Search results for the GEO ID: GSE27241  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM673622 | GPL1261 |
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DMSO, WT, biological replicate 1
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DMSO treated wildtype CD4 T cells
|
strain: C57BL/6
genotype/variation: wildtype
treatment: DMSO treated
|
cells cultured under Th17 condition for 48 hours
|
| Sample_geo_accession | GSM673622
| | Sample_status | Public on Mar 28 2011
| | Sample_submission_date | Feb 11 2011
| | Sample_last_update_date | Mar 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Naïve CD4 T cells were FACS sorted and cultured on CD3/CD28 antibodies in RPMI based medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocols
| | Sample_hyb_protocol | According to Affymetrix protocols
| | Sample_scan_protocol | According to Affymetrix protocols
| | Sample_data_processing | GeneSpring GX11.5, RMA, normalized to baseline to median of control (DMSO, WT) samples
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jun,,Huh
| | Sample_contact_email | jun.huh@med.nyu.edu
| | Sample_contact_institute | NYU medical school
| | Sample_contact_address | 540 1st avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM673nnn/GSM673622/suppl/GSM673622.CEL.gz
| | Sample_series_id | GSE27241
| | Sample_data_row_count | 45101
| | |
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GSM673623 | GPL1261 |
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DMSO, KO, biological replicate 1
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DMSO treated RORγt-deficient CD4 T cells
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strain: C57BL/6
genotype/variation: RORγt-deficient
treatment: DMSO treated
|
cells cultured under Th17 condition for 48 hours
|
| Sample_geo_accession | GSM673623
| | Sample_status | Public on Mar 28 2011
| | Sample_submission_date | Feb 11 2011
| | Sample_last_update_date | Mar 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Naïve CD4 T cells were FACS sorted and cultured on CD3/CD28 antibodies in RPMI based medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocols
| | Sample_hyb_protocol | According to Affymetrix protocols
| | Sample_scan_protocol | According to Affymetrix protocols
| | Sample_data_processing | GeneSpring GX11.5, RMA, normalized to baseline to median of control (DMSO, WT) samples
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jun,,Huh
| | Sample_contact_email | jun.huh@med.nyu.edu
| | Sample_contact_institute | NYU medical school
| | Sample_contact_address | 540 1st avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM673nnn/GSM673623/suppl/GSM673623.CEL.gz
| | Sample_series_id | GSE27241
| | Sample_data_row_count | 45101
| | |
|
GSM673624 | GPL1261 |
|
DMSO, WT, biological replicate 2
|
DMSO treated wildtype CD4 T cells
|
strain: C57BL/6
genotype/variation: wildtype
treatment: DMSO treated
|
cells cultured under Th17 condition for 48 hours
|
| Sample_geo_accession | GSM673624
| | Sample_status | Public on Mar 28 2011
| | Sample_submission_date | Feb 11 2011
| | Sample_last_update_date | Mar 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Naïve CD4 T cells were FACS sorted and cultured on CD3/CD28 antibodies in RPMI based medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocols
| | Sample_hyb_protocol | According to Affymetrix protocols
| | Sample_scan_protocol | According to Affymetrix protocols
| | Sample_data_processing | GeneSpring GX11.5, RMA, normalized to baseline to median of control (DMSO, WT) samples
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jun,,Huh
| | Sample_contact_email | jun.huh@med.nyu.edu
| | Sample_contact_institute | NYU medical school
| | Sample_contact_address | 540 1st avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM673nnn/GSM673624/suppl/GSM673624.CEL.gz
| | Sample_series_id | GSE27241
| | Sample_data_row_count | 45101
| | |
|
GSM673625 | GPL1261 |
|
DMSO, KO, biological replicate 2
|
DMSO treated RORγt-deficient CD4 T cells
|
strain: C57BL/6
genotype/variation: RORγt-deficient
treatment: DMSO treated
|
cells cultured under Th17 condition for 48 hours
|
| Sample_geo_accession | GSM673625
| | Sample_status | Public on Mar 28 2011
| | Sample_submission_date | Feb 11 2011
| | Sample_last_update_date | Mar 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Naïve CD4 T cells were FACS sorted and cultured on CD3/CD28 antibodies in RPMI based medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocols
| | Sample_hyb_protocol | According to Affymetrix protocols
| | Sample_scan_protocol | According to Affymetrix protocols
| | Sample_data_processing | GeneSpring GX11.5, RMA, normalized to baseline to median of control (DMSO, WT) samples
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jun,,Huh
| | Sample_contact_email | jun.huh@med.nyu.edu
| | Sample_contact_institute | NYU medical school
| | Sample_contact_address | 540 1st avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM673nnn/GSM673625/suppl/GSM673625.CEL.gz
| | Sample_series_id | GSE27241
| | Sample_data_row_count | 45101
| | |
|
GSM673626 | GPL1261 |
|
digoxin, WT, biological replicate 1
|
Digoxin treated wildtype CD4 T cells
|
strain: C57BL/6
genotype/variation: wildtype
treatment: Digoxin treated
|
cells cultured under Th17 condition for 48 hours
|
| Sample_geo_accession | GSM673626
| | Sample_status | Public on Mar 28 2011
| | Sample_submission_date | Feb 11 2011
| | Sample_last_update_date | Mar 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Naïve CD4 T cells were FACS sorted and cultured on CD3/CD28 antibodies in RPMI based medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocols
| | Sample_hyb_protocol | According to Affymetrix protocols
| | Sample_scan_protocol | According to Affymetrix protocols
| | Sample_data_processing | GeneSpring GX11.5, RMA, normalized to baseline to median of control (DMSO, WT) samples
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jun,,Huh
| | Sample_contact_email | jun.huh@med.nyu.edu
| | Sample_contact_institute | NYU medical school
| | Sample_contact_address | 540 1st avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM673nnn/GSM673626/suppl/GSM673626.CEL.gz
| | Sample_series_id | GSE27241
| | Sample_data_row_count | 45101
| | |
|
GSM673627 | GPL1261 |
|
digoxin, KO, biological replicate 1
|
Digoxin treated RORγt-deficient CD4 T cells
|
strain: C57BL/6
genotype/variation: RORγt-deficient
treatment: Digoxin treated
|
cells cultured under Th17 condition for 48 hours
|
| Sample_geo_accession | GSM673627
| | Sample_status | Public on Mar 28 2011
| | Sample_submission_date | Feb 11 2011
| | Sample_last_update_date | Mar 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Naïve CD4 T cells were FACS sorted and cultured on CD3/CD28 antibodies in RPMI based medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocols
| | Sample_hyb_protocol | According to Affymetrix protocols
| | Sample_scan_protocol | According to Affymetrix protocols
| | Sample_data_processing | GeneSpring GX11.5, RMA, normalized to baseline to median of control (DMSO, WT) samples
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jun,,Huh
| | Sample_contact_email | jun.huh@med.nyu.edu
| | Sample_contact_institute | NYU medical school
| | Sample_contact_address | 540 1st avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM673nnn/GSM673627/suppl/GSM673627.CEL.gz
| | Sample_series_id | GSE27241
| | Sample_data_row_count | 45101
| | |
|
GSM673628 | GPL1261 |
|
digoxin, WT, biological replicate 2
|
Digoxin treated wildtype CD4 T cells
|
strain: C57BL/6
genotype/variation: wildtype
treatment: Digoxin treated
|
cells cultured under Th17 condition for 48 hours
|
| Sample_geo_accession | GSM673628
| | Sample_status | Public on Mar 28 2011
| | Sample_submission_date | Feb 11 2011
| | Sample_last_update_date | Mar 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Naïve CD4 T cells were FACS sorted and cultured on CD3/CD28 antibodies in RPMI based medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocols
| | Sample_hyb_protocol | According to Affymetrix protocols
| | Sample_scan_protocol | According to Affymetrix protocols
| | Sample_data_processing | GeneSpring GX11.5, RMA, normalized to baseline to median of control (DMSO, WT) samples
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jun,,Huh
| | Sample_contact_email | jun.huh@med.nyu.edu
| | Sample_contact_institute | NYU medical school
| | Sample_contact_address | 540 1st avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM673nnn/GSM673628/suppl/GSM673628.CEL.gz
| | Sample_series_id | GSE27241
| | Sample_data_row_count | 45101
| | |
|
GSM673629 | GPL1261 |
|
digoxin, KO, biological replicate 2
|
Digoxin treated RORγt-deficient CD4 T cells
|
strain: C57BL/6
genotype/variation: RORγt-deficient
treatment: Digoxin treated
|
cells cultured under Th17 condition for 48 hours
|
| Sample_geo_accession | GSM673629
| | Sample_status | Public on Mar 28 2011
| | Sample_submission_date | Feb 11 2011
| | Sample_last_update_date | Mar 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Naïve CD4 T cells were FACS sorted and cultured on CD3/CD28 antibodies in RPMI based medium
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocols
| | Sample_hyb_protocol | According to Affymetrix protocols
| | Sample_scan_protocol | According to Affymetrix protocols
| | Sample_data_processing | GeneSpring GX11.5, RMA, normalized to baseline to median of control (DMSO, WT) samples
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jun,,Huh
| | Sample_contact_email | jun.huh@med.nyu.edu
| | Sample_contact_institute | NYU medical school
| | Sample_contact_address | 540 1st avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10016
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM673nnn/GSM673629/suppl/GSM673629.CEL.gz
| | Sample_series_id | GSE27241
| | Sample_data_row_count | 45101
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