Search results for the GEO ID: GSE28186  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM697735 | GPL1261 |
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Heart_wildtype_rep1
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E9.25 control mouse
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strain: C57BL/6J
genotype/variation: wild type
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1(12-6-4).CEL
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| Sample_geo_accession | GSM697735
| | Sample_status | Public on Mar 26 2011
| | Sample_submission_date | Mar 25 2011
| | Sample_last_update_date | Mar 26 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were housed under a 12 h light/12 h dark cycle and ad-lib access to food and water. Animals were sacrificed by cervical dislocation.
| | Sample_growth_protocol_ch1 | Embryos were grown until embryonic day 9.25.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using RNeasy (QIAgen) was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Fragmented and biotinylated cDNAs were prepared from the total RNA according to NuGEN protocol (FL-Ovation cDNA Biotin Module V2 USER GUIDE Version 04.05.07).
| | Sample_hyb_protocol | cDNAs were hybridized on GeneChip arrays and the arrays were washed and stained in Affymetrix Fluidics Station 450 according to the standard Affymetrix protocol (Expression Analysis Technical Manual P/N 702232 Rev.2).
| | Sample_scan_protocol | GeneChip arrays were scanned using Affymetrix GeneChip 3000 7G scanner. GeneChip arrays were scanned using Affymetrix GeneChip 3000 7G scanner.
| | Sample_data_processing | RMA, Signal calculated by GCOS1.4 software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Keiko,,Uchida
| | Sample_contact_email | uchida@muc.biglobe.ne.jp
| | Sample_contact_institute | Keio University School of Medicine
| | Sample_contact_address | 35 Shinanomachi
| | Sample_contact_city | Shinjuku-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 160-8582
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM697nnn/GSM697735/suppl/GSM697735.CEL.gz
| | Sample_series_id | GSE28186
| | Sample_data_row_count | 45101
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GSM697737 | GPL1261 |
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Heart_wildtype_rep2
|
E9.25 control mouse
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strain: C57BL/6J
genotype/variation: wild type
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2(12-6-5).CEL
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| Sample_geo_accession | GSM697737
| | Sample_status | Public on Mar 26 2011
| | Sample_submission_date | Mar 25 2011
| | Sample_last_update_date | Mar 26 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were housed under a 12 h light/12 h dark cycle and ad-lib access to food and water. Animals were sacrificed by cervical dislocation.
| | Sample_growth_protocol_ch1 | Embryos were grown until embryonic day 9.25.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using RNeasy (QIAgen) was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Fragmented and biotinylated cDNAs were prepared from the total RNA according to NuGEN protocol (FL-Ovation cDNA Biotin Module V2 USER GUIDE Version 04.05.07).
| | Sample_hyb_protocol | cDNAs were hybridized on GeneChip arrays and the arrays were washed and stained in Affymetrix Fluidics Station 450 according to the standard Affymetrix protocol (Expression Analysis Technical Manual P/N 702232 Rev.2).
| | Sample_scan_protocol | GeneChip arrays were scanned using Affymetrix GeneChip 3000 7G scanner. GeneChip arrays were scanned using Affymetrix GeneChip 3000 7G scanner.
| | Sample_data_processing | RMA, Signal calculated by GCOS1.4 software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Keiko,,Uchida
| | Sample_contact_email | uchida@muc.biglobe.ne.jp
| | Sample_contact_institute | Keio University School of Medicine
| | Sample_contact_address | 35 Shinanomachi
| | Sample_contact_city | Shinjuku-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 160-8582
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM697nnn/GSM697737/suppl/GSM697737.CEL.gz
| | Sample_series_id | GSE28186
| | Sample_data_row_count | 45101
| | |
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GSM697738 | GPL1261 |
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Heart_double_knockout_rep1
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E9.25 knockout mouse
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strain: C57BL/6J
genotype/variation: IP3R1−/−IP3R3−/−
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3(12-7-92-3).CEL
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| Sample_geo_accession | GSM697738
| | Sample_status | Public on Mar 26 2011
| | Sample_submission_date | Mar 25 2011
| | Sample_last_update_date | Mar 26 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were housed under a 12 h light/12 h dark cycle and ad-lib access to food and water. Animals were sacrificed by cervical dislocation.
| | Sample_growth_protocol_ch1 | Embryos were grown until embryonic day 9.25.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using RNeasy (QIAgen) was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Fragmented and biotinylated cDNAs were prepared from the total RNA according to NuGEN protocol (FL-Ovation cDNA Biotin Module V2 USER GUIDE Version 04.05.07).
| | Sample_hyb_protocol | cDNAs were hybridized on GeneChip arrays and the arrays were washed and stained in Affymetrix Fluidics Station 450 according to the standard Affymetrix protocol (Expression Analysis Technical Manual P/N 702232 Rev.2).
| | Sample_scan_protocol | GeneChip arrays were scanned using Affymetrix GeneChip 3000 7G scanner. GeneChip arrays were scanned using Affymetrix GeneChip 3000 7G scanner.
| | Sample_data_processing | RMA, Signal calculated by GCOS1.4 software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Keiko,,Uchida
| | Sample_contact_email | uchida@muc.biglobe.ne.jp
| | Sample_contact_institute | Keio University School of Medicine
| | Sample_contact_address | 35 Shinanomachi
| | Sample_contact_city | Shinjuku-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 160-8582
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM697nnn/GSM697738/suppl/GSM697738.CEL.gz
| | Sample_series_id | GSE28186
| | Sample_data_row_count | 45101
| | |
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GSM697740 | GPL1261 |
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Heart_double_knockout_rep2
|
E9.25 knockout mouse
|
strain: C57BL/6J
genotype/variation: IP3R1−/−IP3R3−/−
|
4(12-7-92-5).CEL
|
| Sample_geo_accession | GSM697740
| | Sample_status | Public on Mar 26 2011
| | Sample_submission_date | Mar 25 2011
| | Sample_last_update_date | Mar 26 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were housed under a 12 h light/12 h dark cycle and ad-lib access to food and water. Animals were sacrificed by cervical dislocation.
| | Sample_growth_protocol_ch1 | Embryos were grown until embryonic day 9.25.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using RNeasy (QIAgen) was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Fragmented and biotinylated cDNAs were prepared from the total RNA according to NuGEN protocol (FL-Ovation cDNA Biotin Module V2 USER GUIDE Version 04.05.07).
| | Sample_hyb_protocol | cDNAs were hybridized on GeneChip arrays and the arrays were washed and stained in Affymetrix Fluidics Station 450 according to the standard Affymetrix protocol (Expression Analysis Technical Manual P/N 702232 Rev.2).
| | Sample_scan_protocol | GeneChip arrays were scanned using Affymetrix GeneChip 3000 7G scanner. GeneChip arrays were scanned using Affymetrix GeneChip 3000 7G scanner.
| | Sample_data_processing | RMA, Signal calculated by GCOS1.4 software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Keiko,,Uchida
| | Sample_contact_email | uchida@muc.biglobe.ne.jp
| | Sample_contact_institute | Keio University School of Medicine
| | Sample_contact_address | 35 Shinanomachi
| | Sample_contact_city | Shinjuku-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 160-8582
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM697nnn/GSM697740/suppl/GSM697740.CEL.gz
| | Sample_series_id | GSE28186
| | Sample_data_row_count | 45101
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