Search results for the GEO ID: GSE27630 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM684727 | GPL1261 |
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Fourth ventricular choroid plexus from Otx2ko mice at E13, biological replicate 1
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Otx2 deficient mouse strain (Puelles et al., 2003, Nature Neuroscience Vol 6(5))
|
strain background: Mixed background
genotype/variation: Otx2 k.o.
developmental stage: E13
gender: not determined
|
Gene expression data from fourth ventricular choroid plexus of Otx2 k.o. mice
|
Sample_geo_accession | GSM684727
| Sample_status | Public on Feb 05 2013
| Sample_submission_date | Mar 02 2011
| Sample_last_update_date | Feb 05 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | No treatment
| Sample_growth_protocol_ch1 | Animals per housed under spf conditions
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Micro Kit (Qiagen) including DNase treatment
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp Premier labeling kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol (HWS kit)
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | RMA probeset summary and quantile normalisation
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM684nnn/GSM684727/suppl/GSM684727.CEL.gz
| Sample_series_id | GSE27630
| Sample_data_row_count | 45101
| |
|
GSM684728 | GPL1261 |
|
Fourth ventricular choroid plexus from Otx2ko mice at E13, biological replicate 2
|
Otx2 deficient mouse strain (Puelles et al., 2003, Nature Neuroscience Vol 6(5))
|
strain background: Mixed background
genotype/variation: Otx2 k.o.
developmental stage: E13
gender: not determined
|
Gene expression data from fourth ventricular choroid plexus of Otx2 k.o. mice
|
Sample_geo_accession | GSM684728
| Sample_status | Public on Feb 05 2013
| Sample_submission_date | Mar 02 2011
| Sample_last_update_date | Feb 05 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | No treatment
| Sample_growth_protocol_ch1 | Animals per housed under spf conditions
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Micro Kit (Qiagen) including DNase treatment
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp Premier labeling kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol (HWS kit)
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | RMA probeset summary and quantile normalisation
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM684nnn/GSM684728/suppl/GSM684728.CEL.gz
| Sample_series_id | GSE27630
| Sample_data_row_count | 45101
| |
|
GSM684729 | GPL1261 |
|
Fourth ventricular choroid plexus from Otx2ko mice at E13, biological replicate 3
|
Otx2 deficient mouse strain (Puelles et al., 2003, Nature Neuroscience Vol 6(5))
|
strain background: Mixed background
genotype/variation: Otx2 k.o.
developmental stage: E13
gender: not determined
|
Gene expression data from fourth ventricular choroid plexus of Otx2 k.o. mice
|
Sample_geo_accession | GSM684729
| Sample_status | Public on Feb 05 2013
| Sample_submission_date | Mar 02 2011
| Sample_last_update_date | Feb 05 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | No treatment
| Sample_growth_protocol_ch1 | Animals per housed under spf conditions
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Micro Kit (Qiagen) including DNase treatment
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp Premier labeling kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol (HWS kit)
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | RMA probeset summary and quantile normalisation
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM684nnn/GSM684729/suppl/GSM684729.CEL.gz
| Sample_series_id | GSE27630
| Sample_data_row_count | 45101
| |
|
GSM684730 | GPL1261 |
|
Fourth ventricular choroid plexus from Otx2ko mice at E13, biological replicate 4
|
Otx2 deficient mouse strain (Puelles et al., 2003, Nature Neuroscience Vol 6(5))
|
strain background: Mixed background
genotype/variation: Otx2 k.o.
developmental stage: E13
gender: not determined
|
Gene expression data from fourth ventricular choroid plexus of Otx2 k.o. mice
|
Sample_geo_accession | GSM684730
| Sample_status | Public on Feb 05 2013
| Sample_submission_date | Mar 02 2011
| Sample_last_update_date | Feb 05 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | No treatment
| Sample_growth_protocol_ch1 | Animals per housed under spf conditions
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Micro Kit (Qiagen) including DNase treatment
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp Premier labeling kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol (HWS kit)
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | RMA probeset summary and quantile normalisation
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM684nnn/GSM684730/suppl/GSM684730.CEL.gz
| Sample_series_id | GSE27630
| Sample_data_row_count | 45101
| |
|
GSM684731 | GPL1261 |
|
Fourth ventricular choroid plexus from wildtype mice at E13, biological replicate 1
|
Wildtype mice
|
strain background: Mixed background
genotype/variation: Wildtype
developmental stage: E13
gender: not determined
|
Gene expression data from fourth ventricular choroid plexus of wildtype mice
|
Sample_geo_accession | GSM684731
| Sample_status | Public on Feb 05 2013
| Sample_submission_date | Mar 02 2011
| Sample_last_update_date | Feb 05 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | No treatment
| Sample_growth_protocol_ch1 | Animals per housed under spf conditions
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Micro Kit (Qiagen) including DNase treatment
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp Premier labeling kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol (HWS kit)
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | RMA probeset summary and quantile normalisation
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM684nnn/GSM684731/suppl/GSM684731.CEL.gz
| Sample_series_id | GSE27630
| Sample_data_row_count | 45101
| |
|
GSM684732 | GPL1261 |
|
Fourth ventricular choroid plexus from wildtype mice at E13, biological replicate 2
|
Wildtype mice
|
strain background: Mixed background
genotype/variation: Wildtype
developmental stage: E13
gender: not determined
|
Gene expression data from fourth ventricular choroid plexus of wildtype mice
|
Sample_geo_accession | GSM684732
| Sample_status | Public on Feb 05 2013
| Sample_submission_date | Mar 02 2011
| Sample_last_update_date | Feb 05 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | No treatment
| Sample_growth_protocol_ch1 | Animals per housed under spf conditions
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Micro Kit (Qiagen) including DNase treatment
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp Premier labeling kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol (HWS kit)
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | RMA probeset summary and quantile normalisation
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM684nnn/GSM684732/suppl/GSM684732.CEL.gz
| Sample_series_id | GSE27630
| Sample_data_row_count | 45101
| |
|
GSM684733 | GPL1261 |
|
Fourth ventricular choroid plexus from wildtype mice at E13, biological replicate 3
|
Wildtype mice
|
strain background: Mixed background
genotype/variation: Wildtype
developmental stage: E13
gender: not determined
|
Gene expression data from fourth ventricular choroid plexus of wildtype mice
|
Sample_geo_accession | GSM684733
| Sample_status | Public on Feb 05 2013
| Sample_submission_date | Mar 02 2011
| Sample_last_update_date | Feb 05 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | No treatment
| Sample_growth_protocol_ch1 | Animals per housed under spf conditions
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Micro Kit (Qiagen) including DNase treatment
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp Premier labeling kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol (HWS kit)
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | RMA probeset summary and quantile normalisation
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM684nnn/GSM684733/suppl/GSM684733.CEL.gz
| Sample_series_id | GSE27630
| Sample_data_row_count | 45101
| |
|
GSM684734 | GPL1261 |
|
Fourth ventricular choroid plexus from wildtype mice at E13, biological replicate 4
|
Wildtype mice
|
strain background: Mixed background
genotype/variation: Wildtype
developmental stage: E13
gender: not determined
|
Gene expression data from fourth ventricular choroid plexus of wildtype mice
|
Sample_geo_accession | GSM684734
| Sample_status | Public on Feb 05 2013
| Sample_submission_date | Mar 02 2011
| Sample_last_update_date | Feb 05 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | No treatment
| Sample_growth_protocol_ch1 | Animals per housed under spf conditions
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Micro Kit (Qiagen) including DNase treatment
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp Premier labeling kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol (HWS kit)
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | RMA probeset summary and quantile normalisation
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM684nnn/GSM684734/suppl/GSM684734.CEL.gz
| Sample_series_id | GSE27630
| Sample_data_row_count | 45101
| |
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