Search results for the GEO ID: GSE27378 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM677041 | GPL1261 |
|
Control CD4+ T cells-replicate1
|
Primary CD4+ T cells
|
strain: BALB/c
cell type: primary CD4+ T cells
treatment: control
|
Primary culture from CD4+ T cells
|
Sample_geo_accession | GSM677041
| Sample_status | Public on Dec 01 2011
| Sample_submission_date | Feb 17 2011
| Sample_last_update_date | Dec 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip IVT Labeling Kit according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_hyb_protocol | Affymetrix Eukaryotic Target Hybridization protocol (GeneChip Expression Analysis Technical Manual)
| Sample_scan_protocol | Affymetrix GeneChip Scanner 3000 with GCOS software according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_data_processing | summarization by the mas5 algorithm and RMA normalization using the the R/Bioconductor package affy.
| Sample_platform_id | GPL1261
| Sample_contact_name | Masahiro,,Ono
| Sample_contact_email | m.ono@ucl.ac.uk
| Sample_contact_department | Immunobiology Unit
| Sample_contact_institute | Institute of Child Health
| Sample_contact_address | 30 Guilford Street
| Sample_contact_city | London
| Sample_contact_zip/postal_code | WC1N 1EH
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM677nnn/GSM677041/suppl/GSM677041.CEL.gz
| Sample_series_id | GSE27378
| Sample_data_row_count | 45101
| |
|
GSM677042 | GPL1261 |
|
Control CD4+ T cells-replicate2
|
Primary CD4+ T cells
|
strain: BALB/c
cell type: primary CD4+ T cells
treatment: control
|
Primary culture from CD4+ T cells
|
Sample_geo_accession | GSM677042
| Sample_status | Public on Dec 01 2011
| Sample_submission_date | Feb 17 2011
| Sample_last_update_date | Dec 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip IVT Labeling Kit according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_hyb_protocol | Affymetrix Eukaryotic Target Hybridization protocol (GeneChip Expression Analysis Technical Manual)
| Sample_scan_protocol | Affymetrix GeneChip Scanner 3000 with GCOS software according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_data_processing | summarization by the mas5 algorithm and RMA normalization using the the R/Bioconductor package affy.
| Sample_platform_id | GPL1261
| Sample_contact_name | Masahiro,,Ono
| Sample_contact_email | m.ono@ucl.ac.uk
| Sample_contact_department | Immunobiology Unit
| Sample_contact_institute | Institute of Child Health
| Sample_contact_address | 30 Guilford Street
| Sample_contact_city | London
| Sample_contact_zip/postal_code | WC1N 1EH
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM677nnn/GSM677042/suppl/GSM677042.CEL.gz
| Sample_series_id | GSE27378
| Sample_data_row_count | 45101
| |
|
GSM677043 | GPL1261 |
|
Dorsomorphin-treated CD4+ T cells-replicate1
|
Primary CD4+ T cells
|
strain: BALB/c
cell type: primary CD4+ T cells
treatment: dorsomorphin
|
Primary culture from CD4+ T cells
|
Sample_geo_accession | GSM677043
| Sample_status | Public on Dec 01 2011
| Sample_submission_date | Feb 17 2011
| Sample_last_update_date | Dec 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip IVT Labeling Kit according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_hyb_protocol | Affymetrix Eukaryotic Target Hybridization protocol (GeneChip Expression Analysis Technical Manual)
| Sample_scan_protocol | Affymetrix GeneChip Scanner 3000 with GCOS software according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_data_processing | summarization by the mas5 algorithm and RMA normalization using the the R/Bioconductor package affy.
| Sample_platform_id | GPL1261
| Sample_contact_name | Masahiro,,Ono
| Sample_contact_email | m.ono@ucl.ac.uk
| Sample_contact_department | Immunobiology Unit
| Sample_contact_institute | Institute of Child Health
| Sample_contact_address | 30 Guilford Street
| Sample_contact_city | London
| Sample_contact_zip/postal_code | WC1N 1EH
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM677nnn/GSM677043/suppl/GSM677043.CEL.gz
| Sample_series_id | GSE27378
| Sample_data_row_count | 45101
| |
|
GSM677044 | GPL1261 |
|
Dorsomorphin-treated CD4+ T cells-replicate2
|
Primary CD4+ T cells
|
strain: BALB/c
cell type: primary CD4+ T cells
treatment: dorsomorphin
|
Primary culture from CD4+ T cells
|
Sample_geo_accession | GSM677044
| Sample_status | Public on Dec 01 2011
| Sample_submission_date | Feb 17 2011
| Sample_last_update_date | Dec 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip IVT Labeling Kit according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_hyb_protocol | Affymetrix Eukaryotic Target Hybridization protocol (GeneChip Expression Analysis Technical Manual)
| Sample_scan_protocol | Affymetrix GeneChip Scanner 3000 with GCOS software according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_data_processing | summarization by the mas5 algorithm and RMA normalization using the the R/Bioconductor package affy.
| Sample_platform_id | GPL1261
| Sample_contact_name | Masahiro,,Ono
| Sample_contact_email | m.ono@ucl.ac.uk
| Sample_contact_department | Immunobiology Unit
| Sample_contact_institute | Institute of Child Health
| Sample_contact_address | 30 Guilford Street
| Sample_contact_city | London
| Sample_contact_zip/postal_code | WC1N 1EH
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM677nnn/GSM677044/suppl/GSM677044.CEL.gz
| Sample_series_id | GSE27378
| Sample_data_row_count | 45101
| |
|
GSM677045 | GPL1261 |
|
Control stimulated CD4+ T cells-replicate1
|
Primary CD4+ T cells
|
strain: BALB/c
cell type: primary CD4+ T cells
treatment: stimulated
|
Primary culture from CD4+ T cells
|
Sample_geo_accession | GSM677045
| Sample_status | Public on Dec 01 2011
| Sample_submission_date | Feb 17 2011
| Sample_last_update_date | Dec 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip IVT Labeling Kit according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_hyb_protocol | Affymetrix Eukaryotic Target Hybridization protocol (GeneChip Expression Analysis Technical Manual)
| Sample_scan_protocol | Affymetrix GeneChip Scanner 3000 with GCOS software according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_data_processing | summarization by the mas5 algorithm and RMA normalization using the the R/Bioconductor package affy.
| Sample_platform_id | GPL1261
| Sample_contact_name | Masahiro,,Ono
| Sample_contact_email | m.ono@ucl.ac.uk
| Sample_contact_department | Immunobiology Unit
| Sample_contact_institute | Institute of Child Health
| Sample_contact_address | 30 Guilford Street
| Sample_contact_city | London
| Sample_contact_zip/postal_code | WC1N 1EH
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM677nnn/GSM677045/suppl/GSM677045.CEL.gz
| Sample_series_id | GSE27378
| Sample_data_row_count | 45101
| |
|
GSM677046 | GPL1261 |
|
Control stimulated CD4+ T cells-replicate2
|
Primary CD4+ T cells
|
strain: BALB/c
cell type: primary CD4+ T cells
treatment: stimulated
|
Primary culture from CD4+ T cells
|
Sample_geo_accession | GSM677046
| Sample_status | Public on Dec 01 2011
| Sample_submission_date | Feb 17 2011
| Sample_last_update_date | Dec 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip IVT Labeling Kit according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_hyb_protocol | Affymetrix Eukaryotic Target Hybridization protocol (GeneChip Expression Analysis Technical Manual)
| Sample_scan_protocol | Affymetrix GeneChip Scanner 3000 with GCOS software according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_data_processing | summarization by the mas5 algorithm and RMA normalization using the the R/Bioconductor package affy.
| Sample_platform_id | GPL1261
| Sample_contact_name | Masahiro,,Ono
| Sample_contact_email | m.ono@ucl.ac.uk
| Sample_contact_department | Immunobiology Unit
| Sample_contact_institute | Institute of Child Health
| Sample_contact_address | 30 Guilford Street
| Sample_contact_city | London
| Sample_contact_zip/postal_code | WC1N 1EH
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM677nnn/GSM677046/suppl/GSM677046.CEL.gz
| Sample_series_id | GSE27378
| Sample_data_row_count | 45101
| |
|
GSM677047 | GPL1261 |
|
Dorsomorphin-treated stimulated CD4+ T cells-replicate1
|
Primary CD4+ T cells
|
strain: BALB/c
cell type: primary CD4+ T cells
treatment: stimulated and dorsomorphin
|
Primary culture from CD4+ T cells
|
Sample_geo_accession | GSM677047
| Sample_status | Public on Dec 01 2011
| Sample_submission_date | Feb 17 2011
| Sample_last_update_date | Dec 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip IVT Labeling Kit according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_hyb_protocol | Affymetrix Eukaryotic Target Hybridization protocol (GeneChip Expression Analysis Technical Manual)
| Sample_scan_protocol | Affymetrix GeneChip Scanner 3000 with GCOS software according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_data_processing | summarization by the mas5 algorithm and RMA normalization using the the R/Bioconductor package affy.
| Sample_platform_id | GPL1261
| Sample_contact_name | Masahiro,,Ono
| Sample_contact_email | m.ono@ucl.ac.uk
| Sample_contact_department | Immunobiology Unit
| Sample_contact_institute | Institute of Child Health
| Sample_contact_address | 30 Guilford Street
| Sample_contact_city | London
| Sample_contact_zip/postal_code | WC1N 1EH
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM677nnn/GSM677047/suppl/GSM677047.CEL.gz
| Sample_series_id | GSE27378
| Sample_data_row_count | 45101
| |
|
GSM677048 | GPL1261 |
|
Dorsomorphin-treated stimulated CD4+ T cells-replicate2
|
Primary CD4+ T cells
|
strain: BALB/c
cell type: primary CD4+ T cells
treatment: stimulated and dorsomorphin
|
Primary culture from CD4+ T cells
|
Sample_geo_accession | GSM677048
| Sample_status | Public on Dec 01 2011
| Sample_submission_date | Feb 17 2011
| Sample_last_update_date | Dec 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip IVT Labeling Kit according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_hyb_protocol | Affymetrix Eukaryotic Target Hybridization protocol (GeneChip Expression Analysis Technical Manual)
| Sample_scan_protocol | Affymetrix GeneChip Scanner 3000 with GCOS software according to manufactuer's protocol (GeneChip Expression Analysis Technical Manual)
| Sample_data_processing | summarization by the mas5 algorithm and RMA normalization using the the R/Bioconductor package affy.
| Sample_platform_id | GPL1261
| Sample_contact_name | Masahiro,,Ono
| Sample_contact_email | m.ono@ucl.ac.uk
| Sample_contact_department | Immunobiology Unit
| Sample_contact_institute | Institute of Child Health
| Sample_contact_address | 30 Guilford Street
| Sample_contact_city | London
| Sample_contact_zip/postal_code | WC1N 1EH
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM677nnn/GSM677048/suppl/GSM677048.CEL.gz
| Sample_series_id | GSE27378
| Sample_data_row_count | 45101
| |
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