Search results for the GEO ID: GSE28887  |
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(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM715818 | GPL1261 |
|
old-B6-B1a-PEC-1
|
mouse peritoneal cavity
|
strain: C57BL/6
gender: female
age: older than 15 months
tissue source: peritoneal cavity
cell type: B1 cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715818
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715818/suppl/GSM715818.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715819 | GPL1261 |
|
old-B6-FO-spl-1
|
mouse spleen
|
strain: C57BL/6
gender: female
age: older than 15 months
tissue source: spleen
cell type: Follicular B cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715819
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715819/suppl/GSM715819.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715820 | GPL1261 |
|
young-B6-B1a-PEC-1
|
mouse peritoneal cavity
|
strain: C57BL/6
gender: female
age: 8 weeks
tissue source: peritoneal cavity
cell type: B1 cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715820
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715820/suppl/GSM715820.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715821 | GPL1261 |
|
old-B6-ABC-spl-1
|
mouse spleen
|
strain: C57BL/6
gender: female
age: older than 15 months
tissue source: spleen
cell type: Age associated B cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715821
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715821/suppl/GSM715821.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715822 | GPL1261 |
|
old-B6-B1a-PEC-2
|
mouse peritoneal cavity
|
strain: C57BL/6
gender: female
age: older than 15 months
tissue source: peritoneal cavity
cell type: B1 cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715822
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715822/suppl/GSM715822.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715823 | GPL1261 |
|
old-B6-FO-spl-2
|
mouse spleen
|
strain: C57BL/6
gender: female
age: older than 15 months
tissue source: spleen
cell type: Follicular B cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715823
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715823/suppl/GSM715823.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715824 | GPL1261 |
|
young-B6-B1a-PEC-2
|
mouse peritoneal cavity
|
strain: C57BL/6
gender: female
age: 8 weeks
tissue source: peritoneal cavity
cell type: B1 cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715824
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715824/suppl/GSM715824.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715825 | GPL1261 |
|
old-B6-ABC-spl-2
|
mouse spleen
|
strain: C57BL/6
gender: female
age: older than 15 months
tissue source: spleen
cell type: Age associated B cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715825
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715825/suppl/GSM715825.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715826 | GPL1261 |
|
old-B6-B1a-PEC-3
|
mouse peritoneal cavity
|
strain: C57BL/6
gender: female
age: older than 15 months
tissue source: peritoneal cavity
cell type: B1 cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715826
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715826/suppl/GSM715826.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715827 | GPL1261 |
|
old-B6-FO-spl-3
|
mouse spleen
|
strain: C57BL/6
gender: female
age: older than 15 months
tissue source: spleen
cell type: Follicular B cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715827
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715827/suppl/GSM715827.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715828 | GPL1261 |
|
young-B6-B1a-PEC-3
|
mouse peritoneal cavity
|
strain: C57BL/6
gender: female
age: 8 weeks
tissue source: peritoneal cavity
cell type: B1 cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715828
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715828/suppl/GSM715828.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
|
GSM715829 | GPL1261 |
|
old-B6-ABC-spl-3
|
mouse spleen
|
strain: C57BL/6
gender: female
age: older than 15 months
tissue source: spleen
cell type: Age associated B cells
|
Gene expression profile of different B cell populations in old mice
|
| Sample_geo_accession | GSM715829
| | Sample_status | Public on Apr 28 2011
| | Sample_submission_date | Apr 27 2011
| | Sample_last_update_date | Apr 28 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were sorted from cell suspension using flow cytometry technique
| | Sample_growth_protocol_ch1 | Cells were sorted directly from mouse organs (no culture was performed)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was isolated using picoPure RNA isolation kit (Arcturus)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were background corrected with the RMA algorithm using R and the Bioconductor's affy package. All parameters were set at its default settings
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Anatoly,V,Rubtsov
| | Sample_contact_email | rubtsova@njhealth.org
| | Sample_contact_institute | National Jewish Health
| | Sample_contact_address | 1400 Jackson St
| | Sample_contact_city | Denver
| | Sample_contact_zip/postal_code | 80206
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM715nnn/GSM715829/suppl/GSM715829.CEL.gz
| | Sample_series_id | GSE28887
| | Sample_data_row_count | 45037
| | |
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