Sample_geo_accession | GSM707557
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Sample_status | Public on Apr 22 2011
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Sample_submission_date | Apr 13 2011
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Sample_last_update_date | Apr 22 2011
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Sample_type | RNA
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Sample_channel_count | 1
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Sample_organism_ch1 | Mus musculus
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Sample_taxid_ch1 | 10090
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Sample_molecule_ch1 | total RNA
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Sample_extract_protocol_ch1 | RNeasy Micro Kit (QIAGEN).
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Sample_label_ch1 | Biotin
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Sample_label_protocol_ch1 | Biotin-labeled cRNA were prepared according to the standard one-cycle target labelling protocol (Affymetrix) with 2.5 μg of total RNA.
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Sample_hyb_protocol | Hybridization was performed with the GeneChip Mouse Genome 430 2.0 array (Affymetrix) according to the manufacturer's protocol.
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Sample_scan_protocol | The GeneChip was scanned with the GeneChip Scanner 3000 (Affymetrix) following the manufacturer's instructions.
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Sample_data_processing | Values were normalized with the MAS5 (GCOS 1.4) algorithm, using the default analysis settings and global scaling as normalization method. The resulting value of mean target intensity (TGT) was 111.55.
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Sample_platform_id | GPL1261
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Sample_contact_name | Hitoshi,,Okamura
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Sample_contact_email | okamurah@pharm.kyoto-u.ac.jp
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Sample_contact_department | Department of Systems Biology
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Sample_contact_institute | Kyoto University, Graduate School of Pharmaceutical Sciences
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Sample_contact_address | 46-29 Yoshida-Shimo-Adachi-cho, Sakyo-ku
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Sample_contact_city | Kyoto
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Sample_contact_zip/postal_code | 606-8501
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Sample_contact_country | Japan
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Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM707nnn/GSM707557/suppl/GSM707557.CEL.gz
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Sample_series_id | GSE28574
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Sample_data_row_count | 45101
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