Search results for the GEO ID: GSE28476  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM703788 | GPL570 |
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Pool of 62 normal adrenal glands
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AD_CTL
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tissue: Normal adrenal glands
tumor secretion profile: None
genotype: WT CTNNB1
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Pool of total RNA from adrenal glands of 62 caucasian subjects aged 15 to 61 years old
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| Sample_geo_accession | GSM703788
| | Sample_status | Public on Apr 09 2011
| | Sample_submission_date | Apr 08 2011
| | Sample_last_update_date | Apr 09 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Human Genome U133 Plus 2.0 GeneCHIP.
| | Sample_scan_protocol | GeneChips were scanned using the Genechip scanner 3000 workstation (Affymetrix)
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | julien,,durand
| | Sample_contact_email | juliend667@gmail.com
| | Sample_contact_phone | 514-890-8000
| | Sample_contact_department | Biomedicale Science
| | Sample_contact_institute | CRCHUM
| | Sample_contact_address | 3840 Rue Saint-Urbain
| | Sample_contact_city | Montreal
| | Sample_contact_state | QC
| | Sample_contact_zip/postal_code | H2W 1T8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM703nnn/GSM703788/suppl/GSM703788_AD_CTL.CEL.gz
| | Sample_series_id | GSE28476
| | Sample_data_row_count | 54675
| | |
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GSM703789 | GPL570 |
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Adrenocortical adenoma with CTNNB1 mutation (S45P)
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M AA S45P
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tissue: Adrenocortical adenoma
tumor secretion profile: Cortisol
genotype: CTNNB1 mutation (S45P)
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Gene expression profile of an adrenocortical adenoma with a S45P CTNNB1 mutation
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| Sample_geo_accession | GSM703789
| | Sample_status | Public on Apr 09 2011
| | Sample_submission_date | Apr 08 2011
| | Sample_last_update_date | Apr 09 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Human Genome U133 Plus 2.0 GeneCHIP.
| | Sample_scan_protocol | GeneChips were scanned using the Genechip scanner 3000 workstation (Affymetrix)
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | julien,,durand
| | Sample_contact_email | juliend667@gmail.com
| | Sample_contact_phone | 514-890-8000
| | Sample_contact_department | Biomedicale Science
| | Sample_contact_institute | CRCHUM
| | Sample_contact_address | 3840 Rue Saint-Urbain
| | Sample_contact_city | Montreal
| | Sample_contact_state | QC
| | Sample_contact_zip/postal_code | H2W 1T8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM703nnn/GSM703789/suppl/GSM703789_M_AA_S45P.CEL.gz
| | Sample_series_id | GSE28476
| | Sample_data_row_count | 54675
| | |
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GSM703790 | GPL570 |
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Adrenocortical adenoma with CTNNB1 mutation (T41A)
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M AA T41A
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tissue: Adrenocortical adenoma
tumor secretion profile: Aldosterone
genotype: CTNNB1 mutation (T41A)
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Gene expression profile of an adrenocortical adenoma with a S37C CTNNB1 mutation
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| Sample_geo_accession | GSM703790
| | Sample_status | Public on Apr 09 2011
| | Sample_submission_date | Apr 08 2011
| | Sample_last_update_date | Apr 09 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Human Genome U133 Plus 2.0 GeneCHIP.
| | Sample_scan_protocol | GeneChips were scanned using the Genechip scanner 3000 workstation (Affymetrix)
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | julien,,durand
| | Sample_contact_email | juliend667@gmail.com
| | Sample_contact_phone | 514-890-8000
| | Sample_contact_department | Biomedicale Science
| | Sample_contact_institute | CRCHUM
| | Sample_contact_address | 3840 Rue Saint-Urbain
| | Sample_contact_city | Montreal
| | Sample_contact_state | QC
| | Sample_contact_zip/postal_code | H2W 1T8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM703nnn/GSM703790/suppl/GSM703790_M_AA_T41A.CEL.gz
| | Sample_series_id | GSE28476
| | Sample_data_row_count | 54675
| | |
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GSM703791 | GPL570 |
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Adrenocortical adenoma with CTNNB1 mutation_(S37C)
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M AA S37C
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tissue: Adrenocortical adenoma
tumor secretion profile: Cortisol
genotype: CTNNB1 mutation (S37C)
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Gene expression profile of an adrenocortical adenoma with a T41A CTNNB1 mutation
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| Sample_geo_accession | GSM703791
| | Sample_status | Public on Apr 09 2011
| | Sample_submission_date | Apr 08 2011
| | Sample_last_update_date | Apr 09 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Human Genome U133 Plus 2.0 GeneCHIP.
| | Sample_scan_protocol | GeneChips were scanned using the Genechip scanner 3000 workstation (Affymetrix)
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | julien,,durand
| | Sample_contact_email | juliend667@gmail.com
| | Sample_contact_phone | 514-890-8000
| | Sample_contact_department | Biomedicale Science
| | Sample_contact_institute | CRCHUM
| | Sample_contact_address | 3840 Rue Saint-Urbain
| | Sample_contact_city | Montreal
| | Sample_contact_state | QC
| | Sample_contact_zip/postal_code | H2W 1T8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM703nnn/GSM703791/suppl/GSM703791_M_AA_S37C.CEL.gz
| | Sample_series_id | GSE28476
| | Sample_data_row_count | 54675
| | |
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GSM703792 | GPL570 |
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Adrenocortical adenoma with wild-type CTNNB1-1
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WT AA 1
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tissue: Adrenocortical adenoma
tumor secretion profile: Cortisol
genotype: WT CTNNB1
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Gene expression profile of an adrenocortical adenoma with wild-type CTNNB1 gene
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| Sample_geo_accession | GSM703792
| | Sample_status | Public on Apr 09 2011
| | Sample_submission_date | Apr 08 2011
| | Sample_last_update_date | Apr 09 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Human Genome U133 Plus 2.0 GeneCHIP.
| | Sample_scan_protocol | GeneChips were scanned using the Genechip scanner 3000 workstation (Affymetrix)
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | julien,,durand
| | Sample_contact_email | juliend667@gmail.com
| | Sample_contact_phone | 514-890-8000
| | Sample_contact_department | Biomedicale Science
| | Sample_contact_institute | CRCHUM
| | Sample_contact_address | 3840 Rue Saint-Urbain
| | Sample_contact_city | Montreal
| | Sample_contact_state | QC
| | Sample_contact_zip/postal_code | H2W 1T8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM703nnn/GSM703792/suppl/GSM703792_WT_AA_1.CEL.gz
| | Sample_series_id | GSE28476
| | Sample_data_row_count | 54675
| | |
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GSM703793 | GPL570 |
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Adrenocortical adenoma with wild-type CTNNB1-2
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WT AA 2
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tissue: Adrenocortical adenoma
tumor secretion profile: Cortisol
genotype: WT CTNNB1
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Gene expression profile of an adrenocortical adenoma with wild-type CTNNB1 gene
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| Sample_geo_accession | GSM703793
| | Sample_status | Public on Apr 09 2011
| | Sample_submission_date | Apr 08 2011
| | Sample_last_update_date | Apr 09 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Human Genome U133 Plus 2.0 GeneCHIP.
| | Sample_scan_protocol | GeneChips were scanned using the Genechip scanner 3000 workstation (Affymetrix)
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | julien,,durand
| | Sample_contact_email | juliend667@gmail.com
| | Sample_contact_phone | 514-890-8000
| | Sample_contact_department | Biomedicale Science
| | Sample_contact_institute | CRCHUM
| | Sample_contact_address | 3840 Rue Saint-Urbain
| | Sample_contact_city | Montreal
| | Sample_contact_state | QC
| | Sample_contact_zip/postal_code | H2W 1T8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM703nnn/GSM703793/suppl/GSM703793_WT_AA_2.CEL.gz
| | Sample_series_id | GSE28476
| | Sample_data_row_count | 54675
| | |
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GSM703794 | GPL570 |
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Adrenocortical adenoma with wild-type CTNNB1-3
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WT AA 3
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tissue: Adrenocortical adenoma
tumor secretion profile: Cortisol
genotype: WT CTNNB1
|
Gene expression profile of an adrenocortical adenoma with wild-type CTNNB1 gene
|
| Sample_geo_accession | GSM703794
| | Sample_status | Public on Apr 09 2011
| | Sample_submission_date | Apr 08 2011
| | Sample_last_update_date | Apr 09 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Human Genome U133 Plus 2.0 GeneCHIP.
| | Sample_scan_protocol | GeneChips were scanned using the Genechip scanner 3000 workstation (Affymetrix)
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | julien,,durand
| | Sample_contact_email | juliend667@gmail.com
| | Sample_contact_phone | 514-890-8000
| | Sample_contact_department | Biomedicale Science
| | Sample_contact_institute | CRCHUM
| | Sample_contact_address | 3840 Rue Saint-Urbain
| | Sample_contact_city | Montreal
| | Sample_contact_state | QC
| | Sample_contact_zip/postal_code | H2W 1T8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM703nnn/GSM703794/suppl/GSM703794_WT_AA_3.CEL.gz
| | Sample_series_id | GSE28476
| | Sample_data_row_count | 54675
| | |
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GSM703795 | GPL570 |
|
Adrenocortical adenoma with wild-type CTNNB1-4
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WT AA 4
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tissue: Adrenocortical adenoma
tumor secretion profile: Aldosterone
genotype: WT CTNNB1
|
Gene expression profile of an adrenocortical adenoma with wild-type CTNNB1 gene
|
| Sample_geo_accession | GSM703795
| | Sample_status | Public on Apr 09 2011
| | Sample_submission_date | Apr 08 2011
| | Sample_last_update_date | Apr 09 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Human Genome U133 Plus 2.0 GeneCHIP.
| | Sample_scan_protocol | GeneChips were scanned using the Genechip scanner 3000 workstation (Affymetrix)
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | julien,,durand
| | Sample_contact_email | juliend667@gmail.com
| | Sample_contact_phone | 514-890-8000
| | Sample_contact_department | Biomedicale Science
| | Sample_contact_institute | CRCHUM
| | Sample_contact_address | 3840 Rue Saint-Urbain
| | Sample_contact_city | Montreal
| | Sample_contact_state | QC
| | Sample_contact_zip/postal_code | H2W 1T8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM703nnn/GSM703795/suppl/GSM703795_WT_AA_4.CEL.gz
| | Sample_series_id | GSE28476
| | Sample_data_row_count | 54675
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