Search results for the GEO ID: GSE26616 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM655048 | GPL1261 |
|
Ezh1/2 2KO FACS purified basal epidermal cells
|
Mouse skin cells
|
strain: mixed background C57B6 and CD1
Sex: female
age: 14 days
tissue: skin
genotype: Ezh1/2 2KO
cell type: basal epidermal cells
|
|
Sample_geo_accession | GSM655048
| Sample_status | Public on Jun 09 2011
| Sample_submission_date | Jan 13 2011
| Sample_last_update_date | Jun 16 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Quigen mRNA kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | 3IVT (affymetrix) with a 16hr IVT step
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | Arrays were scanned per the manufacturers specifications for the Affymetrix MOE430v2 chip.
| Sample_data_processing | MAS5 values in the sample data tables with overall intensity targeted to 500. Images were background-subtracted. Probesets were identified as differentially expressed when the absolute fold change was 2. Probesets selected for visualization were log2 transformed and were analyzed with hierarchical clustering (Pearson correlation, average linkage), and visualized with heatmaps to assist in interpretation.
| Sample_platform_id | GPL1261
| Sample_contact_name | Elena,,Ezhkova
| Sample_contact_email | elena.ezhkova@mssm.edu
| Sample_contact_phone | 6468841410
| Sample_contact_department | DRB
| Sample_contact_institute | MSSM
| Sample_contact_address | 1428 Madison Avenue, Atran Building, AB7-10B
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10128
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655048/suppl/GSM655048.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655048/suppl/GSM655048.CHP.gz
| Sample_series_id | GSE26616
| Sample_data_row_count | 45101
| |
|
GSM655053 | GPL1261 |
|
Ezh1/2 2KO FACS purified matrix cells
|
Mouse skin cells
|
strain: mixed background C57B6 and CD1
Sex: female and male
age: 14 days
tissue: skin
genotype: Ezh1/2 2KO
cell type: matrix cells
|
|
Sample_geo_accession | GSM655053
| Sample_status | Public on Jun 09 2011
| Sample_submission_date | Jan 13 2011
| Sample_last_update_date | Jun 16 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Quigen mRNA kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | 3IVT (affymetrix) with a 16hr IVT step
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | Arrays were scanned per the manufacturers specifications for the Affymetrix MOE430v2 chip.
| Sample_data_processing | MAS5 values in the sample data tables with overall intensity targeted to 500. Images were background-subtracted. Probesets were identified as differentially expressed when the absolute fold change was 2. Probesets selected for visualization were log2 transformed and were analyzed with hierarchical clustering (Pearson correlation, average linkage), and visualized with heatmaps to assist in interpretation.
| Sample_platform_id | GPL1261
| Sample_contact_name | Elena,,Ezhkova
| Sample_contact_email | elena.ezhkova@mssm.edu
| Sample_contact_phone | 6468841410
| Sample_contact_department | DRB
| Sample_contact_institute | MSSM
| Sample_contact_address | 1428 Madison Avenue, Atran Building, AB7-10B
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10128
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655053/suppl/GSM655053.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655053/suppl/GSM655053.CHP.gz
| Sample_series_id | GSE26616
| Sample_data_row_count | 45101
| |
|
GSM655062 | GPL1261 |
|
Ezh1/2 2KO FACS purified ORS cells
|
Mouse skin cells
|
strain: mixed background C57B6 and CD1
Sex: female and male
age: 14 days
tissue: skin
genotype: Ezh1/2 2KO
cell type: ORS cells
|
|
Sample_geo_accession | GSM655062
| Sample_status | Public on Jun 09 2011
| Sample_submission_date | Jan 13 2011
| Sample_last_update_date | Jun 16 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Quigen mRNA kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | 3IVT (affymetrix) with a 16hr IVT step
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | Arrays were scanned per the manufacturers specifications for the Affymetrix MOE430v2 chip.
| Sample_data_processing | MAS5 values in the sample data tables with overall intensity targeted to 500. Images were background-subtracted. Probesets were identified as differentially expressed when the absolute fold change was 2. Probesets selected for visualization were log2 transformed and were analyzed with hierarchical clustering (Pearson correlation, average linkage), and visualized with heatmaps to assist in interpretation.
| Sample_platform_id | GPL1261
| Sample_contact_name | Elena,,Ezhkova
| Sample_contact_email | elena.ezhkova@mssm.edu
| Sample_contact_phone | 6468841410
| Sample_contact_department | DRB
| Sample_contact_institute | MSSM
| Sample_contact_address | 1428 Madison Avenue, Atran Building, AB7-10B
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10128
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655062/suppl/GSM655062.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655062/suppl/GSM655062.CHP.gz
| Sample_series_id | GSE26616
| Sample_data_row_count | 45101
| |
|
GSM655071 | GPL1261 |
|
Ezh1/2 WT FACS purified basal epidermal cells
|
Mouse skin cells
|
strain: mixed background C57B6 and CD1
Sex: female and male
age: 14 days
tissue: skin
genotype: Ezh1/2 WT
cell type: basal epidermal cells
|
|
Sample_geo_accession | GSM655071
| Sample_status | Public on Jun 09 2011
| Sample_submission_date | Jan 13 2011
| Sample_last_update_date | Jun 16 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Quigen mRNA kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | 3IVT (affymetrix) with a 16hr IVT step
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | Arrays were scanned per the manufacturers specifications for the Affymetrix MOE430v2 chip.
| Sample_data_processing | MAS5 values in the sample data tables with overall intensity targeted to 500. Images were background-subtracted. Probesets were identified as differentially expressed when the absolute fold change was 2. Probesets selected for visualization were log2 transformed and were analyzed with hierarchical clustering (Pearson correlation, average linkage), and visualized with heatmaps to assist in interpretation.
| Sample_platform_id | GPL1261
| Sample_contact_name | Elena,,Ezhkova
| Sample_contact_email | elena.ezhkova@mssm.edu
| Sample_contact_phone | 6468841410
| Sample_contact_department | DRB
| Sample_contact_institute | MSSM
| Sample_contact_address | 1428 Madison Avenue, Atran Building, AB7-10B
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10128
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655071/suppl/GSM655071.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655071/suppl/GSM655071.CHP.gz
| Sample_series_id | GSE26616
| Sample_data_row_count | 45101
| |
|
GSM655112 | GPL1261 |
|
Ezh1/2 WT FACS purified matrix cells
|
Mouse skin cells
|
strain: mixed background C57B6 and CD1
Sex: female and male
age: 14 days
tissue: skin
genotype: Ezh1/2 WT
cell type: matrix cells
|
|
Sample_geo_accession | GSM655112
| Sample_status | Public on Jun 09 2011
| Sample_submission_date | Jan 13 2011
| Sample_last_update_date | Jun 16 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Quigen mRNA kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | 3IVT (affymetrix) with a 16hr IVT step
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | Arrays were scanned per the manufacturers specifications for the Affymetrix MOE430v2 chip.
| Sample_data_processing | MAS5 values in the sample data tables with overall intensity targeted to 500. Images were background-subtracted. Probesets were identified as differentially expressed when the absolute fold change was 2. Probesets selected for visualization were log2 transformed and were analyzed with hierarchical clustering (Pearson correlation, average linkage), and visualized with heatmaps to assist in interpretation.
| Sample_platform_id | GPL1261
| Sample_contact_name | Elena,,Ezhkova
| Sample_contact_email | elena.ezhkova@mssm.edu
| Sample_contact_phone | 6468841410
| Sample_contact_department | DRB
| Sample_contact_institute | MSSM
| Sample_contact_address | 1428 Madison Avenue, Atran Building, AB7-10B
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10128
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655112/suppl/GSM655112.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655112/suppl/GSM655112.CHP.gz
| Sample_series_id | GSE26616
| Sample_data_row_count | 45101
| |
|
GSM655116 | GPL1261 |
|
Ezh1/2 WT FACS purified ORS cells
|
Mouse skin cells
|
strain: mixed background C57B6 and CD1
Sex: female and male
age: 14 days
tissue: skin
genotype: Ezh1/2 WT
cell type: ORS cells
|
|
Sample_geo_accession | GSM655116
| Sample_status | Public on Jun 09 2011
| Sample_submission_date | Jan 13 2011
| Sample_last_update_date | Jun 16 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Quigen mRNA kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | 3IVT (affymetrix) with a 16hr IVT step
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | Arrays were scanned per the manufacturers specifications for the Affymetrix MOE430v2 chip.
| Sample_data_processing | MAS5 values in the sample data tables with overall intensity targeted to 500. Images were background-subtracted. Probesets were identified as differentially expressed when the absolute fold change was 2. Probesets selected for visualization were log2 transformed and were analyzed with hierarchical clustering (Pearson correlation, average linkage), and visualized with heatmaps to assist in interpretation.
| Sample_platform_id | GPL1261
| Sample_contact_name | Elena,,Ezhkova
| Sample_contact_email | elena.ezhkova@mssm.edu
| Sample_contact_phone | 6468841410
| Sample_contact_department | DRB
| Sample_contact_institute | MSSM
| Sample_contact_address | 1428 Madison Avenue, Atran Building, AB7-10B
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10128
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655116/suppl/GSM655116.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM655nnn/GSM655116/suppl/GSM655116.CHP.gz
| Sample_series_id | GSE26616
| Sample_data_row_count | 45101
| |
|
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