Search results for the GEO ID: GSE27092  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM669396 | GPL1261 |
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GFP negative 1 (biological replica 1)
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P14 TCR cytotoxic T cells
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strain: C57Bl/6
cell type: P14 TCR cytotoxic T cells
genotype/variation: control
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Gene expression data for P14 TCR cytotoxic T cells
|
| Sample_geo_accession | GSM669396
| | Sample_status | Public on Mar 13 2011
| | Sample_submission_date | Feb 04 2011
| | Sample_last_update_date | Mar 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | P14 TCR spleens were disaggregated, activated for 24h with gp33 peptide. Cells were retrovirally infected with GFP-HDAC7 phosphorylation deficient mutant and sorted as GFP negative and GFP positive
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland using GeneChip mouse genome 430_2.0 array (Affimetrix)
| | Sample_hyb_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_scan_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_data_processing | Expression Console (rma pre-processing) and Multiexperiment Viewer software, comparing GFP positive relative to GFP negative
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Maria,N,Navarro
| | Sample_contact_laboratory | DAC
| | Sample_contact_department | Cell Signallig and Immunology
| | Sample_contact_institute | University of Dundee
| | Sample_contact_address | Dow Street
| | Sample_contact_city | DUNDEE
| | Sample_contact_zip/postal_code | DD1 5EH
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669396/suppl/GSM669396.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669396/suppl/GSM669396.chp.gz
| | Sample_series_id | GSE27092
| | Sample_data_row_count | 45101
| | |
|
GSM669397 | GPL1261 |
|
GFP negative 2 (biological replica 2)
|
P14 TCR cytotoxic T cells
|
strain: C57Bl/6
cell type: P14 TCR cytotoxic T cells
genotype/variation: control
|
Gene expression data for P14 TCR cytotoxic T cells
|
| Sample_geo_accession | GSM669397
| | Sample_status | Public on Mar 13 2011
| | Sample_submission_date | Feb 04 2011
| | Sample_last_update_date | Mar 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | P14 TCR spleens were disaggregated, activated for 24h with gp33 peptide. Cells were retrovirally infected with GFP-HDAC7 phosphorylation deficient mutant and sorted as GFP negative and GFP positive
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland using GeneChip mouse genome 430_2.0 array (Affimetrix)
| | Sample_hyb_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_scan_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_data_processing | Expression Console (rma pre-processing) and Multiexperiment Viewer software, comparing GFP positive relative to GFP negative
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Maria,N,Navarro
| | Sample_contact_laboratory | DAC
| | Sample_contact_department | Cell Signallig and Immunology
| | Sample_contact_institute | University of Dundee
| | Sample_contact_address | Dow Street
| | Sample_contact_city | DUNDEE
| | Sample_contact_zip/postal_code | DD1 5EH
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669397/suppl/GSM669397.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669397/suppl/GSM669397.chp.gz
| | Sample_series_id | GSE27092
| | Sample_data_row_count | 45101
| | |
|
GSM669398 | GPL1261 |
|
GFP negative 3 (biological replica 3)
|
P14 TCR cytotoxic T cells
|
strain: C57Bl/6
cell type: P14 TCR cytotoxic T cells
genotype/variation: control
|
Gene expression data for P14 TCR cytotoxic T cells
|
| Sample_geo_accession | GSM669398
| | Sample_status | Public on Mar 13 2011
| | Sample_submission_date | Feb 04 2011
| | Sample_last_update_date | Mar 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | P14 TCR spleens were disaggregated, activated for 24h with gp33 peptide. Cells were retrovirally infected with GFP-HDAC7 phosphorylation deficient mutant and sorted as GFP negative and GFP positive
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland using GeneChip mouse genome 430_2.0 array (Affimetrix)
| | Sample_hyb_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_scan_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_data_processing | Expression Console (rma pre-processing) and Multiexperiment Viewer software, comparing GFP positive relative to GFP negative
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Maria,N,Navarro
| | Sample_contact_laboratory | DAC
| | Sample_contact_department | Cell Signallig and Immunology
| | Sample_contact_institute | University of Dundee
| | Sample_contact_address | Dow Street
| | Sample_contact_city | DUNDEE
| | Sample_contact_zip/postal_code | DD1 5EH
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669398/suppl/GSM669398.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669398/suppl/GSM669398.chp.gz
| | Sample_series_id | GSE27092
| | Sample_data_row_count | 45101
| | |
|
GSM669399 | GPL1261 |
|
GFP positive 1 (biological replica 1)
|
P14 TCR cytotoxic T cells
|
strain: C57Bl/6
cell type: P14 TCR cytotoxic T cells
genotype/variation: HDAC7 phosphorylation deficient mutant
|
Gene expression data for P14 TCR cytotoxic T cells
|
| Sample_geo_accession | GSM669399
| | Sample_status | Public on Mar 13 2011
| | Sample_submission_date | Feb 04 2011
| | Sample_last_update_date | Mar 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | P14 TCR spleens were disaggregated, activated for 24h with gp33 peptide. Cells were retrovirally infected with GFP-HDAC7 phosphorylation deficient mutant and sorted as GFP negative and GFP positive
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland using GeneChip mouse genome 430_2.0 array (Affimetrix)
| | Sample_hyb_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_scan_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_data_processing | Expression Console (rma pre-processing) and Multiexperiment Viewer software, comparing GFP positive relative to GFP negative
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Maria,N,Navarro
| | Sample_contact_laboratory | DAC
| | Sample_contact_department | Cell Signallig and Immunology
| | Sample_contact_institute | University of Dundee
| | Sample_contact_address | Dow Street
| | Sample_contact_city | DUNDEE
| | Sample_contact_zip/postal_code | DD1 5EH
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669399/suppl/GSM669399.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669399/suppl/GSM669399.chp.gz
| | Sample_series_id | GSE27092
| | Sample_data_row_count | 45101
| | |
|
GSM669400 | GPL1261 |
|
GFP positive 2 (biological replica 2)
|
P14 TCR cytotoxic T cells
|
strain: C57Bl/6
cell type: P14 TCR cytotoxic T cells
genotype/variation: HDAC7 phosphorylation deficient mutant
|
Gene expression data for P14 TCR cytotoxic T cells
|
| Sample_geo_accession | GSM669400
| | Sample_status | Public on Mar 13 2011
| | Sample_submission_date | Feb 04 2011
| | Sample_last_update_date | Mar 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | P14 TCR spleens were disaggregated, activated for 24h with gp33 peptide. Cells were retrovirally infected with GFP-HDAC7 phosphorylation deficient mutant and sorted as GFP negative and GFP positive
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland using GeneChip mouse genome 430_2.0 array (Affimetrix)
| | Sample_hyb_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_scan_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_data_processing | Expression Console (rma pre-processing) and Multiexperiment Viewer software, comparing GFP positive relative to GFP negative
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Maria,N,Navarro
| | Sample_contact_laboratory | DAC
| | Sample_contact_department | Cell Signallig and Immunology
| | Sample_contact_institute | University of Dundee
| | Sample_contact_address | Dow Street
| | Sample_contact_city | DUNDEE
| | Sample_contact_zip/postal_code | DD1 5EH
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669400/suppl/GSM669400.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669400/suppl/GSM669400.chp.gz
| | Sample_series_id | GSE27092
| | Sample_data_row_count | 45101
| | |
|
GSM669401 | GPL1261 |
|
GFP positive 3 (biological replica 3)
|
P14 TCR cytotoxic T cells
|
strain: C57Bl/6
cell type: P14 TCR cytotoxic T cells
genotype/variation: HDAC7 phosphorylation deficient mutant
|
Gene expression data for P14 TCR cytotoxic T cells
|
| Sample_geo_accession | GSM669401
| | Sample_status | Public on Mar 13 2011
| | Sample_submission_date | Feb 04 2011
| | Sample_last_update_date | Mar 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | P14 TCR spleens were disaggregated, activated for 24h with gp33 peptide. Cells were retrovirally infected with GFP-HDAC7 phosphorylation deficient mutant and sorted as GFP negative and GFP positive
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Rneasy kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland using GeneChip mouse genome 430_2.0 array (Affimetrix)
| | Sample_hyb_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_scan_protocol | performed by Finnish DNA Microarray Centre at the Centre for Biotechnology, Turku, Finland
| | Sample_data_processing | Expression Console (rma pre-processing) and Multiexperiment Viewer software, comparing GFP positive relative to GFP negative
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Maria,N,Navarro
| | Sample_contact_laboratory | DAC
| | Sample_contact_department | Cell Signallig and Immunology
| | Sample_contact_institute | University of Dundee
| | Sample_contact_address | Dow Street
| | Sample_contact_city | DUNDEE
| | Sample_contact_zip/postal_code | DD1 5EH
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669401/suppl/GSM669401.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM669nnn/GSM669401/suppl/GSM669401.chp.gz
| | Sample_series_id | GSE27092
| | Sample_data_row_count | 45101
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