Search results for the GEO ID: GSE27924  |
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(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM689064 | GPL570 |
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Dif 74P Cl H
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Differentiated iPSC 74P Cl H
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cell line: Dif iPSC 74P Cl H
cell type: fibroblast
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| Sample_geo_accession | GSM689064
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Human iPSC line derived from a 74 year old donor proliferative fibroblasts, re-differentiated into fibroblasts
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_label_protocol_ch1 |
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689064/suppl/GSM689064.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
| | |
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GSM689066 | GPL570 |
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IPSC 96 Cl 1
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Reprogrammed fibroblast into iPSC
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cell line: iPSC 96
cell type: induced pluripotent stem cell
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| Sample_geo_accession | GSM689066
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Human iPSC line derived from a 96 year old donor proliferative fibroblasts
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_label_protocol_ch1 |
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689066/suppl/GSM689066.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
| | |
|
GSM689366 | GPL570 |
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iPSC 74P Cl H
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Reprogrammed fibroblast into iPSC
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cell line: iPSC 74P Cl H
cell type: induced pluripotent stem cell
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| Sample_geo_accession | GSM689366
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Human iPSC line derived from a 74 year old donor proliferative fibroblasts
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689366/suppl/GSM689366.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
| | |
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GSM689383 | GPL570 |
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iPSC 74S Cl F
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Reprogrammed fibroblast into iPSC
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cell line: iPSC 74S Cl F
cell type: induced pluripotent stem cell
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| Sample_geo_accession | GSM689383
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Human iPSC line derived from a 74 year old donor replicative senescent fibroblast
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689383/suppl/GSM689383.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
| | |
|
GSM689384 | GPL570 |
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96
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fibroblasts 96 M
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cell line: 96
cell type: fibroblast
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| Sample_geo_accession | GSM689384
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | 96 year old donor proliferative fibroblasts
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689384/suppl/GSM689384.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
| | |
|
GSM689395 | GPL570 |
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74P
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fibroblasts 74
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cell line: 74P
cell type: fibroblast
|
|
| Sample_geo_accession | GSM689395
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | 74 year old donor proliferative fibroblasts
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689395/suppl/GSM689395.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
| | |
|
GSM689396 | GPL570 |
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74S
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74S
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cell line: 74S
cell type: fibroblast
|
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| Sample_geo_accession | GSM689396
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | 74 year old donor senescent fibroblasts
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689396/suppl/GSM689396.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
| | |
|
GSM689409 | GPL570 |
|
Dif 74S Cl F
|
Differentiated iPSC 74S Cl F
|
cell line: Dif 74S F
cell type: fibroblast
|
|
| Sample_geo_accession | GSM689409
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Human iPSC line derived from a 74 year old donor senescent fibroblasts, re-differentiated into fibroblasts.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689409/suppl/GSM689409.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
| | |
|
GSM689441 | GPL570 |
|
Dif 96 Cl 1
|
Differentiated iPSC 96 Cl1
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cell line: Dif 96 Cl1
cell type: fibroblast
|
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| Sample_geo_accession | GSM689441
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Human iPSC line derived from a 96 year old donor proliferative fibroblasts, re-differentiated into fibroblasts
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689441/suppl/GSM689441.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
| | |
|
GSM689442 | GPL570 |
|
hHFF SM3
|
Post natal fibroblast
|
cell line: HFFSM3
cell type: fibroblast
|
|
| Sample_geo_accession | GSM689442
| | Sample_status | Public on Dec 14 2011
| | Sample_submission_date | Mar 11 2011
| | Sample_last_update_date | Dec 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Human post-natal fibroblasts from a 4 year old donor
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using RNeasy mini kits (Qiagen) according to the manufacturer's instructions and quantified using a NanoDrop spectrophotometer
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Complementary RNA (cRNA) was prepared according to the manufacturer’s (Affymetrix) protocol ‘small sample protocol II’, starting from 100 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
| | Sample_data_processing | Data were analyzed with the GCOS 1.2 software (Affymetrix), using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jean-Marc,,Lemaitre
| | Sample_contact_email | Jean-Marc.Lemaitre@igf.cnrs.fr
| | Sample_contact_institute | INSERM
| | Sample_contact_address | 141 rue de la cardonille
| | Sample_contact_city | Montpellier
| | Sample_contact_zip/postal_code | 34094
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM689nnn/GSM689442/suppl/GSM689442.CEL.gz
| | Sample_series_id | GSE27924
| | Sample_data_row_count | 54675
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