Search results for the GEO ID: GSE27975  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM692133 | GPL1261 |
|
HL-1 cardiomyocyte hypox1
|
HL-1 cardiomyocyte
|
cell line: HL-1
culture: Hypoxia (1% O2)
|
HL-1 cardiomyocyte hypox1
|
| Sample_geo_accession | GSM692133
| | Sample_status | Public on Mar 16 2011
| | Sample_submission_date | Mar 15 2011
| | Sample_last_update_date | Mar 16 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Confluent cells were incubated in hypoxia (1% O2) or normoxia (21% O2) for 8 hours before harvest.
| | Sample_growth_protocol_ch1 | HL-1 cells were grown according to standard protocol, as described in Claycomb WC et. al. Proc Natl Acad Sci U S A 95: 2979-2984, 1998.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN Rneasy Mini Kit, extraction according to protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation,15 ug of biotinylated cRNA were hybridized for 16 hr at 45C MOE430A microarrays according to the standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol (G2500A GeneArray scanner) Standrd Affymetrix protocol, (
| | Sample_data_processing | MAS 5, signal algorithm, global scaling (target intensity 100)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jeanna,C,Perman
| | Sample_contact_email | jeanna.perman@wlab.gu.se
| | Sample_contact_institute | Wallenberg Laboratory for cardiovascular research
| | Sample_contact_address | Bruna Stråket 16
| | Sample_contact_city | Gothenburg
| | Sample_contact_zip/postal_code | 41345
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM692nnn/GSM692133/suppl/GSM692133.CEL.gz
| | Sample_series_id | GSE27975
| | Sample_data_row_count | 45037
| | |
|
GSM692134 | GPL1261 |
|
HL-1 cardiomyocyte hypox2
|
HL-1 cardiomyocyte
|
cell line: HL-1
culture: Hypoxia (1% O2)
|
HL-1 cardiomyocyte hypox2
|
| Sample_geo_accession | GSM692134
| | Sample_status | Public on Mar 16 2011
| | Sample_submission_date | Mar 15 2011
| | Sample_last_update_date | Mar 16 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Confluent cells were incubated in hypoxia (1% O2) or normoxia (21% O2) for 8 hours before harvest.
| | Sample_growth_protocol_ch1 | HL-1 cells were grown according to standard protocol, as described in Claycomb WC et. al. Proc Natl Acad Sci U S A 95: 2979-2984, 1998.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN Rneasy Mini Kit, extraction according to protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation,15 ug of biotinylated cRNA were hybridized for 16 hr at 45C MOE430A microarrays according to the standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol (G2500A GeneArray scanner) Standrd Affymetrix protocol, (
| | Sample_data_processing | MAS 5, signal algorithm, global scaling (target intensity 100)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jeanna,C,Perman
| | Sample_contact_email | jeanna.perman@wlab.gu.se
| | Sample_contact_institute | Wallenberg Laboratory for cardiovascular research
| | Sample_contact_address | Bruna Stråket 16
| | Sample_contact_city | Gothenburg
| | Sample_contact_zip/postal_code | 41345
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM692nnn/GSM692134/suppl/GSM692134.CEL.gz
| | Sample_series_id | GSE27975
| | Sample_data_row_count | 45037
| | |
|
GSM692135 | GPL1261 |
|
HL-1 cardiomyocyte hypox3
|
HL-1 cardiomyocyte
|
cell line: HL-1
culture: Hypoxia (1% O2)
|
HL-1 cardiomyocyte hypox3
|
| Sample_geo_accession | GSM692135
| | Sample_status | Public on Mar 16 2011
| | Sample_submission_date | Mar 15 2011
| | Sample_last_update_date | Mar 16 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Confluent cells were incubated in hypoxia (1% O2) or normoxia (21% O2) for 8 hours before harvest.
| | Sample_growth_protocol_ch1 | HL-1 cells were grown according to standard protocol, as described in Claycomb WC et. al. Proc Natl Acad Sci U S A 95: 2979-2984, 1998.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN Rneasy Mini Kit, extraction according to protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation,15 ug of biotinylated cRNA were hybridized for 16 hr at 45C MOE430A microarrays according to the standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol (G2500A GeneArray scanner) Standrd Affymetrix protocol, (
| | Sample_data_processing | MAS 5, signal algorithm, global scaling (target intensity 100)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jeanna,C,Perman
| | Sample_contact_email | jeanna.perman@wlab.gu.se
| | Sample_contact_institute | Wallenberg Laboratory for cardiovascular research
| | Sample_contact_address | Bruna Stråket 16
| | Sample_contact_city | Gothenburg
| | Sample_contact_zip/postal_code | 41345
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM692nnn/GSM692135/suppl/GSM692135.CEL.gz
| | Sample_series_id | GSE27975
| | Sample_data_row_count | 45037
| | |
|
GSM692136 | GPL1261 |
|
HL-1 cardiomyocyte normox1
|
HL-1 cardiomyocyte
|
cell line: HL-1
culture: Normoxia (21% O2)
|
HL-1 cardiomyocyte normox1
|
| Sample_geo_accession | GSM692136
| | Sample_status | Public on Mar 16 2011
| | Sample_submission_date | Mar 15 2011
| | Sample_last_update_date | Mar 16 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Confluent cells were incubated in hypoxia (1% O2) or normoxia (21% O2) for 8 hours before harvest.
| | Sample_growth_protocol_ch1 | HL-1 cells were grown according to standard protocol, as described in Claycomb WC et. al. Proc Natl Acad Sci U S A 95: 2979-2984, 1998.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN Rneasy Mini Kit, extraction according to protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation,15 ug of biotinylated cRNA were hybridized for 16 hr at 45C MOE430A microarrays according to the standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol (G2500A GeneArray scanner) Standrd Affymetrix protocol, (
| | Sample_data_processing | MAS 5, signal algorithm, global scaling (target intensity 100)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jeanna,C,Perman
| | Sample_contact_email | jeanna.perman@wlab.gu.se
| | Sample_contact_institute | Wallenberg Laboratory for cardiovascular research
| | Sample_contact_address | Bruna Stråket 16
| | Sample_contact_city | Gothenburg
| | Sample_contact_zip/postal_code | 41345
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM692nnn/GSM692136/suppl/GSM692136.CEL.gz
| | Sample_series_id | GSE27975
| | Sample_data_row_count | 45037
| | |
|
GSM692137 | GPL1261 |
|
HL-1 cardiomyocyte normox2
|
HL-1 cardiomyocyte
|
cell line: HL-1
culture: Normoxia (21% O2)
|
HL-1 cardiomyocyte normox2
|
| Sample_geo_accession | GSM692137
| | Sample_status | Public on Mar 16 2011
| | Sample_submission_date | Mar 15 2011
| | Sample_last_update_date | Mar 16 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Confluent cells were incubated in hypoxia (1% O2) or normoxia (21% O2) for 8 hours before harvest.
| | Sample_growth_protocol_ch1 | HL-1 cells were grown according to standard protocol, as described in Claycomb WC et. al. Proc Natl Acad Sci U S A 95: 2979-2984, 1998.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN Rneasy Mini Kit, extraction according to protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation,15 ug of biotinylated cRNA were hybridized for 16 hr at 45C MOE430A microarrays according to the standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol (G2500A GeneArray scanner) Standrd Affymetrix protocol, (
| | Sample_data_processing | MAS 5, signal algorithm, global scaling (target intensity 100)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jeanna,C,Perman
| | Sample_contact_email | jeanna.perman@wlab.gu.se
| | Sample_contact_institute | Wallenberg Laboratory for cardiovascular research
| | Sample_contact_address | Bruna Stråket 16
| | Sample_contact_city | Gothenburg
| | Sample_contact_zip/postal_code | 41345
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM692nnn/GSM692137/suppl/GSM692137.CEL.gz
| | Sample_series_id | GSE27975
| | Sample_data_row_count | 45037
| | |
|
GSM692138 | GPL1261 |
|
HL-1 cardiomyocyte normox3
|
HL-1 cardiomyocyte
|
cell line: HL-1
culture: Normoxia (21% O2)
|
HL-1 cardiomyocyte normox3
|
| Sample_geo_accession | GSM692138
| | Sample_status | Public on Mar 16 2011
| | Sample_submission_date | Mar 15 2011
| | Sample_last_update_date | Mar 16 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Confluent cells were incubated in hypoxia (1% O2) or normoxia (21% O2) for 8 hours before harvest.
| | Sample_growth_protocol_ch1 | HL-1 cells were grown according to standard protocol, as described in Claycomb WC et. al. Proc Natl Acad Sci U S A 95: 2979-2984, 1998.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN Rneasy Mini Kit, extraction according to protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation,15 ug of biotinylated cRNA were hybridized for 16 hr at 45C MOE430A microarrays according to the standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol (G2500A GeneArray scanner) Standrd Affymetrix protocol, (
| | Sample_data_processing | MAS 5, signal algorithm, global scaling (target intensity 100)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jeanna,C,Perman
| | Sample_contact_email | jeanna.perman@wlab.gu.se
| | Sample_contact_institute | Wallenberg Laboratory for cardiovascular research
| | Sample_contact_address | Bruna Stråket 16
| | Sample_contact_city | Gothenburg
| | Sample_contact_zip/postal_code | 41345
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM692nnn/GSM692138/suppl/GSM692138.CEL.gz
| | Sample_series_id | GSE27975
| | Sample_data_row_count | 45037
| | |
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