Search results for the GEO ID: GSE27716 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM686287 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0403
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 68
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686287
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686287/suppl/GSM686287.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686288 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0304
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: male
age at dx: 71
stage grouping: Ib
t stage: 2a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686288
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686288/suppl/GSM686288.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686290 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0106
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: male
age at dx: 74
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686290
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686290/suppl/GSM686290.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686291 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0207
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 80
stage grouping: Ib
t stage: 2a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686291
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686291/suppl/GSM686291.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686292 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC9909
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 86
stage grouping: Ia
t stage: 1b
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686292
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686292/suppl/GSM686292.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686293 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0410
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 65
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686293
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686293/suppl/GSM686293.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686294 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0012
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 70
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686294
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686294/suppl/GSM686294.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686295 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0414
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: male
age at dx: 78
stage grouping: IIIa
t stage: 1b
n stage: 2
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686295
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686295/suppl/GSM686295.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686296 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0415
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: male
age at dx: 63
stage grouping: Ib
t stage: 2a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686296
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686296/suppl/GSM686296.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686297 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0517
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 74
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686297
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686297/suppl/GSM686297.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686298 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0419
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: male
age at dx: 73
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686298
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686298/suppl/GSM686298.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686299 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0423
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: male
age at dx: 61
stage grouping: IIa
t stage: 2a
n stage: 1
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686299
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686299/suppl/GSM686299.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686300 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0028
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 75
stage grouping: IIb
t stage: 3
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686300
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686300/suppl/GSM686300.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686301 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0529
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 67
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686301
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686301/suppl/GSM686301.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686302 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0031
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 67
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686302
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686302/suppl/GSM686302.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686303 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0334
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: male
age at dx: 70
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686303
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686303/suppl/GSM686303.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686304 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0435
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: male
age at dx: 66
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686304
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686304/suppl/GSM686304.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686305 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0437
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 70
stage grouping: Ia
t stage: 1b
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686305
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686305/suppl/GSM686305.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686306 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0538
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 53
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686306
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686306/suppl/GSM686306.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686307 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0540
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 72
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686307
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686307/suppl/GSM686307.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686308 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0541
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 57
stage grouping: Ib
t stage: 2a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686308
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686308/suppl/GSM686308.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686309 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0642
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 67
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686309
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686309/suppl/GSM686309.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686310 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0543
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 79
stage grouping: Ia
t stage: 1b
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686310
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686310/suppl/GSM686310.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686311 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0544
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 73
stage grouping: IIb
t stage: 3
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686311
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686311/suppl/GSM686311.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686312 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0545
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 61
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686312
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686312/suppl/GSM686312.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686313 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0546
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 65
stage grouping: Ib
t stage: 2a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686313
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686313/suppl/GSM686313.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686314 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0647
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 61
stage grouping: IIIa
t stage: 1a
n stage: 2
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686314
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686314/suppl/GSM686314.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686315 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0450
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: male
age at dx: 59
stage grouping: Ib
t stage: 2a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686315
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686315/suppl/GSM686315.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686316 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0411
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 82
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686316
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686316/suppl/GSM686316.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686317 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0413
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: male
age at dx: 90
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686317
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686317/suppl/GSM686317.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686318 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0420
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 88
stage grouping: Ib
t stage: 2a
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686318
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686318/suppl/GSM686318.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686319 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0521
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 62
stage grouping: IIIa
t stage: 2a
n stage: 2
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686319
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686319/suppl/GSM686319.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686320 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0436
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 59
stage grouping: IIIa
t stage: 2a
n stage: 2
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686320
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686320/suppl/GSM686320.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686321 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC9908
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 59
stage grouping: Ib
t stage: 2a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686321
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686321/suppl/GSM686321.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686322 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0516
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 64
stage grouping: Ia
t stage: 1a
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686322
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686322/suppl/GSM686322.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686323 | GPL570 |
|
noninvasive lung adenocarcinoma specimen AC0418
|
Microdissected noninvasive lung tumor
|
tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 73
stage grouping: Ia
t stage: 1b
n stage: 0
|
Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
|
Sample_geo_accession | GSM686323
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686323/suppl/GSM686323.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686324 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0422
|
Microdissected invasive lung tumor
|
tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 63
stage grouping: IIIa
t stage: 4
n stage: 0
|
Gene expression data from human mixed type invasive lung adenocarinoma
|
Sample_geo_accession | GSM686324
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686324/suppl/GSM686324.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
| |
|
GSM686325 | GPL570 |
|
invasive lung adenocarcinoma specimen AC0524
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Microdissected invasive lung tumor
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tissue: lung tumor
pathological type: AdenoCarcinoma-mixed invasive
gender: female
age at dx: 57
stage grouping: Ib
t stage: 2a
n stage: 0
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Gene expression data from human mixed type invasive lung adenocarinoma
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Sample_geo_accession | GSM686325
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686325/suppl/GSM686325.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
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GSM686326 | GPL570 |
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noninvasive lung adenocarcinoma specimen AC0125
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Microdissected noninvasive lung tumor
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tissue: lung tumor
pathological type: BronchioloAlveolar Carcinoma
gender: female
age at dx: 55
stage grouping: Ia
t stage: 1a
n stage: 0
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Gene expression data from human noninvasive lung adenocarinoma tumor (BAC)
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Sample_geo_accession | GSM686326
| Sample_status | Public on Sep 15 2011
| Sample_submission_date | Mar 07 2011
| Sample_last_update_date | Sep 15 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted from laser capture microdissected cells using Rneasy minikit;Qiagen,Valencia,CA
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was generated by the modified Eberwine protocol
| Sample_hyb_protocol | cRNA was hybridized to the Affymetrix(Santa Clara,CA) Human Genome U133 Plus 2.0 Array
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
| Sample_platform_id | GPL570
| Sample_contact_name | Charles,A,Powell
| Sample_contact_email | charles.powell@mssm.edu
| Sample_contact_fax | 212-876-5519
| Sample_contact_department | MEDICINE/PULMONARY
| Sample_contact_institute | Mount Sinai School of Medicine
| Sample_contact_address | One Gustave Levy Place, Box 1232
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10029
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM686nnn/GSM686326/suppl/GSM686326.CEL.gz
| Sample_series_id | GSE27716
| Sample_series_id | GSE27719
| Sample_data_row_count | 54675
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