Result

Search results for the GEO ID: GSE28093

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GSM ID

GPL ID

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Title

Source name

Description

Characteristics

GSM694419

GPL1261

OPC-CG4_1

mouse OPC

cell type: oligodendrocyte precursor cells strain: C57BL6 tissue: brain age: postnatal day 0

Sample_geo_accession	GSM694419
Sample_status	Public on Jun 01 2011
Sample_submission_date	Mar 22 2011
Sample_last_update_date	Jun 01 2011
Sample_type	RNA
Sample_channel_count	1
Sample_organism_ch1	Mus musculus
Sample_taxid_ch1	10090
Sample_growth_protocol_ch1	Oligodendrocyte precursor cells were prepared from postnatal day 0 mouse brain and expanded in serum-free Dulbecco's Modified Eagle's medium (DMEM) medium containing bovine insulin (10 μg/ml), human transferrin (100 μg/ml), BSA (100 μg/ml), progesterone (60 ng/ml), putrescine (16 μg/ml), sodium selenite (40 ng/ml), N-acetylcysteine (60 μg/ml), forskolin (5 μM), PDGF (10 ng/ml), penicillin, streptomycin.
Sample_molecule_ch1	total RNA
Sample_extract_protocol_ch1	Total RNA was prepared using a RNeasy Mini Kit (QIAGEN).
Sample_label_ch1	biotin
Sample_label_protocol_ch1	Five micrograms of total RNA were labeled with biotin by in vitro transcription (IVT) using the One-Cycle Target Labeling procedure for biotin labeling by in vitro transcription (Affymetrix), according to the manufacturer’s instruction.
Sample_hyb_protocol	Labeled probes were used for the GeneChip Mouse Genome 430 2.0 array (Affymetrix) according to the manufacturer’s instructions.
Sample_scan_protocol	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data.
Sample_data_processing	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data. The CEL data were then analyzed with dChip software, which can normalize and process multiple datasets simultaneously.
Sample_platform_id	GPL1261
Sample_contact_name	Toru,,Kondo
Sample_contact_email	tkondo@cdb.riken.jp
Sample_contact_phone	+81-78-306-3170
Sample_contact_fax	+81-78-306-3171
Sample_contact_laboratory	Laboratory for Cell Lineage Modulation
Sample_contact_department	Center for Developmental Biology
Sample_contact_institute	RIKEN
Sample_contact_address	2-2-3, Minatojima-Minamimachi, Chuo-ku
Sample_contact_city	Kobe
Sample_contact_zip/postal_code	650-0047
Sample_contact_country	Japan
Sample_supplementary_file	ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM694nnn/GSM694419/suppl/GSM694419.CEL.gz
Sample_series_id	GSE28093
Sample_data_row_count	45101

GSM694420

GPL1261

OPC-CG4_2

mouse OPC

cell type: oligodendrocyte precursor cells strain: C57BL6 tissue: brain age: postnatal day 0

Sample_geo_accession	GSM694420
Sample_status	Public on Jun 01 2011
Sample_submission_date	Mar 22 2011
Sample_last_update_date	Jun 01 2011
Sample_type	RNA
Sample_channel_count	1
Sample_organism_ch1	Mus musculus
Sample_taxid_ch1	10090
Sample_growth_protocol_ch1	Oligodendrocyte precursor cells were prepared from postnatal day 0 mouse brain and expanded in serum-free Dulbecco's Modified Eagle's medium (DMEM) medium containing bovine insulin (10 μg/ml), human transferrin (100 μg/ml), BSA (100 μg/ml), progesterone (60 ng/ml), putrescine (16 μg/ml), sodium selenite (40 ng/ml), N-acetylcysteine (60 μg/ml), forskolin (5 μM), PDGF (10 ng/ml), penicillin, streptomycin.
Sample_molecule_ch1	total RNA
Sample_extract_protocol_ch1	Total RNA was prepared using a RNeasy Mini Kit (QIAGEN).
Sample_label_ch1	biotin
Sample_label_protocol_ch1	Five micrograms of total RNA were labeled with biotin by in vitro transcription (IVT) using the One-Cycle Target Labeling procedure for biotin labeling by in vitro transcription (Affymetrix), according to the manufacturer’s instruction.
Sample_hyb_protocol	Labeled probes were used for the GeneChip Mouse Genome 430 2.0 array (Affymetrix) according to the manufacturer’s instructions.
Sample_scan_protocol	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data.
Sample_data_processing	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data. The CEL data were then analyzed with dChip software, which can normalize and process multiple datasets simultaneously.
Sample_platform_id	GPL1261
Sample_contact_name	Toru,,Kondo
Sample_contact_email	tkondo@cdb.riken.jp
Sample_contact_phone	+81-78-306-3170
Sample_contact_fax	+81-78-306-3171
Sample_contact_laboratory	Laboratory for Cell Lineage Modulation
Sample_contact_department	Center for Developmental Biology
Sample_contact_institute	RIKEN
Sample_contact_address	2-2-3, Minatojima-Minamimachi, Chuo-ku
Sample_contact_city	Kobe
Sample_contact_zip/postal_code	650-0047
Sample_contact_country	Japan
Sample_supplementary_file	ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM694nnn/GSM694420/suppl/GSM694420.CEL.gz
Sample_series_id	GSE28093
Sample_data_row_count	45101

GSM694421

GPL1261

OPC-FCS_1

mouse OPC

cell type: oligodendrocyte precursor cells strain: C57BL6 tissue: brain age: postnatal day 0

Sample_geo_accession	GSM694421
Sample_status	Public on Jun 01 2011
Sample_submission_date	Mar 22 2011
Sample_last_update_date	Jun 01 2011
Sample_type	RNA
Sample_channel_count	1
Sample_organism_ch1	Mus musculus
Sample_taxid_ch1	10090
Sample_growth_protocol_ch1	Oligodendrocyte precursor cells were prepared from postnatal day 0 mouse brain and expanded in serum-free Dulbecco's Modified Eagle's medium (DMEM) medium containing bovine insulin (10 μg/ml), human transferrin (100 μg/ml), BSA (100 μg/ml), progesterone (60 ng/ml), putrescine (16 μg/ml), sodium selenite (40 ng/ml), N-acetylcysteine (60 μg/ml), forskolin (5 μM), PDGF (10 ng/ml), penicillin, streptomycin.
Sample_molecule_ch1	total RNA
Sample_extract_protocol_ch1	Total RNA was prepared using a RNeasy Mini Kit (QIAGEN).
Sample_label_ch1	biotin
Sample_label_protocol_ch1	Five micrograms of total RNA were labeled with biotin by in vitro transcription (IVT) using the One-Cycle Target Labeling procedure for biotin labeling by in vitro transcription (Affymetrix), according to the manufacturer’s instruction.
Sample_hyb_protocol	Labeled probes were used for the GeneChip Mouse Genome 430 2.0 array (Affymetrix) according to the manufacturer’s instructions.
Sample_scan_protocol	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data.
Sample_data_processing	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data. The CEL data were then analyzed with dChip software, which can normalize and process multiple datasets simultaneously.
Sample_platform_id	GPL1261
Sample_contact_name	Toru,,Kondo
Sample_contact_email	tkondo@cdb.riken.jp
Sample_contact_phone	+81-78-306-3170
Sample_contact_fax	+81-78-306-3171
Sample_contact_laboratory	Laboratory for Cell Lineage Modulation
Sample_contact_department	Center for Developmental Biology
Sample_contact_institute	RIKEN
Sample_contact_address	2-2-3, Minatojima-Minamimachi, Chuo-ku
Sample_contact_city	Kobe
Sample_contact_zip/postal_code	650-0047
Sample_contact_country	Japan
Sample_supplementary_file	ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM694nnn/GSM694421/suppl/GSM694421.CEL.gz
Sample_series_id	GSE28093
Sample_data_row_count	45101

GSM694422

GPL1261

OPC-FCS_2

mouse OPC

cell type: oligodendrocyte precursor cells strain: C57BL6 tissue: brain age: postnatal day 0

Sample_geo_accession	GSM694422
Sample_status	Public on Jun 01 2011
Sample_submission_date	Mar 22 2011
Sample_last_update_date	Jun 01 2011
Sample_type	RNA
Sample_channel_count	1
Sample_organism_ch1	Mus musculus
Sample_taxid_ch1	10090
Sample_growth_protocol_ch1	Oligodendrocyte precursor cells were prepared from postnatal day 0 mouse brain and expanded in serum-free Dulbecco's Modified Eagle's medium (DMEM) medium containing bovine insulin (10 μg/ml), human transferrin (100 μg/ml), BSA (100 μg/ml), progesterone (60 ng/ml), putrescine (16 μg/ml), sodium selenite (40 ng/ml), N-acetylcysteine (60 μg/ml), forskolin (5 μM), PDGF (10 ng/ml), penicillin, streptomycin.
Sample_molecule_ch1	total RNA
Sample_extract_protocol_ch1	Total RNA was prepared using a RNeasy Mini Kit (QIAGEN).
Sample_label_ch1	biotin
Sample_label_protocol_ch1	Five micrograms of total RNA were labeled with biotin by in vitro transcription (IVT) using the One-Cycle Target Labeling procedure for biotin labeling by in vitro transcription (Affymetrix), according to the manufacturer’s instruction.
Sample_hyb_protocol	Labeled probes were used for the GeneChip Mouse Genome 430 2.0 array (Affymetrix) according to the manufacturer’s instructions.
Sample_scan_protocol	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data.
Sample_data_processing	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data. The CEL data were then analyzed with dChip software, which can normalize and process multiple datasets simultaneously.
Sample_platform_id	GPL1261
Sample_contact_name	Toru,,Kondo
Sample_contact_email	tkondo@cdb.riken.jp
Sample_contact_phone	+81-78-306-3170
Sample_contact_fax	+81-78-306-3171
Sample_contact_laboratory	Laboratory for Cell Lineage Modulation
Sample_contact_department	Center for Developmental Biology
Sample_contact_institute	RIKEN
Sample_contact_address	2-2-3, Minatojima-Minamimachi, Chuo-ku
Sample_contact_city	Kobe
Sample_contact_zip/postal_code	650-0047
Sample_contact_country	Japan
Sample_supplementary_file	ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM694nnn/GSM694422/suppl/GSM694422.CEL.gz
Sample_series_id	GSE28093
Sample_data_row_count	45101

GSM694423

GPL1261

OPC-Rev_1

mouse OPC

cell type: oligodendrocyte precursor cells strain: C57BL6 tissue: brain age: postnatal day 0

Sample_geo_accession	GSM694423
Sample_status	Public on Jun 01 2011
Sample_submission_date	Mar 22 2011
Sample_last_update_date	Jun 01 2011
Sample_type	RNA
Sample_channel_count	1
Sample_organism_ch1	Mus musculus
Sample_taxid_ch1	10090
Sample_growth_protocol_ch1	Oligodendrocyte precursor cells were prepared from postnatal day 0 mouse brain and expanded in serum-free Dulbecco's Modified Eagle's medium (DMEM) medium containing bovine insulin (10 μg/ml), human transferrin (100 μg/ml), BSA (100 μg/ml), progesterone (60 ng/ml), putrescine (16 μg/ml), sodium selenite (40 ng/ml), N-acetylcysteine (60 μg/ml), forskolin (5 μM), PDGF (10 ng/ml), penicillin, streptomycin.
Sample_molecule_ch1	total RNA
Sample_extract_protocol_ch1	Total RNA was prepared using a RNeasy Mini Kit (QIAGEN).
Sample_label_ch1	biotin
Sample_label_protocol_ch1	Five micrograms of total RNA were labeled with biotin by in vitro transcription (IVT) using the One-Cycle Target Labeling procedure for biotin labeling by in vitro transcription (Affymetrix), according to the manufacturer’s instruction.
Sample_hyb_protocol	Labeled probes were used for the GeneChip Mouse Genome 430 2.0 array (Affymetrix) according to the manufacturer’s instructions.
Sample_scan_protocol	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data.
Sample_data_processing	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data. The CEL data were then analyzed with dChip software, which can normalize and process multiple datasets simultaneously.
Sample_platform_id	GPL1261
Sample_contact_name	Toru,,Kondo
Sample_contact_email	tkondo@cdb.riken.jp
Sample_contact_phone	+81-78-306-3170
Sample_contact_fax	+81-78-306-3171
Sample_contact_laboratory	Laboratory for Cell Lineage Modulation
Sample_contact_department	Center for Developmental Biology
Sample_contact_institute	RIKEN
Sample_contact_address	2-2-3, Minatojima-Minamimachi, Chuo-ku
Sample_contact_city	Kobe
Sample_contact_zip/postal_code	650-0047
Sample_contact_country	Japan
Sample_supplementary_file	ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM694nnn/GSM694423/suppl/GSM694423.CEL.gz
Sample_series_id	GSE28093
Sample_data_row_count	45101

GSM694424

GPL1261

OPC-Rev_2

mouse OPC

cell type: oligodendrocyte precursor cells strain: C57BL6 tissue: brain age: postnatal day 0

Sample_geo_accession	GSM694424
Sample_status	Public on Jun 01 2011
Sample_submission_date	Mar 22 2011
Sample_last_update_date	Jun 01 2011
Sample_type	RNA
Sample_channel_count	1
Sample_organism_ch1	Mus musculus
Sample_taxid_ch1	10090
Sample_growth_protocol_ch1	Oligodendrocyte precursor cells were prepared from postnatal day 0 mouse brain and expanded in serum-free Dulbecco's Modified Eagle's medium (DMEM) medium containing bovine insulin (10 μg/ml), human transferrin (100 μg/ml), BSA (100 μg/ml), progesterone (60 ng/ml), putrescine (16 μg/ml), sodium selenite (40 ng/ml), N-acetylcysteine (60 μg/ml), forskolin (5 μM), PDGF (10 ng/ml), penicillin, streptomycin.
Sample_molecule_ch1	total RNA
Sample_extract_protocol_ch1	Total RNA was prepared using a RNeasy Mini Kit (QIAGEN).
Sample_label_ch1	biotin
Sample_label_protocol_ch1	Five micrograms of total RNA were labeled with biotin by in vitro transcription (IVT) using the One-Cycle Target Labeling procedure for biotin labeling by in vitro transcription (Affymetrix), according to the manufacturer’s instruction.
Sample_hyb_protocol	Labeled probes were used for the GeneChip Mouse Genome 430 2.0 array (Affymetrix) according to the manufacturer’s instructions.
Sample_scan_protocol	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data.
Sample_data_processing	The microarray image data were processed with the GeneChip Scanner 3000 (Affymetrix) to generate CEL data. The CEL data were then analyzed with dChip software, which can normalize and process multiple datasets simultaneously.
Sample_platform_id	GPL1261
Sample_contact_name	Toru,,Kondo
Sample_contact_email	tkondo@cdb.riken.jp
Sample_contact_phone	+81-78-306-3170
Sample_contact_fax	+81-78-306-3171
Sample_contact_laboratory	Laboratory for Cell Lineage Modulation
Sample_contact_department	Center for Developmental Biology
Sample_contact_institute	RIKEN
Sample_contact_address	2-2-3, Minatojima-Minamimachi, Chuo-ku
Sample_contact_city	Kobe
Sample_contact_zip/postal_code	650-0047
Sample_contact_country	Japan
Sample_supplementary_file	ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM694nnn/GSM694424/suppl/GSM694424.CEL.gz
Sample_series_id	GSE28093
Sample_data_row_count	45101

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