Search results for the GEO ID: GSE26487  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM651309 | GPL8300 |
|
Keratinocytes, untreated 1h, rep1
|
Epidermal keratinocytes, untreated control, 1h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 1h
|
Ctrl-1hr-exp I
|
| Sample_geo_accession | GSM651309
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651309/suppl/GSM651309.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651310 | GPL8300 |
|
Keratinocytes, untreated 4h, rep1
|
Epidermal keratinocytes, untreated control, 4h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 4h
|
Ctrl-4hrs-exp I
|
| Sample_geo_accession | GSM651310
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651310/suppl/GSM651310.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651311 | GPL8300 |
|
Keratinocytes, untreated 24h, rep1
|
Epidermal keratinocytes, untreated control, 24h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 24h
|
Ctrl-24hrs-exp I
|
| Sample_geo_accession | GSM651311
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651311/suppl/GSM651311.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651312 | GPL8300 |
|
Keratinocytes, untreated 48h, rep1
|
Epidermal keratinocytes, untreated control, 48h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 48h
|
Ctrl 48hrs-exp I
|
| Sample_geo_accession | GSM651312
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651312/suppl/GSM651312.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651313 | GPL8300 |
|
Keratinocytes, untreated 72h, rep1
|
Epidermal keratinocytes, untreated control, 72h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 72h
|
Ctrl-72hrs-exp I
|
| Sample_geo_accession | GSM651313
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651313/suppl/GSM651313.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651314 | GPL8300 |
|
Keratinocytes, DEX-treated 1h, rep1
|
Epidermal keratinocytes, dexamethasone-treated, 1h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 1h
|
Dex-1hr-exp I
|
| Sample_geo_accession | GSM651314
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651314/suppl/GSM651314.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651315 | GPL8300 |
|
Keratinocytes, DEX-treated 4h, rep1
|
Epidermal keratinocytes, dexamethasone-treated, 4h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 4h
|
Dex-4hrs-Exp I
|
| Sample_geo_accession | GSM651315
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651315/suppl/GSM651315.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651316 | GPL8300 |
|
Keratinocytes, DEX-treated 24h, rep1
|
Epidermal keratinocytes, dexamethasone-treated, 24h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 24h
|
Dex-24hrs-exp I
|
| Sample_geo_accession | GSM651316
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651316/suppl/GSM651316.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651317 | GPL8300 |
|
Keratinocytes, DEX-treated 48h, rep1
|
Epidermal keratinocytes, dexamethasone-treated, 48h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 48h
|
Dex-48hrs- expI
|
| Sample_geo_accession | GSM651317
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651317/suppl/GSM651317.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651318 | GPL8300 |
|
Keratinocytes, DEX-treated 72h, rep1
|
Epidermal keratinocytes, dexamethasone-treated, 72h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 72h
|
Dex-72hrs- Exp I
|
| Sample_geo_accession | GSM651318
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651318/suppl/GSM651318.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651319 | GPL8300 |
|
Keratinocytes, untreated 1h, rep2
|
Epidermal keratinocytes, untreated control, 1h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 1h
|
ctrl-1hr-exp II
|
| Sample_geo_accession | GSM651319
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651319/suppl/GSM651319.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651320 | GPL8300 |
|
Keratinocytes, untreated 4h, rep2
|
Epidermal keratinocytes, untreated control, 4h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 4h
|
Ctrl- 4hrs-exp II
|
| Sample_geo_accession | GSM651320
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651320/suppl/GSM651320.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651321 | GPL8300 |
|
Keratinocytes, untreated 24h, rep2
|
Epidermal keratinocytes, untreated control, 24h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 24h
|
Ctrl- 24hrs-exp II
|
| Sample_geo_accession | GSM651321
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651321/suppl/GSM651321.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651322 | GPL8300 |
|
Keratinocytes, untreated 48h, rep2
|
Epidermal keratinocytes, untreated control, 48h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 48h
|
Ctrl-48hrs-expII
|
| Sample_geo_accession | GSM651322
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651322/suppl/GSM651322.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651323 | GPL8300 |
|
Keratinocytes, untreated 72h, rep2
|
Epidermal keratinocytes, untreated control, 72h
|
cell type: primary epidermal keratinocytes
treatment: none
treatment duration: 72h
|
Ctrl- 72hrs-exp II
|
| Sample_geo_accession | GSM651323
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651323/suppl/GSM651323.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651324 | GPL8300 |
|
Keratinocytes, DEX-treated 1h, rep2
|
Epidermal keratinocytes, dexamethasone-treated, 1h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 1h
|
Dex-1hr-expII
|
| Sample_geo_accession | GSM651324
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651324/suppl/GSM651324.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651325 | GPL8300 |
|
Keratinocytes, DEX-treated 4h, rep2
|
Epidermal keratinocytes, dexamethasone-treated, 4h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 4h
|
Dex-4hrs-expII
|
| Sample_geo_accession | GSM651325
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651325/suppl/GSM651325.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651326 | GPL8300 |
|
Keratinocytes, DEX-treated 24h, rep2
|
Epidermal keratinocytes, dexamethasone-treated, 24h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 24h
|
dex-24hrs-exp II
|
| Sample_geo_accession | GSM651326
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651326/suppl/GSM651326.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651327 | GPL8300 |
|
Keratinocytes, DEX-treated 48h, rep2
|
Epidermal keratinocytes, dexamethasone-treated, 48h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 48h
|
Dex-48hrs-exp II
|
| Sample_geo_accession | GSM651327
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651327/suppl/GSM651327.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
GSM651328 | GPL8300 |
|
Keratinocytes, DEX-treated 72h, rep2
|
Epidermal keratinocytes, dexamethasone-treated, 72h
|
cell type: primary epidermal keratinocytes
treatment: dexamethasone
treatment duration: 72h
|
Dex-72hrs-exp II
|
| Sample_geo_accession | GSM651328
| | Sample_status | Public on Jan 07 2011
| | Sample_submission_date | Jan 06 2011
| | Sample_last_update_date | Jan 07 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | ~70% confluent keratinocytes were treated with 0.1μM DEX (Sigma).
| | Sample_growth_protocol_ch1 | Standard growth protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard extraction protocol (e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642 (PMID 15145954)).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix protocol.
| | Sample_hyb_protocol | Standard Affymetrix protocol.
| | Sample_scan_protocol | Standard Affymetrix protocol.
| | Sample_data_processing | MAS5 GCOS, RMAExpress summarized using PLM and log2 transformed.
| | Sample_platform_id | GPL8300
| | Sample_contact_name | Miki,,Blumenberg
| | Sample_contact_email | blumem01@med.nyu.edu
| | Sample_contact_phone | 212 263-5924
| | Sample_contact_fax | 212 263-8752
| | Sample_contact_laboratory | Blumenberg
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | NYU School of Medicine
| | Sample_contact_address | 550 First Ave
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM651nnn/GSM651328/suppl/GSM651328.CEL.gz
| | Sample_series_id | GSE26487
| | Sample_data_row_count | 12625
| | |
|
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| |
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(2 groups will be compared at a time) |
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