Search results for the GEO ID: GSE26668  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM656393 | GPL1261 |
|
Fz4Fz8 DKO C1
|
E13.5 Fz4+/+Fz8-/- embryonic kidneys sample 1
|
strain: hybrid between C57BL/6, 129X1/SvJ and 129S1/Sv
tissue: whole kidney
developmental stage: E13.5
genotype/variation: Fz4+/+Fz8-/-
|
Gene expression data from whole kidneys at E13.5
|
| Sample_geo_accession | GSM656393
| | Sample_status | Public on Mar 23 2011
| | Sample_submission_date | Jan 18 2011
| | Sample_last_update_date | Apr 21 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | N/A
| | Sample_growth_protocol_ch1 | N/A
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol and RNeasy according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 100ng total RNA
| | Sample_hyb_protocol | Hybridization performed by Johns Hopkins Microarray Core Facility with their standard protocol. Samples were hybridized to Affymetrix MOE430.2 array
| | Sample_scan_protocol | Scanning were performed by Johns Hopkins Microarray Core Facility with their standard protocol
| | Sample_data_processing | Raw data was processed in R2.9.1 using the affy and rma packages from the Bioconductor Project (www.bioconductor.org).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Xin,,Ye
| | Sample_contact_institute | Johns Hopkins School of Medicine
| | Sample_contact_address | 725 N Wolfe Street, PCTB 805
| | Sample_contact_city | Baltimore
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21205
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM656nnn/GSM656393/suppl/GSM656393.CEL.gz
| | Sample_series_id | GSE26668
| | Sample_data_row_count | 45101
| | |
|
GSM656394 | GPL1261 |
|
Fz4Fz8 DKO C2
|
E13.5 Fz4+/+Fz8-/- embryonic kidneys sample 2
|
strain: hybrid between C57BL/6, 129X1/SvJ and 129S1/Sv
tissue: whole kidney
developmental stage: E13.5
genotype/variation: Fz4+/+Fz8-/-
|
Gene expression data from whole kidneys at E13.5
|
| Sample_geo_accession | GSM656394
| | Sample_status | Public on Mar 23 2011
| | Sample_submission_date | Jan 18 2011
| | Sample_last_update_date | Apr 21 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | N/A
| | Sample_growth_protocol_ch1 | N/A
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol and RNeasy according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 100ng total RNA
| | Sample_hyb_protocol | Hybridization performed by Johns Hopkins Microarray Core Facility with their standard protocol. Samples were hybridized to Affymetrix MOE430.2 array
| | Sample_scan_protocol | Scanning were performed by Johns Hopkins Microarray Core Facility with their standard protocol
| | Sample_data_processing | Raw data was processed in R2.9.1 using the affy and rma packages from the Bioconductor Project (www.bioconductor.org).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Xin,,Ye
| | Sample_contact_institute | Johns Hopkins School of Medicine
| | Sample_contact_address | 725 N Wolfe Street, PCTB 805
| | Sample_contact_city | Baltimore
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21205
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM656nnn/GSM656394/suppl/GSM656394.CEL.gz
| | Sample_series_id | GSE26668
| | Sample_data_row_count | 45101
| | |
|
GSM656395 | GPL1261 |
|
Fz4Fz8 DKO C3
|
E13.5 Fz4+/+Fz8-/- embryonic kidneys sample 3
|
strain: hybrid between C57BL/6, 129X1/SvJ and 129S1/Sv
tissue: whole kidney
developmental stage: E13.5
genotype/variation: Fz4+/+Fz8-/-
|
Gene expression data from whole kidneys at E13.5
|
| Sample_geo_accession | GSM656395
| | Sample_status | Public on Mar 23 2011
| | Sample_submission_date | Jan 18 2011
| | Sample_last_update_date | Apr 21 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | N/A
| | Sample_growth_protocol_ch1 | N/A
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol and RNeasy according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 100ng total RNA
| | Sample_hyb_protocol | Hybridization performed by Johns Hopkins Microarray Core Facility with their standard protocol. Samples were hybridized to Affymetrix MOE430.2 array
| | Sample_scan_protocol | Scanning were performed by Johns Hopkins Microarray Core Facility with their standard protocol
| | Sample_data_processing | Raw data was processed in R2.9.1 using the affy and rma packages from the Bioconductor Project (www.bioconductor.org).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Xin,,Ye
| | Sample_contact_institute | Johns Hopkins School of Medicine
| | Sample_contact_address | 725 N Wolfe Street, PCTB 805
| | Sample_contact_city | Baltimore
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21205
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM656nnn/GSM656395/suppl/GSM656395.CEL.gz
| | Sample_series_id | GSE26668
| | Sample_data_row_count | 45101
| | |
|
GSM656396 | GPL1261 |
|
Fz4Fz8 DKO M1
|
E13.5 Fz4-/-Fz8-/- embryonic kidneys sample 1
|
strain: hybrid between C57BL/6, 129X1/SvJ and 129S1/Sv
tissue: whole kidney
developmental stage: E13.5
genotype/variation: Fz4-/-Fz8-/-
|
Gene expression data from whole kidneys at E13.5
|
| Sample_geo_accession | GSM656396
| | Sample_status | Public on Mar 23 2011
| | Sample_submission_date | Jan 18 2011
| | Sample_last_update_date | Apr 21 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | N/A
| | Sample_growth_protocol_ch1 | N/A
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol and RNeasy according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 100ng total RNA
| | Sample_hyb_protocol | Hybridization performed by Johns Hopkins Microarray Core Facility with their standard protocol. Samples were hybridized to Affymetrix MOE430.2 array
| | Sample_scan_protocol | Scanning were performed by Johns Hopkins Microarray Core Facility with their standard protocol
| | Sample_data_processing | Raw data was processed in R2.9.1 using the affy and rma packages from the Bioconductor Project (www.bioconductor.org).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Xin,,Ye
| | Sample_contact_institute | Johns Hopkins School of Medicine
| | Sample_contact_address | 725 N Wolfe Street, PCTB 805
| | Sample_contact_city | Baltimore
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21205
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM656nnn/GSM656396/suppl/GSM656396.CEL.gz
| | Sample_series_id | GSE26668
| | Sample_data_row_count | 45101
| | |
|
GSM656397 | GPL1261 |
|
Fz4Fz8 DKO M2
|
E13.5 Fz4-/-Fz8-/- embryonic kidneys sample 2
|
strain: hybrid between C57BL/6, 129X1/SvJ and 129S1/Sv
tissue: whole kidney
developmental stage: E13.5
genotype/variation: Fz4-/-Fz8-/-
|
Gene expression data from whole kidneys at E13.5
|
| Sample_geo_accession | GSM656397
| | Sample_status | Public on Mar 23 2011
| | Sample_submission_date | Jan 18 2011
| | Sample_last_update_date | Apr 21 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | N/A
| | Sample_growth_protocol_ch1 | N/A
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol and RNeasy according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 100ng total RNA
| | Sample_hyb_protocol | Hybridization performed by Johns Hopkins Microarray Core Facility with their standard protocol. Samples were hybridized to Affymetrix MOE430.2 array
| | Sample_scan_protocol | Scanning were performed by Johns Hopkins Microarray Core Facility with their standard protocol
| | Sample_data_processing | Raw data was processed in R2.9.1 using the affy and rma packages from the Bioconductor Project (www.bioconductor.org).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Xin,,Ye
| | Sample_contact_institute | Johns Hopkins School of Medicine
| | Sample_contact_address | 725 N Wolfe Street, PCTB 805
| | Sample_contact_city | Baltimore
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21205
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM656nnn/GSM656397/suppl/GSM656397.CEL.gz
| | Sample_series_id | GSE26668
| | Sample_data_row_count | 45101
| | |
|
GSM656398 | GPL1261 |
|
Fz4Fz8 DKO M3
|
E13.5 Fz4-/-Fz8-/- embryonic kidneys sample 3
|
strain: hybrid between C57BL/6, 129X1/SvJ and 129S1/Sv
tissue: whole kidney
developmental stage: E13.5
genotype/variation: Fz4-/-Fz8-/-
|
Gene expression data from whole kidneys at E13.5
|
| Sample_geo_accession | GSM656398
| | Sample_status | Public on Mar 23 2011
| | Sample_submission_date | Jan 18 2011
| | Sample_last_update_date | Apr 21 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | N/A
| | Sample_growth_protocol_ch1 | N/A
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol and RNeasy according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 100ng total RNA
| | Sample_hyb_protocol | Hybridization performed by Johns Hopkins Microarray Core Facility with their standard protocol. Samples were hybridized to Affymetrix MOE430.2 array
| | Sample_scan_protocol | Scanning were performed by Johns Hopkins Microarray Core Facility with their standard protocol
| | Sample_data_processing | Raw data was processed in R2.9.1 using the affy and rma packages from the Bioconductor Project (www.bioconductor.org).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Xin,,Ye
| | Sample_contact_institute | Johns Hopkins School of Medicine
| | Sample_contact_address | 725 N Wolfe Street, PCTB 805
| | Sample_contact_city | Baltimore
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21205
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM656nnn/GSM656398/suppl/GSM656398.CEL.gz
| | Sample_series_id | GSE26668
| | Sample_data_row_count | 45101
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