice in clean mouse facility.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix labeling protocol to generate biotinylated cRNA applied to 2ug total RNA for MOE 430 plus 2.0 GeneChip.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse MOE 430 Plus 2.0 Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneArray Scanner.
| | Sample_data_processing | RMA processing of CEL files, standard Affymetrix CDF.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Bruce,J,Aronow
| | Sample_contact_email | bruce.aronow@chmcc.org
| | Sample_contact_phone | 513-636-4865
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address |
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651194/suppl/GSM651194.CEL.gz
| | Sample_series_id | GSE26476
| | Sample_data_row_count | 45101
| | |
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GSM651195 | GPL1261 |
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Adult Lung_IL4RA-ko-SMP8-IL4RA-het+IL13_rep2
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adult mouse whole lung, IL4R KO, SMP8-IL4R transgenic
|
strain/background: BALB/c
developmental stage: adult
tissue: whole lung
il4r genotype: -/-
smp8-il4r transgene: +/-
treatment: IL13
|
SMP8_IL4RA-het_2
Lungs isolated from mice that were treated with IL13 whose genotype was IL4R -/-, SMP8-IL4R transgenic +/-, BALB/c background; replicate pool #2.
|
| Sample_geo_accession | GSM651195
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with 2-3 micrograms of IL-13, intratracheally 1x/day x 7 days. Lungs were collected 24 hours after final administration.
| | Sample_growth_protocol_ch1 | Microisolator housed mice in clean mouse facility.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix labeling protocol to generate biotinylated cRNA applied to 2ug total RNA for MOE 430 plus 2.0 GeneChip.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse MOE 430 Plus 2.0 Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneArray Scanner.
| | Sample_data_processing | RMA processing of CEL files, standard Affymetrix CDF.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Bruce,J,Aronow
| | Sample_contact_email | bruce.aronow@chmcc.org
| | Sample_contact_phone | 513-636-4865
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address |
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651195/suppl/GSM651195.CEL.gz
| | Sample_series_id | GSE26476
| | Sample_data_row_count | 45101
| | |
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GSM651196 | GPL1261 |
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Adult Lung_IL4RA-ko+IL13_rep1
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adult mouse whole lung, IL4R KO
|
strain/background: BALB/c
developmental stage: adult
tissue: whole lung
il4r genotype: -/-
smp8-il4r transgene: -/-
treatment: IL13
|
SMP8_IL4RA-ko_1
Lungs isolated from mice that were treated with IL13 whose genotype was IL4R -/-, BALB/c background; replicate pool #1.
|
| Sample_geo_accession | GSM651196
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with 2-3 micrograms of IL-13, intratracheally 1x/day x 7 days. Lungs were collected 24 hours after final administration.
| | Sample_growth_protocol_ch1 | Microisolator housed mice in clean mouse facility.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix labeling protocol to generate biotinylated cRNA applied to 2ug total RNA for MOE 430 plus 2.0 GeneChip.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse MOE 430 Plus 2.0 Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneArray Scanner.
| | Sample_data_processing | RMA processing of CEL files, standard Affymetrix CDF.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Bruce,J,Aronow
| | Sample_contact_email | bruce.aronow@chmcc.org
| | Sample_contact_phone | 513-636-4865
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address |
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651196/suppl/GSM651196.CEL.gz
| | Sample_series_id | GSE26476
| | Sample_data_row_count | 45101
| | |
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GSM651197 | GPL1261 |
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Adult Lung_IL4RA-ko+IL13_rep2
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adult mouse whole lung, IL4R KO
|
strain/background: BALB/c
developmental stage: adult
tissue: whole lung
il4r genotype: -/-
smp8-il4r transgene: -/-
treatment: IL13
|
SMP8_IL4RA-ko_2
Lungs isolated from mice that were treated with IL13 whose genotype was IL4R -/-, BALB/c background; replicate pool #2.
|
| Sample_geo_accession | GSM651197
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with 2-3 micrograms of IL-13, intratracheally 1x/day x 7 days. Lungs were collected 24 hours after final administration.
| | Sample_growth_protocol_ch1 | Microisolator housed mice in clean mouse facility.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix labeling protocol to generate biotinylated cRNA applied to 2ug total RNA for MOE 430 plus 2.0 GeneChip.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse MOE 430 Plus 2.0 Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneArray Scanner.
| | Sample_data_processing | RMA processing of CEL files, standard Affymetrix CDF.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Bruce,J,Aronow
| | Sample_contact_email | bruce.aronow@chmcc.org
| | Sample_contact_phone | 513-636-4865
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address |
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651197/suppl/GSM651197.CEL.gz
| | Sample_series_id | GSE26476
| | Sample_data_row_count | 45101
| | |
|
GSM651198 | GPL1261 |
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Adult Lung_wt1+IL13_rep1
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adult mouse whole lung, WT
|
strain/background: BALB/c
developmental stage: adult
tissue: whole lung
il4r genotype: +/+
smp8-il4r transgene: -/-
treatment: IL13
|
WT_1
Lungs isolated from mice that were treated with IL13 whose genotype was WT, BALB/c background; replicate pool #1.
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| Sample_geo_accession | GSM651198
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with 2-3 micrograms of IL-13, intratracheally 1x/day x 7 days. Lungs were collected 24 hours after final administration.
| | Sample_growth_protocol_ch1 | Microisolator housed mice in clean mouse facility.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix labeling protocol to generate biotinylated cRNA applied to 2ug total RNA for MOE 430 plus 2.0 GeneChip.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse MOE 430 Plus 2.0 Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneArray Scanner.
| | Sample_data_processing | RMA processing of CEL files, standard Affymetrix CDF.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Bruce,J,Aronow
| | Sample_contact_email | bruce.aronow@chmcc.org
| | Sample_contact_phone | 513-636-4865
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address |
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651198/suppl/GSM651198.CEL.gz
| | Sample_series_id | GSE26476
| | Sample_data_row_count | 45101
| | |
|
GSM651199 | GPL1261 |
|
Adult Lung_wt1+IL13_rep2
|
adult mouse whole lung, WT
|
strain/background: BALB/c
developmental stage: adult
tissue: whole lung
il4r genotype: +/+
smp8-il4r transgene: -/-
treatment: IL13
|
WT_2
Lungs isolated from mice that were treated with IL13 whose genotype was WT, BALB/c background; replicate pool #2.
|
| Sample_geo_accession | GSM651199
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with 2-3 micrograms of IL-13, intratracheally 1x/day x 7 days. Lungs were collected 24 hours after final administration.
| | Sample_growth_protocol_ch1 | Microisolator housed mice in clean mouse facility.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix labeling protocol to generate biotinylated cRNA applied to 2ug total RNA for MOE 430 plus 2.0 GeneChip.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse MOE 430 Plus 2.0 Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneArray Scanner.
| | Sample_data_processing | RMA processing of CEL files, standard Affymetrix CDF.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Bruce,J,Aronow
| | Sample_contact_email | bruce.aronow@chmcc.org
| | Sample_contact_phone | 513-636-4865
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address |
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651199/suppl/GSM651199.CEL.gz
| | Sample_series_id | GSE26476
| | Sample_data_row_count | 45101
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